1.First delection of Borrelia burgdorferi sensu stricto genotype from Hyalomma asiaticum in Karamay, Xinjiang Uygur Autonomous Region of China.
Jingyun DU ; Andong WANG ; Lumeng MU ; Ke ZHANG ; Yuanzhi WANG ; Jun XU ; Chuangfu CHEN ; Lina WANG ; Jinliang SHENG ; Weize ZUO
Chinese Journal of Epidemiology 2015;36(5):539-540
2.Establishment of multiple locus variable-number tandem repeat analysis assay for genotyping of Borrelia burgdorferi sensu lato detected in China.
Xin ZHOU ; ; Xue Xia HOU ; Zhen GENG ; Rui ZHAO ; Kang Lin WAN ; Qin HAO ;
Biomedical and Environmental Sciences 2014;27(9):665-675
OBJECTIVEHuman Lyme Borreliosis (LB), which is caused by Borrelia burgdorferi sensu lato (B. burgdorferi), has been identified as a major arthropod-borne infectious disease in China. We aimed to develop a multiple locus variable-number tandem repeat (VNTR) analysis (MLVA) assay for the genotyping of Borrelia burgdorferi strains detected in China.
METHODSB. garinii PBi complete 904.246 kb chromosome and two plasmids (cp26 and lp54) were screened by using Tandem Repeats Finder program for getting potential VNTR loci, the potential VNTR loci were analyzed and identified with PCR and the VNTR loci data were analyzed and MLVA clustering tree were constrcted by using the categorical coefficient and the unweighted pair-group method with arithmetic means (UPGMA).
RESULTSWe identified 5 new VNTR loci through analyzing 47 potential VNTR loci. We used the MLVA protocol to analyse 101 B. burgdorferi strains detected in China and finally identified 51 unique genotypes in 4 major clusters including B. burgdorferi sensu stricto (B.b.s.s), B. garinii, B. afzelii, and B. valaisiana, consistent with the current MLSA phylogeny studies. The allele numbers of VNTR-1, VNTR-2, VNTR-3, VNTR-4, and VNTR-5 were 7, 3, 9, 7, and 6. The Hunter-Gaston index (HGI) of five VNTR loci were 0.79, 0.22, 0.77, 0.71, and 0.67, respectively. The combined HGI of five VNTR loci was 0.96. Clustering of the strains of Xinjiang, Inner Mongolia and Heilongjiang was confirmed, and this situation was consistent with the close geographical distribution of those provinces.
CONCLUSIONThe MLVA protocol esytablished in this study is easy and can show strains' phylogenetic relationships to distinguish the strains of Borrelia species. It is useful for further phylogenetic and epidemiological analyses of Borrelia strains.
Borrelia burgdorferi Group ; genetics ; China ; Genotyping Techniques ; Minisatellite Repeats
3.DNA detection and sequence analysis of Borrelia burgdorferi sensu lato in rodents from Helongjiang and forest region.
Shuang-yan ZUO ; Kun TANG ; Ying LI ; Ji-hong YU ; Yuan ZHANG ; Xue-bing NI ; Yuan-chun ZHENG ; Qiu-bo HUO ; Yu-dong SONG ; Xiao-min ZENG
Chinese Journal of Epidemiology 2012;33(6):643-644
4.Exploratory study on natural focus and its causative agent of genotype of Lyme disease by polymerase chain reaction in the forest areas of Beijing.
Jianmin LI ; Wuchun CAO ; Xitan ZHANG ; Xiaoming WU ; Panhe ZHANG ; Qiumin ZHAO ; Hong YANG ; Zhenying DONG ; Shengli CAI
Chinese Journal of Epidemiology 2002;23(3):209-212
OBJECTIVETo learn the existence of natural focus of Lyme disease and its distribution.
METHODSA semi-nested polymerase chain reaction (PCR) method was developed for detection and genotyping of Borrelia burgdorferi on basis of outer surface protein A (OspA) gene. Ticks and mice collected from 6 forest areas in Beijing were detected with above methods. The positive PCR products were cloned and sequenced. The sequences were compared with published sequences for homology. IFA as used to detect IgG antibody on Borrelia burgdorferi. Lyme disease spirochete were isolated from H. longicornis were also attempted.
RESULTSB. Burgdorferi sensu lato were detected from 939 ticks and 250 mice specimens collected from above 6 study sites using primer pairs OA(1)/OA(4) and SL/OA(4). Only the specimens collected from Dongling mountain showed positive amplification. One in three adult Ixodes persulcatus with one of 57 nymph Ixodes persulcatus showed positive while 9 of 119 (7.56%) mice specimens showed positive, of which 8 were B. grinii and one B. afzelii. In this study, we attempted to isolate B. burgdorferi sensu lato strains from 160 H. longicornis ticks (20/group) but failed. Serological survey showed a 9.1% (5/55) infection rate with B. burgdorferi sensu lato in the mice of Dongling mountain forest areas.
CONCLUSIONSThe natural focus of Lyme disease including B. garinii and B. afzelii might have existed in Dongling mountain of Mentougou district, Beijing. Ixodes persulcatu and mice may serve as vectors and reservoirs, respectively.
Animals ; Antigens, Surface ; genetics ; Bacterial Outer Membrane Proteins ; genetics ; Bacterial Vaccines ; Borrelia burgdorferi ; genetics ; Borrelia burgdorferi Group ; classification ; genetics ; Humans ; Ixodes ; microbiology ; Lipoproteins ; Lyme Disease ; microbiology ; Mice ; Phylogeny ; Polymerase Chain Reaction ; methods
5.Isolation of Borrelia burgdorferi in ixodes from four counties, in North Xinjiang.
Lin ZHANG ; Yuanzhi WANG ; Chuangfu CHEN ; Yongxiang LI ; Ke ZHANG ; Jingyun DU ; Yali ZHANG ; Zhaotang CHE
Chinese Journal of Epidemiology 2014;35(3):262-265
OBJECTIVETo identify ticks and determine the Borrelia (B.) burgdorferi genotype from four counties of northern Xinjiang.
METHODSSheep ticks were collected from 6 surveillance sites in four counties including Shihezi, Shawan,Yining and Chabuchaer. All ticks were initially screened out based on morphological methods and 16S rRNA sequence analysis. B. burgdorferi was detected and cultivated with BSK-H medium. Combined with nested PCR, silver nitrate staining was employed to detect B. burgdorferi. Genotype of isolated B. burgdorferi was determined by Sequencing and phylogenic analysis based on 11 conference sequences.
RESULTSHyalomma asiaticum asiaticum, Haemaphysalis punctata, Dermacentor marginatus and Rhipicephalus turanicus were identified from more than 900 ticks. Out of 24 tubes from 102 representative tick specimens, 16 tube were positive for B. burgdorfer. Sequencing of 5S-23S rRNA intergenic spacer showed 98.6%-99.5% identities to B. burgdorferi Sensu Stricto(B31). Results from the analysis of OspC genotype showed consistent with that of 5S-23S rRNA intergenic spacer.
CONCLUSIONS16 strains of B. burgdorferi Sensu Stricto were isolated in four counties, from northern Xinjiang. Additionally, B. burgdorferi Sensu Stricto was isolated from Rhipicephalus turanicus first time in China.
Animals ; Borrelia burgdorferi ; genetics ; China ; epidemiology ; DNA, Bacterial ; genetics ; Genotype ; Ixodes ; microbiology ; Lyme Disease ; epidemiology ; prevention & control
6.Investigation on the vectors of Borrella burgdorferi and on the identification of the isolates along China-Russia border in Eastern Heilongjiang province, China.
Hao HE ; Qin HAO ; Man-xia HU ; Xue-xia HOU ; Dong-hui FAN ; Zhen GENG ; Jian ZHANG ; Shao-hua ZHANG ; Chao ZHENG ; Yong-sheng WU ; Chuan-song WANG ; Wen-fu CUI ; Kang-lin WAN ; Li-wei YANG
Chinese Journal of Epidemiology 2007;28(1):70-73
OBJECTIVETo explore the fact that the east border of Heilongjiang had been a lyme disease natural focus,we investigated the species and distribution of ticks and isolated bacteria from ticks and identified genomic species of Borrelia burdorferi sensu lato. This study provided evidence for prevention and control of lyme disease.
METHODSTicks were caught by flagging method and Direct immunofluorescence method was used to detect the rate of bacteria borne by the tick. BSK UI culture medium was used to isolate the agent and Specific McAbs were used to identify the bacteria. SDS-PAGE protein profile and PCR-RFLP method were also used to identify the species of Spirochetes.
RESULTSTicks, collected from China-Russia border of east Heilongiiang province were classified including Ixodes persulcatus Schulze, Dermacentor sivarum Olener, Haemaphysalis concinna Kock,and Haemaphysalis japonica Kock. We found that the distributon of ticks was different under different circumstances and the predominant species were also different in different ports. The rate of bacteria borne by Iodes persulaatus Schulze was 31.4% ,by Dermacentor sivarum Olener and Haemaphysalis concinna Kock were 2.2% and 3.8%, respectively. However,it was negative for Haenaphysalis japonica Kock. Spirochetes isolated from Ixodes persulcatus Schulze were collected from Dongning and Tongjiang while Genomic species of Spirochetes, isolated from ticks of the border belonged to B. garinii.
CONCLUSIONAll the results showed that the east border of Heilongjiang province was the natural focus of lyme disease.
Animals ; Arachnid Vectors ; classification ; microbiology ; Borrelia burgdorferi ; classification ; genetics ; isolation & purification ; China ; Humans ; Lyme Disease ; microbiology ; Russia ; Ticks ; classification ; microbiology
8.Polymorphism of P66 in
Qin HAO ; Hui Xin LIU ; Xue Xia HOU ; Lin ZHANG ; Xiao Na YANG ; Kang Lin WAN
Biomedical and Environmental Sciences 2021;34(5):364-371
Objective:
To study the polymorphism in P66 and its human B-cell epitopes of
Methods:
Polymerase chain reaction (PCR) and sequencing were used to obtain the P66 sequences of 59 Chinese
Results:
Results showed that genetic and amino acid diversity presented in the 66 kD protein of all 59 Chinese strains, especially in
Conclusion
In P66 of 59 Chinese strains, polymorphisms were widely distributed. More importantly, the P66 amino acid sequences of
Bacterial Proteins/genetics*
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Borrelia burgdorferi/genetics*
;
China
;
Cluster Analysis
;
Epitopes, B-Lymphocyte/genetics*
;
Genetic Markers
;
Genotype
;
Humans
;
Mutation
;
Polymerase Chain Reaction
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Polymorphism, Genetic
;
Porins/genetics*
9.Study on the coinfection status of Borrelia burgdorferi sensu lato and spotted fever group Rickettsia in ticks from Hunchun, Jilin province.
Hai-nan HUANG ; Zhuang DING ; Jing HE ; Xiao-ming WU ; Bao-gui JIANG ; Yan GAO ; Chen-yi CHU ; Lin ZHAN ; Qiu-min ZHAO ; Yu-fu WANG ; Wu-chun CAO
Chinese Journal of Epidemiology 2006;27(5):379-383
OBJECTIVETo understand the coinfection status of Borrelia burgdorferi sensu lato (B.b.s.l) and spotted fever group Rickettsia (SFGR) in Hunchun of Jilin province, China.
METHODSPolymerase chain reaction (PCR) was used to detect the 5S-23S rRNA intergenic spacer of B. b. s. l and ompA of SFGR in ticks was collected in Hunchun,Jilin province. The amplification products of positive ticks were sequenced, and phylogenetic analysis was conducted by PHYLIP software package.
RESULTSThe infection rate of B. b. s. l was 36.0% in Ixodes persulcatus ticks and the SFGR was discovered in I. persulcatus ticks,with an infection rate of 2.0%. The coinfection rate of both agents was 2.0%. In 327 Dermacentor siltarum ticks, the positive rates of B. b. s. l and SFGR were 30.9% and 29.1% respectively. 55 ticks (16.8%) were coinfected with the two pathogens. The sequence analysis of B. b. s. l showed that the B. b. s. l in Jilin area, which were highly homologous, all belonged to B. garinii genotypes. The sequence analysis of SFGR positive products showed that the DNA secquence of the newly detected agent (JL-95) was close to the two previously described rickettsiae which were detected in I. ricinus from Slovakia (called IRS3 and IRS4). Phylogenetic relationships inferred from the comparison of these sequences with those of other genus Rickettsiae indicated that JL-95, IRS3 and IRS4 constituted a new rickettsial genotype and formed a separate cluster among the spotted fever group Rickettsiae.
CONCLUSIONCoinfection of B. b. s. l and SFGR existed in Hunchun, Jilin province. The sequencing of specific fragment confirmed a new SFGR which was different from other rickettsiae known in China.
Animals ; Borrelia burgdorferi Group ; genetics ; isolation & purification ; China ; DNA, Bacterial ; analysis ; Genotype ; Lyme Disease ; veterinary ; Phylogeny ; Polymerase Chain Reaction ; Rickettsia ; genetics ; isolation & purification ; Rickettsia Infections ; veterinary ; Ticks ; microbiology
10.Recombinant OspC identification and antigenicity detection from Borrelia burgdorferi PD91 in China.
Chinese Journal of Epidemiology 2003;24(10):917-919
OBJECTIVETo recombine OspC gene from Borrelia burgdorferi PD91 of China and expressed it in E. coli for early diagnosis of Lyme disease.
METHODSThe OspC gene was amplified from the genome of Borrelia burgdorferi PD91 strain by polymerase chain reaction and recombined with plasmid PET-11D. The recombinant plasmid PET-11D-OspC was identified with PCR, restriction endonuclease analysis and sequencing. The antigenicity was verified with Western Blot.
RESULTSOspC gene was cloned correctly into vector PET-11D. The resultant sequence was definitely different from the published sequence. The recombinant OspC seemed to have had strong antigenicity.
CONCLUSIONThe findings laid basis for the studies on early diagnosis of Lyme disease.
Antigens, Bacterial ; Bacterial Outer Membrane Proteins ; genetics ; immunology ; Blotting, Western ; Borrelia burgdorferi Group ; immunology ; Escherichia coli ; genetics ; Humans ; Lyme Disease ; diagnosis ; Polymerase Chain Reaction ; Recombinant Proteins ; analysis ; immunology