1.Isolation and characterization of cellulose degrading ability in Paenibacillus isolates from landfill leachate
Patric Chua Tze Chiena ; Hye-Seung Yoo ; Gary A. Dykes ; Sui Mae Lee
Malaysian Journal of Microbiology 2015;11(2):185-194
Aims: Cellulases are enzymes that convert cellulose into glucose molecules, and are produced by various
microorganisms in the environment. Due to their importance to the biofuel industry, there is a need to screen for more
efficient varieties of cellulases. In this study, leachate samples from a landfill site were screened for cellulolytic bacteria.
Methodology and results: Leachate samples obtained from a landfill collection pond were cultured in an enriched
cellulose medium. Two cellulolytic isolates, designated MAEPY1 and MAEPY2, were isolated and further characterized.
Phenotypic profiles and phylogenetic analyses using sequences of 16S rRNA, gyrB and whole genome suggested that
these isolates are new strains of the Paenibacillus genera. The crude enzyme extracts from both isolates have cellulose
degradation activity at approximately 0.1-0.2 IU/mg under working conditions of pH 6 and 55 °C. Assays using other
lignocellulosic substrates showed that the crude enzyme extracts also have high xylan degradation activity.
Conclusion, significance and impact of study: Paenibacillus sp. are known to produce multiple enzymes for
lignocellulolytic degradation and the present results suggest that isolates described in this study, MAEPY1 and
MAEPY2, are excellent candidates deserving further study as potential producers of efficient cellulases for use in
industries associated with cellulosic biomass.
Cellulases
2.Enhancement of cellulolytic enzymes and xylanase production via classical mutational techniques under solid-state fermentation condition
Tai Wan Yi ; Lee Chee Keong ; Darah Ibrahim2
Malaysian Journal of Microbiology 2016;12(1):91-101
Aims: High cost of cellulases remains the most significant barrier to the economical production of bio-ethanol from
lignocellulosic biomass (LB). The present study aims at developing a local cellulolytic fungal strain through random
mutagenesis coupled with the feasibility of solid-state fermentation (SSF) by utilizing agricultural wastes such as oil palm
frond (OPF) as the substrate.
Methodology and results: Out of 95 wild isolates tested, native fungal strain Aspergillus niger, designated DWA8 was
isolated as the top enzymatic secretor. For quantitative enzyme analysis, SSF was conducted using 1x106 spore/mL
inoculated onto 5 g of ground OPF, incubated at room temperature for 7 days, with 70% moisture content and an initial
medium pH of 7. Random mutagenesis has always been tempting in the enhancement of enzyme production. In this
work, the compounded treatment of microwave, ultraviolet (UVC) and Ethyl Methanesulfonate (EMS) have generated an
Aspergillus niger MUE3.06 mutant with an overall increase of 114% in CMCase activity, approximately 70% in FPase
and Xylanase activity respectively compared with the parental DWA8 strain. Thus this finding is capable to be fully
developed as an established mutational scheme to create highly productive filamentous fungus in a cheap, simple and
sustainable way.
Conclusion, significance and impact of study: It was the first attempt to explore the combine effect of the three
popular mutagens upon cellulases and xylanases. It is believed that more diversified of mutagen types induce more
diversified mutation pattern (with instructive planning), which is very desirable in creating new enzymes with novel
abilities.
Cellulases
3.Detection of Extracellular Enzyme Activities in Ganoderma neo-japonicum.
Woo Sik JO ; Ha Na PARK ; Doo Hyun CHO ; Young Bok YOO ; Seung Chun PARK
Mycobiology 2011;39(2):118-120
The ability of Ganoderma to produce extracellular enzymes, including beta-glucosidase, cellulase, avicelase, pectinase, xylanase, protease, amylase, and ligninase was tested in chromogenic media. beta-glucosidase showed the highest activity, among the eight tested enzymes. In particular, Ganoderma neo-japonicum showed significantly stronger activity for beta-glucosidase than that of the other enzymes. Two Ganoderma lucidum isolates showed moderate activity for avicelase; however, Ganoderma neo-japonicum showed the strongest activity. Moderate ligninase activity was only observed in Ganoderma neo-japonicum. In contrast, pectinase, amylase, protease, and cellulase were not present in Ganoderma. The results show that the degree of activity of the tested enzymes varied depending on the Ganoderma species tested.
Amylases
;
beta-Glucosidase
;
Cellulase
;
Cellulases
;
Ganoderma
;
Oxygenases
;
Polygalacturonase
;
Reishi
4.Effect of continuous temperature change on hydrolytic products of yeast beta-glucan by endo-beta-1,3-glucanase.
Feng DUAN ; Xuemei LU ; Yongcheng DUAN ; Peiji GAO
Chinese Journal of Biotechnology 2011;27(7):1092-1099
In order to explore the influence of reaction temperature on the product composition, the effect of continuous temperature change (22 degrees C-60 degrees C, +/-0.1 degree C) on hydrolysis of yeast beta-glucan by endo-beta-1,3-glucanase was determined by using self-developed Biochem-temperature Characteristic Apparatus. The activation energy of enzymatic hydrolysis of yeast beta-glucan was 84.17 kJ/mol. The optimum temperature represented by accumulation of products decreased exponentially within a certain period of time. The components of the products were changed with reaction temperature. The length of oligosaccharides decreased with the increase of temperature. The main products were laminaribiose and laminaritriose at the temperature higher than 46 degrees C, while the main products were laminaripentaose and larger molecular weight components at the temperature lower than 30 degrees C. The results can provide precise parameters to control the reaction temperature of the production of 1,3-beta-D-glucooligosaccharides.
Enzyme Activation
;
Glucan Endo-1,3-beta-D-Glucosidase
;
chemistry
;
metabolism
;
Hydrolysis
;
Oligosaccharides
;
chemistry
;
metabolism
;
Temperature
;
Yeasts
;
metabolism
;
beta-Glucans
;
metabolism
5.Comparison of Dyes for Easy Detection of Extracellular Cellulases in Fungi.
Ji Hwan YOON ; Ji Eun PARK ; Dong Yeon SUH ; Seung Beom HONG ; Seung Ju KO ; Seong Hwan KIM
Mycobiology 2007;35(1):21-24
To evaluate which dye is effective in a plate assay for detecting extracellular cellulase activity produced by fungi, four chromogenic dyes including remazol brilliant blue, phenol red, congo red, and tryphan blue, were compared using chromagenic media. For the comparison, 19 fungal species belonging to three phyla, ascomycota, basidiomycota, and zygomycota were inoculated onto yeast nitrogen-based media containing different carbon substrates such as cellulose (carboxylmethyl and avicel types) and cellobiose labeled with each of the four dyes. Overall, the formation of clear zone on agar media resulting from the degradation of the substrates by the enzymes secreted from the test fungi was most apparent with media containing congo red. The detection frequency of cellulase activity was also most high on congo red-supplemented media. The results of this study showed that congo red is better dye than other three dyes in a plate assay for fungal enzyme detection.
Agar
;
Ascomycota
;
Basidiomycota
;
beta-Glucosidase
;
Carbon
;
Cellobiose
;
Cellulase
;
Cellulases*
;
Cellulose
;
Coloring Agents*
;
Congo
;
Congo Red
;
Fungi*
;
Phenolsulfonphthalein
;
Yeasts
6.Separation and regeneration of protoplast from Phellinus igniarius.
China Journal of Chinese Materia Medica 2007;32(21):2232-2235
OBJECTIVETo study the conditions on separation and regeneration of protoplast from Phellinus igniarius.
METHODThe effects of enzymolysis conditions of P. igniarius mycelia on yield of protoplast and culturing conditons on regeneration ratio of protoplast were investigated.
RESULTWhen the 8 days-old mycelia was hydrolysed by 1.5% of lywallzyme adding to driselase of 0. 5% and at 30 degrees C for 3 h and enzymolysis was stablized by sucrose as a stablisher of osmotic pressure, higher yield of P. igniarius protoplast was obtained. If 10 days-old mycelia was used as raw material of enzymolysis and manntol was selected as stablisher of osmotic pressure of enzymolysis, higher regeneration ratio of P. igniarius protoplast also would be obtained in following regeneration step at same time keeping higher yield. For the regeneration processing, it was beneficial for the regeneration of P. igniarius protoplast that PDA plusing mulberry ramulus was used as the culture medium of regeneration and manntol was selected as the osmotic pressure establisher of regeneration culture medium.
CONCLUSIONThe method and conditions to keep both higher yield and regeneration ratio of P. igniarius protoplast were obtained.
Culture Media ; pharmacology ; Fungal Proteins ; pharmacology ; Glucan Endo-1,3-beta-D-Glucosidase ; pharmacology ; Glycoside Hydrolases ; pharmacology ; Mannitol ; pharmacology ; Multienzyme Complexes ; pharmacology ; Osmotic Pressure ; Peptide Hydrolases ; pharmacology ; Polyporaceae ; drug effects ; physiology ; Protoplasts ; drug effects ; physiology ; Regeneration ; drug effects ; Sucrose ; pharmacology ; Temperature
7.Extracellular Enzyme Activities of the Monokaryotic Strains Generated from Basidiospores of Shiitake Mushroom.
Hyuk Woo KWON ; In Joung BACK ; Han Gyu KO ; Chang Hyun YOU ; Seong Hwan KIM
Mycobiology 2008;36(1):74-76
To obtain basic information on the biochemical property of basidiospores of shiitake mushroom (Lentinula edodes), the ability of producing extracellular enzyme was assessed using a chromogenic plate-based assay. For the aim, amylase, avicelase, beta-glucosidase, CM-cellulase, pectinase, proteinase, and xylanase were tested against monokaryotic strains generated from forty basidiospores of two different parental dikaryotic strains of shiitake mushroom, Sanjo-101Ho and Sanjo-108Ho. These two parental strains showed different degree of extracellular enzyme activity. No identical patterns of the degree of enzyme activity were observed between monokaryotic strains and parental strains of the two shiitake cultivars. The degree of extracellular enzyme activity also varied among monokaryotic strains of the two shiitake cultivars. Our results showed that dikaryotic parental strains of shiitake mushroom produce monokaryotic basidiospores having very diverse biochemical properties.
Amylases
;
beta-Glucosidase
;
Cellulases
;
Humans
;
Parents
;
Polygalacturonase
;
Shiitake Mushrooms
8.Protective Effects of Immunization with Proteinase, Phospholipase and Cell Wall Proteins of Candida albicans in Mice Candidosis.
Woon Seob SHIN ; Sun Ju CHOI ; Young Chul YANG ; Su Jung PARK ; Joo Young PARK ; Soo Ki KIM ; Kyoung Ho LEE
Korean Journal of Medical Mycology 2009;14(1):9-15
BACKGROUND: The opportunistic fungus Candida albicans is a major pathogen especially to immunocompromised patients. OBJECTIVES: We examined the protective effect of the active and passive immunizations to evaluate the applicability for the treatment of candidosis in Candida-infected mice model. METHODS: Candida cell wall components were obtained by treatment of lyticase, proteinase K, and dithiothreitol. The proteinase was purified from the culture filtrates of C. albicans using a series of chromatographic steps consisting of DEAE-Sepharose FF, Sephacryl S-200 HR and size-exclusion high performance liquid chromatography. The phospholipase was purified from the culture supernatant of C. albicans with DEAE column chromatography, reverse phase column chromatography, revere phase HPLC and size-exclusion HPLC. Antibodies to cell wall protein components, proteinase and phospholipase were produced by immunization into mice of same strain. RESULTS: The mean survival times of active and passive immunized mice groups were longer than those of non-immunized groups. CONCLUSION: These results showed that immunization with proteinase and its antibody were the most effective to prolong survival time in Candida-infected mice.
Acrylic Resins
;
Animals
;
Antibodies
;
Candida
;
Candida albicans
;
Cell Wall
;
Chromatography
;
Chromatography, High Pressure Liquid
;
Chromatography, Liquid
;
Chromatography, Reverse-Phase
;
Dithiothreitol
;
Endopeptidase K
;
Ethanolamines
;
Fungi
;
Glucan Endo-1,3-beta-D-Glucosidase
;
Immunization
;
Immunization, Passive
;
Mice
;
Multienzyme Complexes
;
Peptide Hydrolases
;
Phospholipases
;
Proteins
;
Survival Rate
9.Biochemical Characterization of an Extracellular beta-Glucosidase from the Fungus, Penicillium italicum, Isolated from Rotten Citrus Peel.
Ah Reum PARK ; Joo Hee HONG ; Jae Jin KIM ; Jeong Jun YOON
Mycobiology 2012;40(3):173-180
A beta-glucosidase from Penicillium italicum was purified with a specific activity of 61.8 U/mg, using a chromatography system. The native form of the enzyme was an 88.5-kDa tetramer with a molecular mass of 354 kDa. Optimum activity was observed at pH 4.5 and 60degrees C, and the half-lives were 1,737, 330, 34, and 1 hr at 50, 55, 60, and 65degrees C, respectively. Its activity was inhibited by 47% by 5 mM Ni2+. The enzyme exhibited hydrolytic activity for p-nitrophenyl-beta-D-glucopyranoside (pNP-Glu), p-nitrophenyl-beta-D-cellobioside, p-nitrophenyl-beta-D-xyloside, and cellobiose, however, no activity was observed for p-nitrophenyl-beta-D-lactopyranoside, p-nitrophenyl-beta-D-galactopyranoside, carboxymetyl cellulose, xylan, and cellulose, indicating that the enzyme was a beta-glucosidase. The kcat/Km (s-1 mM-1) values for pNP-Glu and cellobiose were 15,770.4 mM and 6,361.4 mM, respectively. These values were the highest reported for beta-glucosidases. Non-competitive inhibition of the enzyme by both glucose (Ki = 8.9 mM) and glucono-delta-lactone (Ki = 11.3 mM) was observed when pNP-Glu was used as the substrate. This is the first report of non-competitive inhibition of beta-glucosidase by glucose and glucono-delta-lactone.
beta-Glucosidase
;
Cellobiose
;
Cellulases
;
Cellulose
;
Chromatography
;
Citrus
;
Fungi
;
Glucose
;
Glucosides
;
Hydrogen-Ion Concentration
;
Penicillium
10.Utilization of used fungus-growing materials of Gastrodia elata.
Jin-Qiang ZHANG ; Wei-Ke JIANG ; Lan-Ping GUO ; Zhen OUYANG ; Yuan WEI ; Jie YANG ; Cheng-Hong XIAO ; Jiao XU ; Guang-Wen ZHANG ; Tao ZHOU
China Journal of Chinese Materia Medica 2022;47(9):2309-2314
This study aims to explore the resource utilization of used fungus-growing materials produced in the cultivation of Gastrodia elata. To be specific, based on the production practice, this study investigated the recycling mechanism of used fungus-growing materials of G. elata by Phallus inpudicus. To screen edible fungi with wide adaptability, this study examined the allelopathic effects of Armillaria mellea secretions on P. impudicus and 6 kinds of large edible fungi and the activities of enzymes related to degradation of the used fungus-growing materials of G. elata. The results showed that P. impudicus can effectively degrade cellulose, hemicellulose, and lignin in used fungus-growing materials of G. elata. The cellulase activity of A. mellea was significantly higher than that of P. impudicus, and the activities of lignin peroxidase, polyphenol oxidase, and xylanase of P. impudicus were significantly higher than those of A. mellea, which was the important reason why A. mellea and P. impudicus used different parts and components of the used fungus-growing materials to absorb carbon sources and develop ecological niche differences. The growth of P. impudicus was significantly inhibited on the used fungus-growing materials of G. elata. The secretions of A. mellea had allelopathic effects on P. impudicus and other edible fungi, and the allelopathic effects were related to the concentration of allelopathy substances. The screening result showed that the growth and development of L. edodes and A. auricular were not significantly affected by 30% of A. mellea liquid, indicating that they had high resistance to the allelopathy of A. mellea. The results showed that the activities of extracellular lignin peroxidase, polyphenol oxidase, and xylanase of the two edible fungi were similar to those of P. impudicus, and the cellulase activity was higher than that of P. impudicus. This experiment can be further verified by small-scale production tests.
Agaricales
;
Ascomycota
;
Basidiomycota
;
Catechol Oxidase
;
Cellulases
;
Gastrodia