1.Isolation and Identification of a Quail-origin H9N2 Subtype of The Influenza Virus and Its Biologic Characterization.
Yang YU ; Weiying SI ; Zhuangchuan YUAN ; Yan YAN ; Jiyong ZHOU
Chinese Journal of Virology 2016;32(1):70-76
A quail-origin subtype of the influenza virus was isolated from a human-infecting H7N9 subtype of the avian influenza virus found in a live poultry market and was given the name A/Quail/Hangzhou/1/ 2013 (H9N2). We analyzed the whole genome of this virus and its biologic characteristics. Sequence analyses suggested that the: HA and NS genes belonged to a CK/BJ/1/94-like lineage; NA, NP, PA and PB1 genes belonged to a SH/F/98-like lineage; M and PB2 genes belonged to a G1-like lineage. Analyses of key amino acids showed that the cleavage site in HA protein was PSRSSR ↓ GL, and that the HA protein had a human receptor-binding site with Leu226. Deletion of amino acids 69 - 73 was detected in the stalk of NA protein, the M2 protein had an Asn31 mutation, and the NS1 protein had two mutations at Ser42, Ala149. The intravenous pathogenicity of this virus was 0.36. A study in chickens suggested that all inoculated birds shed the virus from the trachea and cloaca on the third day post-infection (p. i. ) until 11 days. All chickens that had direct contact shed the virus on the second day p. i. until 8 days. Results of virus reisolation suggested that lung and tracheal tissues could shed the virus in 5 days, whereas the other organs could shed the virus in 3 days. These results suggest that this virus strain is H9N2 subtype LPAIV, whose lineage is prevalent in mainland China. This research provides evidence on how to monitor and prevent the H9N2 subtype of the avian influenza virus.
Animals
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Chick Embryo
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Chickens
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China
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Genotype
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Influenza A Virus, H9N2 Subtype
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classification
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genetics
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isolation & purification
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Influenza in Birds
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virology
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Phylogeny
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Quail
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virology
2.Characterization of genome of A/Guangzhou/333/99(H9N2) virus.
YuanJi GUO ; Jianping XIE ; Kunyu WU ; Jie DONG ; Min WANG ; Ye ZHANG ; Junfeng GUO ; Jiming CHEN ; Zhifing CHEN ; Zi LI
Chinese Journal of Experimental and Clinical Virology 2002;16(2):142-145
BACKGROUNDTo understand the characterization of genome of a strain of avian influenza A H9N2 virus repeatedly isolated from a child with influenza illness. Thereafter to reveal the origin of this H9N2 virus.
METHODSViruses were passed in embryonated hen eggs and virion RNA was extracted from allantoic fluid and reverse transcribed to synthesize cDNA. cDNA was amplified by PCR and the PCR product was purified with a purification kit. Afterwards RNA sequence analysis was performed by dideoxynucleotide chain termination and a cloning method. Finally, phylogenetic analysis of the sequencing data was performed with MegAlign (Version 1.03) and Editseg (Version 3.69) softwares.
RESULTSGenome of A/Guangzhou/333/99 (H9N2) virus was closely related to avian influenza A H9N2 virus, but obvious difference from that of A/Duck/Hong Kong/Y439/97(H9N2) virus, as well as its genome did not include any RNA segment derived from human influenza A virus. However, the genes encoding the HA,NA,NP and NS proteins of A/Guangzhou/333/99 virus were derived from those of G9 lineage virus, the rest genes encoding the M and three polymerase (PB2,PB1 and PA) proteins were derived from G1 lineage strain.
CONCLUSIONSA/Guangzhou/333/99 virus was a reassortant derived from reassortment betweenG9 and G1 lineages of avian influenzaA(H9N2) viruses. Therefore, the most possibility is that it is derived from avian influenza A virus directly. The results do not only demonstrate that avian influenza A (H9N2) virus could infect men, but also firstly prove that the genetic reassortment could be occurred between different genetic lineages of avian influenza A (H9N2) viruses in the nature.
Animals ; Base Sequence ; Chick Embryo ; Child ; Genome, Viral ; Humans ; Influenza A Virus, H9N2 Subtype ; Influenza A virus ; genetics ; Influenza, Human ; virology ; Phylogeny
3.Characterization of internal genes of two strains of influenza A (H9N2) virus isolated from men.
Yuan-ji GUO ; Le-ying WEN ; Min WANG ; Jun-feng GUO ; Ye ZHANG ; Zi LI
Chinese Journal of Experimental and Clinical Virology 2003;17(3):225-228
BACKGROUNDTo understand the characteristics of internal genes of two strains of influenza A(H9N2) virus isolated from men and on the basis of these to reveal the origin of these two strains of influenza A(H9N2)virus.
METHODSThe target gene was amplified by RT-PCR,the PCR product was ligated with P GEM-T Vector (Promega Company, USA) at 4 degrees, the recombined plasmid was transferred into dH5a bacteria, and the positive colonies were selected and identified with restriction enzyme. Afterwards, they were sent to Liu He Tong Company in Beijing for nucleotide sequencing. Finally, phylogenetic analysis of the sequencing data was performed with MegAlign (version 1.03)and Editseq (Version 3.69) softwares.
RESULTSInternal genes of the two strains of H9N2 virus were G9 lineage. There was a slight difference in nucleotide sequence in PA gene between the two strains, whereas another five gene segments were identical to each other.
CONCLUSIONThe genomes of the two strains of influenza A(H9N2)virus were G9 lineage.They were transmitted to men separately from different avian sources with different characteristics of gene of influenza A(H9N2) virus, respectively.
Animals ; Chick Embryo ; China ; Humans ; Influenza A Virus, H9N2 Subtype ; classification ; genetics ; isolation & purification ; Influenza, Human ; virology ; Phylogeny ; Viral Proteins ; genetics
4.Pathogenicity of an FAdV-4 isolate to chickens and its genomic analysis.
Kai-Kun MO ; Chen-Fei LYU ; Shang-Shang CAO ; Xia LI ; Gang XING ; Yan YAN ; Xiao-Juan ZHENG ; Min LIAO ; Ji-Yong ZHOU
Journal of Zhejiang University. Science. B 2019;20(9):740-752
Fowl adenovirus serotype 4 (FAdV-4) strain SD1511 was isolated from chickens with severe inclusion body hepatitis and hydropericardium syndrome in Shandong Province, China. The isolate was cultured in primary chicken embryo kidney cells. A study of pathogenicity indicated that SD1511 readily infected 7-35-d-old chickens by intramuscular injection and intranasal and oral routes, causing 50%-100% mortality. The 35-d-old chickens suffered more severe infection than 7- and 21-d-old chickens with mortality highest in the intramuscular injection group. The serum from surviving chickens showed potent viral neutralizing capability. The complete genome of SD1511 was sequenced and analyzed. The strain was found to belong to the FAdV-4 cluster with more than 99% identity with the virulent FAdV-4 strains isolated in China in recent years except for some distinct variations, including deletions of open reading frame 27 (ORF27), ORF48, and part of ORF19. Our findings suggest that SD1511 might be used as a prototype strain for the study of pathogenesis and vaccine development.
Animals
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Antibodies, Neutralizing
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Aviadenovirus/pathogenicity*
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Cell Line
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Chick Embryo/virology*
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Chickens/virology*
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China
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Gene Deletion
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Genetic Variation
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Genome
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Genome, Viral
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Genomics
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Kidney/virology*
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Liver/virology*
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Open Reading Frames
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Poultry Diseases/virology*
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Serogroup
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Viral Load
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Virulence
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Virus Diseases/virology*
5.Survival of avirulent thermostable Newcastle disease virus (strain I-2)in raw, baked, oiled, and cooked white rice at ambient temperatures.
Philemon Nyangi WAMBURA ; Joanne MEERS ; Peter SPRADBROW
Journal of Veterinary Science 2007;8(3):303-305
Raw white rice has not been considered a good carrierfor oral vaccination, probably because of its antiviralactivity. Methods are required to overcome antiviralactivity in raw white rice. This study was carried out todetermine the effects of various treatments of raw whiterice on the survival of strain I-2 of Newcastle diseasevirus. These included cooking and baking the rice ormixing the rice with vegetable oil prior to coating withvaccine virus. The vaccine-coated rice was then stored for30min and 24h, followed by quantitative recovery of thevirus. Thirty min after mixing, uncooked, cooked, andbaked rice, and rice mixed with vegetable oil showed titersof 10(6.2), 10(7.2), 10(6.6), and 10(7.0) EID50/0.1ml, respectively.After storage for 24h at 22-25oC, the titers dropped to10(5.0), 10(6.5), 10(5.0), and 10(6.0) EID50/0.1ml for uncooked,cooked, baked, and oiled rice, respectively.
Animals
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Chick Embryo
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Chickens
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Cookery
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Newcastle Disease/*virology
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Newcastle disease virus/growth & development/*physiology
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Oryza sativa/chemistry/*virology
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Viral Vaccines/chemistry
6.Correlation between TCID50 and p27 antigen of avian leukosis virus subgroup J.
Xuan DONG ; Juan LIU ; Peng ZHAO ; Shuai SU ; Yan DU ; Xue LI ; Zhi-Zhong CUI
Chinese Journal of Virology 2011;27(6):521-525
To study the correlation between 50% tissue-culture infective dose (TCID50) value and p27 antigen S/P value of Avian leukosis virus subgroup J and discuss their significance, chicken embryo fibroblast (CEF) cells were inoculated with Avian leukosis virus subgroup J strain NX0101 and samples were tested continuously for ten days after changing maintenance media. The correlation between TCID50 and p27 antigen S/P value of ten days were then analysized. Simultaneously, DF-1 cells were inoculated with NX0101 and passaged to 20 generations. Samples taken from 1st generation, 5th generation, 10th generation, 15th generation and 20th generation were tested for the TCID50 titer and the p27 antigen S/P value separately. A significant Pearson correlation was found between them in CEF cells (r = 0.85277; P < 0.0001) and in DF-1 cells (r = 0.93000; P = 0.0220). This study provided an important parameter for predicting TCID50 by detecting the p27 antigen S/P value.
Animals
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Avian Leukosis
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virology
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Avian Leukosis Virus
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immunology
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pathogenicity
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Chick Embryo
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Fibroblasts
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virology
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Proliferating Cell Nuclear Antigen
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analysis
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immunology
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Viral Load
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immunology
7.The virus isolation analysis of the H5N1 subtype human avain influenza cases in mainland China from 2005 to 2009.
Shu-mei ZOU ; Ye ZHANG ; Zi LI ; Jie DONG ; Xin-sheng ZHAO ; Li-bo DONG ; Le-ying WEN ; Cui-ling XU ; Min WANG ; Jun-feng GUO ; He-jiang WEI ; Rong-bao GAO ; Xiu-ping WANG ; Yue-long SHU
Chinese Journal of Experimental and Clinical Virology 2009;23(6):409-411
OBJECTIVETo analyse the correlation between the virus isolation and the specimen collection of the H5N1 human high pathogenic avain influenza cases in Mainland China.
METHODSThe specimens were collected in Mainland China from 2005.10 to 2009.3 and the H5N1 viruses were isolated by passage in embryonated chicken eggs.
RESULTSMost specimens were obtained within 14 days after disease onset. For the specimens collected within 7 days, the isolation rate was relatively high and the difference of the positive rate between different years was lower than those specimens collected after 7 days. Most of the samples in our study were collected from the upper or lower respiratory tract with few from blood, feces, et al. The isolation rate of lower respiratory specimens was higher and the difference of the positive rate between different years was relatively lower than those from upper respiratory specimens.
CONCLUSIONWe suggest that the samples should be collected from lower respiratory tract during the acute phase to get the higher isolation rate.
Animals ; Chick Embryo ; China ; epidemiology ; Humans ; Influenza A Virus, H5N1 Subtype ; classification ; genetics ; isolation & purification ; Influenza, Human ; epidemiology ; virology ; Respiratory System ; virology
8.Effects of Newcastle disease virus on the mitochondria of human gastric carcinoma BGC-823 cells.
Kai-Yang LIU ; Jian-Guo QU ; Jin-Jun LIU ; Fang LIU
Chinese Journal of Experimental and Clinical Virology 2008;22(3):198-200
OBJECTIVETo explore changes in structure and function of the mitochondria of human gastric carcinoma BGC-823 cells after Newcastle disease virus (NDV) infection.
METHODSElectron microscopy was applied to observe the structure of mitochondria; Rhodamine 123 staining was used to determine the mitochondrial membrane potential; the activity of Na(+)-K(+)-ATPase and Ca(2+)-ATPase were also determined and the release of cytochrome C was detected by Western blotting.
RESULTSThe structure of mitochondria in the tumor cells infected with NDV changed distinctly. In the infected group the activity of mitochondrial Na(+)-K(+)-ATPase and Ca(2+)-ATPase significantly declined (P < 0.01), and compared with control cells, mitochondrial trans-membrane potential was decreased. NDV infection induced the decrease of cytochrome C levels.
CONCLUSIONThe effects of NDV infection on the structure and functions of mitochondria of human gastric carcinoma BGC-823 cells might play a role in the oncolysis of NDV.
Animals ; Carcinoma ; enzymology ; metabolism ; virology ; Cell Line, Tumor ; Chick Embryo ; Cytochromes c ; metabolism ; Humans ; Membrane Potential, Mitochondrial ; Mitochondria ; enzymology ; metabolism ; virology ; Newcastle Disease ; enzymology ; metabolism ; virology ; Newcastle disease virus ; physiology ; Sodium-Potassium-Exchanging ATPase ; metabolism ; Stomach Neoplasms ; enzymology ; metabolism ; virology
9.Establishment of reverse genetics system for class I NDV08-004 strain.
Yun-Xia CHEN ; Hua-Lei LIU ; Feng GUAN ; Dong-Xia ZHENG ; Yun-Ling ZHAO ; Zhi-Liang WANG
Chinese Journal of Virology 2012;28(5):496-500
Based on the genomic sequence of NDV08-004 strain (GenBank accession number FJ794269), seven pairs of primers were designed to amplify the genomic fragments by RT-PCR and cloned into pGEM-Teasy vector. The fragments (named A to G) were sub-cloned into transcription vector pOLTV5 according to the universal RE site and the plasmid named NDV08-004-pO which contained the full length cDNA of NDV08-004 strain was constructed. Three helper plasmids (pCI-NP, pCI-P and pCI-L) together with NDV08-004-pO were co-transfected into BSR T7/5 cells, and the transfection supernatant was inoculated into SPF embryonated eggs to rescue the virus. The virus was rescued successfully and identified by HA and RT-PCR and sequencing. The rescue system constructed in this study provided a good foundation for the further related research.
Animals
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Base Sequence
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Chick Embryo
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Genetic Vectors
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genetics
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Molecular Sequence Data
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Newcastle Disease
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virology
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Newcastle disease virus
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genetics
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Plasmids
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Reverse Genetics
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methods
10.Construction and rescue of infectious cDNA clone of pigeon-origin Newcastle disease virus strain JS/07/04/Pi.
Yan-Mei ZHU ; Zeng-Lei HU ; Qing-Qing SONG ; Zhi-Qiang DUAN ; Min GU ; Shun-Lin HU ; Xiao-Quan WANG ; Xiu-Fan LIU
Chinese Journal of Virology 2012;28(1):67-72
Based on the complete genome sequence of pigeon-origin Newcastle disease virus strain JS/07/04/ Pi(genotype VIb), nine overlapped fragments covering its full-length genome were amplified by RT-PCR. The fragments were connected sequentially and then inserted into the transcription vector TVT7/R resulting in the TVT/071204 which contained the full genome of strain JS/07/04/Pi. The TVT/071204 was co-transfected with three helper plasmids pCI-NP, pCI-P and pCI-L into the BSR cells, and the transfected cells and culture supernatant were inoculated into 9-day-old SPF embryonated eggs 60 h post-transfection. The HA and HI tests were conducted following the death of embryonated eggs. The results showed that the allantoic fluids obtained were HA positive and the HA could be inhibited by anti-NDV serum which indicated that the strain JS/07/04/Pi was rescued successfully. The rescued virus rNDV/071204 showed similar growth kinetics to its parental virus in CEF. The successful recovery of this strain would contribute to the understanding of the host-specificity of pigeon-origin NDV and to the development of the novel vaccines against the NDV infection in pigeons.
Animals
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Base Sequence
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CHO Cells
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Chick Embryo
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Columbidae
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virology
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Cricetinae
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Cricetulus
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DNA, Complementary
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genetics
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Fluorescent Antibody Technique, Indirect
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Molecular Sequence Data
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Newcastle disease virus
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genetics
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growth & development