1.Molecular properties of grass carp reovirus in southern China and establishment of a duplex PCR detection method.
Yan-Yan CHI ; Yuan-Yuan TIAN ; Xing YE ; Guo-Cheng DENG ; Jiong LI ; Hang-Jun WANG
Chinese Journal of Virology 2011;27(4):358-365
A strain of grass carp reovirus was isolated from sick grass carp with symptoms of haemorrhage in Guangdong province in 2009. The strain was tentatively named as GCRV-GD108 because it was isolated from grass carp and possessed 11 segments of dsRNA. Complete genome sequence analysis showed that significant differences existed between GCRV-GD108 and GCRV, as well as other known species of aquareovirus. In this study, molecular characteristics of diseased grass carp collected from different farms in Guangdong, Fujian and Hunan provinces were assayed. Based on the sequences of the 11 segments of GCRV-GD108, PCR primers corresponding to each of the segments were designed and synthesized. Total RNA of the diseased fish was extracted and used as templates of RT-PCR reaction. Specific amplification bands were obtained from all of the samples whereas no band was produced from GCRV standard strain. While using the primers specific to GCRV produced specific band in GCRV standard strain rather than in these collected samples. Sequencing of the amplification products showed that these samples displayed high similarities with each other (95.2%-99.4%), and they also shared high sequence similarities with that of GCRV-GD108 (95.0%-99.8%), suggesting that these samples shared similar molecular characteristics with those of GCRV-GD108, and were quite different from GCRV as well as the known species of genus aquareovirus. The results indicated that there are different molecular types of reovirus existed in the pond-cultured grass carp in China, and GCRV-GD108 is a representative strain in southern China, therefore great attention should be paid in order to control the disease efficiently, especially in vaccine preparation. Two pairs of primers were chosen to establish a duplex PCR assay method by combining each pair of the primers specific to GCRV-GD108 with the GCRV primer pair respectively. The duplex PCR assay method will enable the identification of GCRV-GD108 or GCRV by only a single PCR reaction.
Animals
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Carps
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virology
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China
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Fish Diseases
;
diagnosis
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virology
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Molecular Sequence Data
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Polymerase Chain Reaction
;
methods
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Reoviridae
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genetics
;
isolation & purification
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Reoviridae Infections
;
veterinary
;
virology
2.Isolation and characterization of a novel strain (YH01) of Micropterus salmoides rhabdovirus and expression of its glycoprotein by the baculovirus expression system.
Sun-Jian LYU ; Xue-Mei YUAN ; Hai-Qi ZHANG ; Wei-da SHI ; Xiao-Ying HANG ; Li LIU ; Ying-Lei WU
Journal of Zhejiang University. Science. B 2019;20(9):728-739
As one of the most important aquatic fish, Micropterus salmoides suffers lethal and epidemic disease caused by rhabdovirus at the juvenile stage. In this study, a new strain of M. salmoides rhabdovirus (MSRV) was isolated from Yuhang, Zhejiang Province, China, and named MSRV-YH01. The virus infected the grass carp ovary (GCO) cell line and displayed virion particles with atypical bullet shape, 300-500 nm in length and 100-200 nm in diameter under transmission electron microscopy. The complete genome sequence of this isolate was determined to include 11 526 nucleotides and to encode five classical structural proteins. The construction of the phylogenetic tree indicated that this new isolate is clustered into the Vesiculovirus genus and most closely related to the Siniperca chuatsi rhabdovirus. To explore the potential for a vaccine against MSRV, a glycoprotein (1-458 amino acid residues) of MSRV-YH01 was successfully amplified and cloned into the plasmid pFastBac1. The high-purity recombinant bacmid-glycoprotein was obtained from DH10Bac through screening and identification. Based on polymerase chain reaction (PCR), western blot, and immunofluorescence assay, recombinant virus, including the MSRV-YH01 glycoprotein gene, was produced by transfection of SF9 cells using the pFastBac1-gE2, and then repeatedly amplified to express the glycoprotein protein. We anticipate that this recombinant bacmid system could be used to challenge the silkworm and develop a corresponding oral vaccine for fish.
Animals
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Baculoviridae/metabolism*
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Bass/metabolism*
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Carps/virology*
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Cell Line
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Female
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Genetic Techniques
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Genome, Viral
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Glycoproteins/biosynthesis*
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Insecta
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Ovary/virology*
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Phylogeny
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Plasmids/metabolism*
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Recombinant Proteins/biosynthesis*
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Rhabdoviridae/metabolism*
3.Highly efficient inhibition on replication of grass carp reovirus mediated by chemically synthesized small interfering RNAs.
Bing LI ; Yu-Ding FAN ; Yan-Qiu LI ; Jin XU ; Yong ZHOU ; Ling-Bing ZENG
Chinese Journal of Virology 2009;25(5):388-394
Two short interfering RNAs (siRNA-RdRp1286, siRNA-RdRp1441) and one short interfering RNA (siRNA-OCP117), targeted to the RNA dependent RNA polymerase (RdRp) gene and outer capsid protein (OCP) gene of Grass carp reovirus (GCRV) respectively, were chemically synthesized and transfected into the CIK cells by lipofectamine 2000. 6 hours after transfection, the transfected CIK cells were challenged with GCRV. The culture media were collected at 48h post challenge and the virus was titrated in microculture system to evaluate the inhibition effect on GCRV replication mediated by siRNAs. Referring to the mRNA level of housekeeping gene beta-actin, RT-PCR was applied to detect the level of GCRV mRNA in transfected and challenged CIK cells. The results showed that the viral titer (lgTCID50/0. 1mL) in siRNA-RdRp1286, siRNA-RdRp1441 and siRNA-OCP117 transfected CIK cells were 4.41 +/- 0.16, 3.83 +/- 0.44 and 1.94 +/- 0.42 respectively, which were significantly lower than that in virus infection positive control (7.92 +/- 0.52) (P < 0.01). No significant change in viral titer was observed in the group transfected with siRNA negative control after challenged with GCRV (7.50 +/- 0.17, P > 0.05). Compared with the mRNA transcriptional level of beta-actin gene in virus infection positive control, the mRNA levels of GCRV in siRNA-RdRpl 286, siRNA-RdRp1 441 and siRNA-OCP117 transfected CIK cells were reduced significantly and the inhibition rate reached to (82.08 +/- 2.15)%, (89.19 +/- 1.14).% and (92.62 +/- 0.17)%, respectively. The mRNA level of GCRV in the siRNA negative control group had no noticeable change (P > 0 05).
Animals
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Carps
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virology
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Cells, Cultured
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RNA, Small Interfering
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chemical synthesis
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chemistry
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pharmacology
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Reoviridae
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drug effects
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genetics
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Reverse Transcriptase Polymerase Chain Reaction
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Virus Replication
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drug effects
4.Comparison of characteristics of SVCV strains isolated in China and in Europe.
Long-ying GAO ; Hong LIU ; Xiu-jie SHI ; Jun-qiang HE ; Yu-lin JIANG
Chinese Journal of Virology 2009;25(1):47-51
In the nationwide epidemiological investigation, SVCV-741 was for the first time isolated in Beijing region, China in 2003, and designated as SVCV Asian strain. In this paper, we compared SVCV-741 (Asian strains isolated in China) with SVCV-10/3 (Europe reference strain) on their physico-chemical, biological and morphological characteristics. The results indicated that there were no distinct differences between two SVCV strains on phycico-chemical and morphological characteristics. The main existing differences were: (1) The stability of SVCV-741 to temperature in cell culture was higher than that of SVCV-10/3, which might have some evolutionary and biological implication of SVCV; (2) No SVC outbreak ever occurred caused by SVCV-741;Furthermore we found that both SVCV-741 and SVCV-10/3 grew faster and produced higher virus titer in CO cells than other cell lines. It indicated that CO cell lines might be useful tool for SVCV research.
Animals
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Carps
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virology
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Cell Line
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China
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Europe
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Fish Diseases
;
virology
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Fishes
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Microscopy, Electron, Transmission
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Reverse Transcriptase Polymerase Chain Reaction
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Rhabdoviridae Infections
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veterinary
;
virology
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Vesiculovirus
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genetics
;
growth & development
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isolation & purification
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ultrastructure