1.Progress in brewer's yeast cell wall stress response.
Mingfang ZHANG ; Jinjing WANG ; Chengtuo NIU ; Yongxian LI ; Feiyun ZHENG ; Chunfeng LIU ; Qi LI
Chinese Journal of Biotechnology 2019;35(7):1214-1221
Yeast cell wall plays an important role in the establishment and maintenance of cell morphology upon the cell wall stress. The cell wall of yeast consists of β-glucans, mannoproteins and chitin. The composition and structure remodel due to cell wall stress. Brewer's yeast cell wall exhibits stress response during long-term acclimation in order to adapt to environmental changes. This paper reviews the composition and structure of yeast cell wall and the molecular mechanisms of cell wall remodeling and signal pathway regulation.
Cell Wall
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Chitin
;
Saccharomyces cerevisiae
2.Overexpression, purification and truncation analysis of RmlC protein of Mycobacterium tuberculosis.
Jong Seok LEE ; Tae Yoon LEE ; Jae Ho PARK ; Jong Sun KIM ; Tae Jin LEE ; Jai Youl LEE ; Sung Kwang KIM
Journal of the Korean Society for Microbiology 2000;35(4):273-282
dTDP-rhamnose provides L-rhamnose to the bridge-like structure between mycolyl arabinogalactan and peptidoglycan of the mycobacterial cell wall. dTDP-rhamnose is composed of glucose-1-phosphate and dTTP by four enzymes encoded by rmlA-D. To determine the region(s) of RmlC protein essential for its dTDP-4-keto-6-deoxyglucose epimerase activity, we overexpressed both whole (202 amino acids) and three different truncated (N-terminal 106 or 150 or C-terminal 97 amino acids) RmlC proteins of Mycobacterium tuberculosis. The RmlC enzyme activity in the soluble lysates of DELTArmlC E. coli strain SPHI874 (DE3 PlysS) expressing the wild type or truncated rmlC genes was initially analyzed by three sequential reactions from dTDP-glucose to dTDP-rhamnose in the presence of purified RmlB and RmlD. All three soluble lysates containing the truncated RmlC proteins showed no enzyme activity, while that containing the wild type RmlC was active. This wild type RmlC was then overexpressed and purified. The incubation of the purified RmlC enzyme so obtained with dTDP-4-keto-6-deoxyglucose resulted in the conversion of dTDP-4-keto-rhamnose. The results show that the truncated regions of the RmlC protein are important for the RmlC enzyme activity in M. tuberculosis.
Cell Wall
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Mycobacterium tuberculosis*
;
Mycobacterium*
;
Peptidoglycan
;
Tuberculosis
3.Periurethral Granular Cell Tumor: A Case Report.
Jeong Kon KIM ; Hyo Gyeong CHOI ; Kyoung Sik CHO
Journal of the Korean Radiological Society 1998;39(4):785-787
Granular cell tumors are uncommon soft tissue tumors which arise as solitary or multiple masses. Lesionscommonly arise in the head, neck, and chest wall, but can occur in any part of the body. To our knowledge,periurethral granular cell tumor has not been previously reported. We report one such case.
Granular Cell Tumor*
;
Head
;
Neck
;
Thoracic Wall
4.A case of malignant T cell lymphoma of chest wall.
Eai Suk HWANG ; Hyung Jung KIM ; Jong Hwa LEE ; Chul Min AHN ; Sung Kyu KIM ; Won Young LEE ; Sang Jin KIM ; Youn Jung CHOI ; Woo Hee JUNG
Tuberculosis and Respiratory Diseases 1993;40(2):192-196
No abstract available.
Lymphoma, T-Cell*
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Thoracic Wall*
;
Thorax*
5.Observation of Soft-Rot Wood Degradation Caused by Higher Ascomyceteous fungi.
Mycobiology 2000;28(1):47-50
The capability of higher ascomyceteous fungi to cause typical soft-rot decay for wood under laboratory conditions is reviewed and discussed. Fungi tested were extremely active in the decomposition of timbers. Scanning electron micrographs illustrated typical soft-rot decay pattern of higher wood decay ascomycetes, with the exception of H. trugodes that caused white-rot decay. Most of the fungi tested could be grouped as soft-rot fungi that showed typical soft-rot type II. Hypha confined primarily to the resin canals in softwoods or vessel elements in hardwoods and spread tracheid to tracheid via pits of cell wall to cell wall with mechanical force.
Ascomycota
;
Cell Wall
;
Fungi*
;
Hyphae
;
Wood*
6.Current Technologies and Related Issues for Mushroom Transformation.
Sinil KIM ; Byeong Suk HA ; Hyeon Su RO
Mycobiology 2015;43(1):1-8
Mushroom transformation requires a series of experimental steps, including generation of host strains with a desirable selective marker, design of vector DNA, removal of host cell wall, introduction of foreign DNA across the cell membrane, and integration into host genomic DNA or maintenance of an autonomous vector DNA inside the host cell. This review introduces limitations and obstacles related to transformation technologies along with possible solutions. Current methods for cell wall removal and cell membrane permeabilization are summarized together with details of two popular technologies, Agrobacterium tumefaciens-mediated transformation and restriction enzyme-mediated integration.
Agaricales*
;
Agrobacterium
;
Cell Membrane
;
Cell Wall
;
DNA
;
Protoplasts
7.An Effective Method of RNA Extraction from Mycobacterium tuberculosis.
Tae Sang OH ; Hee Yoon KANG ; You Sun NAM ; Young Jin KIM ; Eun Kyung YOU ; Min Young LEE ; Sun Young CHO ; Hee Joo LEE
Annals of Clinical Microbiology 2016;19(1):20-23
In the RNA-based study, it is important to extract high-quality RNA. However, RNA extraction from Mycobacterium tuberculosis is problematic due to its thick, waxy cell wall rich in mycolic acid, which renders the cells resistant to lysis. Using TRIzol reagent and several powerful bead-beating steps, a high quantity of RNA was obtained.
Cell Wall
;
Mycobacterium tuberculosis*
;
Mycobacterium*
;
Mycolic Acids
;
RNA*
8.An Easy, Rapid, and Cost-Effective Method for DNA Extraction from Various Lichen Taxa and Specimens Suitable for Analysis of Fungal and Algal Strains.
Sook Young PARK ; Seol Hwa JANG ; Soon Ok OH ; Jung A KIM ; Jae Seoun HUR
Mycobiology 2014;42(4):311-316
Lichen studies, including biodiversity, phylogenetic relationships, and conservation concerns require definitive species identification, however many lichens can be challenging to identify at the species level. Molecular techniques have shown efficacy in discriminating among lichen taxa, however, obtaining genomic DNA from herbarium and fresh lichen thalli by conventional methods has been difficult, because lichens contain high proteins, polysaccharides, and other complex compounds in their cell walls. Here we report a rapid, easy, and inexpensive protocol for extracting PCR-quality DNA from various lichen species. This method involves the following two steps: first, cell breakage using a beadbeater; and second, extraction, isolation, and precipitation of genomic DNA. The procedure requires approximately 10 mg of lichen thalli and can be completed within 20 min. The obtained DNAs were of sufficient quality and quantity to amplify the internal transcribed spacer region from the fungal and algal lichen components, as well as to sequence the amplified products. In addition, 26 different lichen taxa were tested, resulting in successful PCR products. The results of this study validated the experimental protocols, and clearly demonstrated the efficacy and value of our KCl extraction method applied in the fungal and algal samples.
Biodiversity
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Cell Wall
;
DNA*
;
Fungi
;
Lichens*
;
Polymerase Chain Reaction
;
Polysaccharides
9.An electronmicroscopic study of the interaction of Burkholderia pseudomallei and human macrophages.
Sakthi A Nathan ; S D Puthucheary
The Malaysian journal of pathology 2005;27(1):3-7
B. pseudomallei has been shown to persist intracellularly in melioidosis patients until reactivated by decreasing immunocompetence. We have shown by transmission electron microscopy the internalization of B. pseudomallei by human macrophages via conventional phagocytosis enclosed within membrane-bound vacuoles or phagosomes. Ferritin labeled lysosomes provided evidence of phagosome-lysosome fusion. Ingested bacilli were designated as "intact" or "damaged" on the basis of their ultrastructural features. An intact bacterium was seen with low electron opaque central nuclear region surrounded by dense bacterial cytoplasm, bounded externally by bacterial plasma membrane and cell wall. In contrast, B. pseudomallei were considered damaged when seen with cavitation within the central nuclear region, separation of bacterial cytoplasm from the cell wall, herniation of cytoplasmic contents and lamination of bacterial cell wall and its surrounding electron transparent zone. Our observations indicate that the microbicidal mechanism(s) in B. pseudomallei-infected macrophages failed to ensure complete clearance of the organism and this failure probably facilitates intracellular persistence and proliferation, and this may be one of the survival strategies adopted by this organism.
Upper case Bee
;
Human
;
Cytoplasm
;
Cell Wall
;
seconds
10.Localized Pulmonary Cryptococcosis Diagnosed by Fine Needle Aspiration Cytology: Report of a Case.
Chan Kum PARK ; Wan Sup KIM ; Geun Shin LYU ; Seok Chol JEON ; Jung Dal LEE
Korean Journal of Cytopathology 1997;8(1):107-111
Initial rapid diagnosis of primary pulmonary cryptococcosis(PPC) occurring in a immunocompetent host was made by transthoracic fine needle aspiration cytology of a solitary subpleural nodule. Numerous refractile spherical organisms surrounded by a clear halo were demonstrated with haematoxylin-eosin and Papanicolaou stains. The organisms, 5 15 micrometer in diameter, were easily demonstrated with Gomori methenamine-silver stain. Many of the organisms showed narrow-base budding. Carminophilic cell walls were well demonstrated with mucicarmine stain.
Biopsy, Fine-Needle*
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Cell Wall
;
Coloring Agents
;
Cryptococcosis*
;
Diagnosis
;
Lung