1.Design and development of the multi-dimensional ultrasonic reconstruction and visualization system.
Liu YANG ; Minghao PENG ; Li RAO ; Kai MAO ; Changqiong ZHENG
Journal of Biomedical Engineering 2009;26(4):878-882
The design and development of multi-dimensional ultrasonic reconstruction and visualization system (MURVS) have been described in the present paper. This system is basically composed of four modules: the data input/output module, image segmentation and arrangement module, multi-dimensional reconstruction module, and the dynamic visualization module. At first, some algorithms used in the system are introduced by the authors, including the AVI segmentation algorithm, three-dimensional interpolation algorithm, and volume rendering algorithms. Then the key questions of techniques to be discussed are: how to design the main modules, how to solve the dynamic visualization problem, and how to implement the system. The experiments indicate that MURVS is able to reconstruct all three-dimensional data fields in one cardiac cycle of a patient within 4 seconds, and dynamically display the motion of the heart. It allows the medical professionals to select different parameters when observing the reconstructed results. This is very helpful for medical professionals to reach more accurate diagnoses of their patients' diseases.
Adult
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Algorithms
;
Echocardiography, Three-Dimensional
;
methods
;
Female
;
Humans
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Image Processing, Computer-Assisted
;
methods
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Mitral Valve Stenosis
;
diagnostic imaging
2.Synthesis of glucose laurate monoester catalyzed by Candida antarctica lipase B-displaying Pichia pastoris whole-cells.
Suiping ZHENG ; Changqiong REN ; Shuangyan HAN ; Ying LIN
Chinese Journal of Biotechnology 2009;25(12):1933-1939
We developed a new enzymatic-catalyzing producing process of glucose laurate monoester. In the process we used Candida antarctica lipase B-displaying Pichia pastoris whole-cells as biocatalyst, glucose as the acyl acceptor and lauric acid as the acyl donor. The product glucose laurate monoester was purified by silica gel column chromatography and preparative liquid chromatography, and identified by liquid chromatography-mass spectrometry. Then we optimized the process from various aspects, such as solvent composition, ratio of dmethyl sulfoxide to 2-Methyl-2-butanol (V/V), catalyst dosage, substrate concentration, water activity and temperature. The optimal reaction conditions were: glucose 0.5 mmol/L, lauric acid 1.0 mmol/L, ratio of 2-Methyl-2-butanol to Dmethyl sulfoxide is 7:3 in 5 mL volume, temperature 60 degrees C, the best initial water activity of whole-cells biocatalyst is 0.11. The maximum glucose conversion could be 48.7% after 72 h.
Biocatalysis
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Candida
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enzymology
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Esters
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chemistry
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metabolism
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Fungal Proteins
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Genetic Engineering
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Glucose
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chemistry
;
metabolism
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Laurates
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chemistry
;
metabolism
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Lipase
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biosynthesis
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genetics
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Pichia
;
genetics
;
metabolism
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Recombinant Proteins
;
biosynthesis
;
genetics
3.Quantitative functional evaluation on right ventricle with auto-segmentation and three-dimensional reconstruction.
Liu YANG ; Li RAO ; Changqiong ZHENG ; Jie HU ; Jiliu ZHOU ; Minghao PENG
Journal of Biomedical Engineering 2008;25(2):285-290
The authors first segment the right ventricle regions from the echocardiographics by introducig a seeded region growth algorithm. Then they reconstrunct the three dimensional data field of right ventricle by using rotary scanning interpolation algorithm. And then, the authors propose a layer-by-layer, row-by-row, and voxel-by-voxel approach based on the interpolation results to estimate the volume of right ventricle. Finally, some right ventricle functional parameters such as EDV (End-diastolic volume), ESV (End-systolic volume), and RVEF (Right ventricular ejection fraction) are computed according to the volume results. The volume variation curves of several patients during a cardiac cycle have been successfully plotted out. The obtained results are compared with those from Tomtec medial image workstation. The comparison indicates the proposed approach is practical and meaningful.
Algorithms
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Echocardiography, Three-Dimensional
;
instrumentation
;
methods
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Heart Ventricles
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diagnostic imaging
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Humans
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Image Processing, Computer-Assisted
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Ventricular Dysfunction, Right
;
diagnostic imaging
;
physiopathology
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Ventricular Function, Right
4.Computer-aided diagnosis of fatty liver based on ultrasonic images.
Xiaoyi WANG ; Jiangli LIN ; Deyu LI ; Tianfu WANG ; Changqiong ZHENG ; Yinrong CHENG
Journal of Biomedical Engineering 2006;23(4):726-729
This study aims to provide a computer-aided method for the diagnosis of fatty liver by B-scan ultrasonic imaging. Fatty liver is referred to the infiltration of triglycerides and other fats of the liver cells, which affected the texture of liver tissue. In this paper, some features including mean intensity ratio, as well as angular second moment, entropy and inverse differential moment of gray level co-occurrence matrix were extracted from B-scan ultrasonic liver images. Feature vectors which indicated two classes of images were created with the four features. Then we used kappa-means clustering algorithm, self-organized feature mapping (SOFM) artificial neural network and back-propagation (BP) artificial neural network to classify these vectors. The accuracy rate of kappa-means clustering algorithm was 100% for normal liver and 63.6% for fatty liver. The results of SOFM neural network showed that the accuracy rate was 84.8% for normal liver and 90.9% for fatty liver. The accuracy rate of neural network was 100% both for normal liver and fatty liver. This technology could detect the characteristics of B-scan images of normal liver and fatty liver more accurately. It could greatly improve the accuracy of the diagnosis of fatty liver.
Diagnosis, Differential
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Fatty Liver
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diagnostic imaging
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Humans
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Image Processing, Computer-Assisted
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methods
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Lung
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diagnostic imaging
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Neural Networks (Computer)
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Sensitivity and Specificity
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Ultrasonography
5.A method based on image processing and analyzing technology for estimating the activity of mesenchymal stem cells.
Lizhe XIE ; Jiang WU ; Deyu LI ; Jiangli LIN ; Tianfu WANG ; Changqiong ZHENG
Journal of Biomedical Engineering 2006;23(2):279-281
Cell culture is one of the usual methods for studying living cell and tissue, the method presented in this paper is based on image processing and analyzing technology for activity estimation of mesenchymal stem cells (MSCs). The existing activity estimation methods are costly, complex and invasive. In this method, thresholding is used to preprocess image and to separate out the growth hallow. Then the area is calculated by counting the pixels of the growth hallow. The changes of the activity estimated by this method are similar to those by corresponding cellular experiments. Compared with the existing methods in biology, medicine or medical cellular science, this method is easier, faster, cost-effective and non-invasive. The proposed method has been proved to be efficient by primary experiments of MSCs.
Animals
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Cells, Cultured
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Femur
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cytology
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Image Processing, Computer-Assisted
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methods
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Mesenchymal Stromal Cells
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cytology
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Rats
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Rats, Sprague-Dawley
6.Dynamic three-dimensional reconstruction of tissue Doppler ultrasound heart images.
Aijun HE ; Changqiong ZHENG ; Tianfu WANG ; Deyu LI ; Lixue YIN ; Yi ZHENG
Journal of Biomedical Engineering 2005;22(3):570-574
Traditional 3D ultrasound reconstruction system can just depict 3D anatomical structure, so it is very difficult to give an accurate assessment of the functionality of the heart. In this study, a dynamic 3D reconstruction method of tissue Doppler ultrasound heart images is set up based on the combination of 3D reconstruction and tissue Doppler imaging technique. Dynamic 3D acceleration field of heart movement is reconstructed to supply a new approach of accurate assessment of functionality of the heart. The key problem of vector interpolation and fusion imaging in the process of acceleration vector field reconstruction is solved. The 3D acceleration field of heart movement and anatomical structure is reconstructed separately from the original tissue Doppler acceleration images and showed in the same field. The experimental results testified that the 3D space relationship of acceleration and anatomical structure is correct and this method can supply more information for the assessment of heart functionality.
Echocardiography, Doppler
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Heart
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anatomy & histology
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Humans
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Image Processing, Computer-Assisted
;
Movement
7.A feasibility study on use of surface and interface properties for evaluating hemocompatibility of carbonaceous biomaterials.
Bogang LI ; Anfu KANG ; Guangfua YIN ; Changqiong ZHENG
Journal of Biomedical Engineering 2005;22(3):452-455
In order to evaluate diamond like carbon film (DLC), DLC containing Si, graphite, diamond film (DF), low temperature isotropic carbon film (LTIC) and SiC, we investigated the correlations between surface energy parameters and hemocompatibility indices such as kinetic clotting time, hemolysis and platelet consumption. An analysis of T-type correlation degree in the Grey system theory was performed. The results showed: (1) all of correlation degrees between kinetic clotting time and polar surface energy parameters were positive, but for critical surface tension, the correlation degree was negative; among five of surface energy parameters, interface tension had the highest relation degree (0.63) with kinetic clotting time, and critical surface tension (-0.43) took the second place; (2) on the contrary, all of correlation degrees between hemolysis and polar surface energy parameters were negative, but for critical surface tension, the correlation degree was positive; and that which had closer correlations with hemolysis were still interface tension (-0.43) and critical surface tension (0.29); (3) critical surface tension had the highest relation degree (0.68) with platelet consumption, and surface tension (0.32) took the second place; (4) kinetic clotting time possessed higher negative correlation degrees with hemolysis (-0.57) and platelet consumption (-0.36). These data indicate that kinetic clotting time depended on a balance between the polarity of surface and the limited humidifying of water on the surface, and that platelet consumption was based on good humidification and power polarity of surface, while hemolysis was promoted by the aid of chromatic dispersion action stemming from the surface and fully humidifying of water on the surface. There was "seesaw effect" between kinetic clotting time and hemolysis or platelet consumption, hence the hemocompatibility of carbonaceous biomaterials could be equivalently evaluated by using kinetic clotting time as an index. It has been confirmed: (1) successive occurrences, including adhesion, deformation and collection of platelets on the material surfaces as results of protein adsorption, are the major mechanism of blood coagulation of carbonaceous materials; (2) the hemocompatibility of carbonaceous biomaterials can be evaluated by using critical surface tension as an index. These findings may underpin the hemocompatibility evaluation of carbonaceous biomaterials based on surface properties.
Adsorption
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Biocompatible Materials
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chemistry
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Blood Platelets
;
cytology
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Carbon
;
chemistry
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Diamond
;
chemistry
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Feasibility Studies
;
Graphite
;
chemistry
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Hemolysis
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Platelet Adhesiveness
;
Surface Properties
8.Recommendations for mitral regurgtitation with Doppler echocardiography.
Xiangrong CHANG ; Deyu LI ; Jiangli LIN ; Changqiong ZHENG ; Li RAO ; Hong TANG ; Tianfu WANG
Journal of Biomedical Engineering 2005;22(6):1279-1282
Mitral regurgitation is one of the most serious heart diseases. With the development of up-to-date medical techniques, the ratio of successful operations in valvular repair and valvular replacement has been largely improved. Examinations before operation become extremely crucial. Accurate method is required in assessing the degree of mitral regurgitation to set down the corresponding treatment method. This paper reviews the evaluation methods of mitral valvular regurgitation provided in these years and presents comments on the application areas as well as the merits and disadvantages of those methods. Finally, the prospect of the method based on three-dimensional Doppler ultrasonographic imaging on mitral regurgitation is discussed.
Echocardiography, Doppler, Color
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Echocardiography, Three-Dimensional
;
Humans
;
Image Processing, Computer-Assisted
;
Mitral Valve Insufficiency
;
diagnostic imaging
9.Estimation of fetal weight on the basis of neural network.
Jun WU ; Taizhu YANG ; Jiangli LIN ; Hong LUO ; Deyu LI ; Tianfu WANG ; Changqiong ZHENG
Journal of Biomedical Engineering 2005;22(5):922-929
The ultrasonic estimation of fetal weight at delivery is of important prognostic significance in obstetrical practice. The convertional regression formulas used for estimating fetal weight have the disadvantage of less reliability. In this study, we used the back propagation neural network (BP) to estimate Fetal Weight. Some input variables were adopted in constructing the BP model: biparietal diameter (BPD), cerebellum transverse diameter (TCD), abdominal circumference (AC), liver length (LL), femur length (FL), fetal thigh soft tissue thickness (FSTT), and gestational age (GA). The fetal weights of 109 singleton fetuses were estimated. In the training group and validation group, coincidence rates were 89.77% and 76.19% respectively. The results show that the estimation based on neural network is more accurate than that by regression method. GA, its unit is not week but day in our formulas, is very valuable in combination with other ultrasonic parameters on estimation.
Anthropometry
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methods
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Birth Weight
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Female
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Fetal Weight
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Gestational Age
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Humans
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Infant, Newborn
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Neural Networks (Computer)
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Pregnancy
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Regression Analysis
;
Term Birth
10.Automatic Segmentation of Echocardiography Based on a Morphological Reconstruction Algorithm
Xianhua SHEN ; Deyu LI ; Jiangli LIN ; Tianfu WANG ; Xiaohui WEN ; Changqiong ZHENG ; Li RAO ; Hong TANG
Space Medicine & Medical Engineering 2005;18(4):246-250
Objective To improve the precision of the traditional segmentation of echocardiogram, by suppressing the influence from inherent speckle noises in medical ultrasonic images. Method An automatic segmentation method based on reconstructed morphology was proposed in this paper. First, the opening and closing operations by reconstruction were imposed to the ultrasonic image. Second, the top-hat operation was used to extract the bright and/or dark features and to find out the boundaries corresponding to these features, whereby implemented the automatic segmentation. Result The segmented echocardiogram had less artificial boundaries resulted from speckle noise, and could accurately be extracted the artery and ventricle. Conclusion The presented method can detect both dark and bright objects accurately, and the boundary has a fine continuity. In addition, the algorithm is also applicable to the extraction of sole bright/dark features, accordingly to reduce the complexity and time needed and to improve the accuracy.
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