1.Taxonomy of the Golovinomyces cynoglossi Complex (Erysiphales, Ascomycota) Disentangled by Phylogenetic Analyses and Reassessments of Morphological Traits.
Uwe BRAUN ; Michael BRADSHAW ; Ting Ting ZHAO ; Sung Eun CHO ; Hyeon Dong SHIN
Mycobiology 2018;46(3):192-204
The name Golovinomyces cynoglossi s. lat. is traditionally applied to a complex of morphologically similar powdery mildews on hosts of the plant family Boraginaceae. The current species-level taxonomy within this complex is ambiguous due to the lack of phylogenetic examinations. The present study applied phylogenetic methods to clarify the taxonomy of G. cynoglossi s. lat. Phylogenetic analysis of rDNA ITS sequences retrieved from Asian, European and North American specimens revealed that G. cynoglossi s. lat. collections from different hosts involved several species in five clearly separated lineages. Clade I consists primarily of Golovinomyces cynoglossi s. str. on Cynoglossum. Clade III consists of Golovinomyces sequences retrieved from the host genera Symphytum and Pulmonaria. The taxa within clade III are now assigned to G. asperifoliorum comb. nov. Clade V encompasses G. cynoglossi s. lat. on the host genera Bothriospermum, Buglossoides, Echium, Myosotis, and Trigonotis. The taxa within clade V are now assigned to G. asperifolii comb. nov. The species concerned in this study were lecto- and epitypified to stabilize their nomenclature.
Animals
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Asian Continental Ancestry Group
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Boraginaceae
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Classification*
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Comb and Wattles
;
DNA, Ribosomal
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Echium
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Humans
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Plants
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Pulmonaria
2.Chemical study on ethyl acetate portion of Ehretia thyrsiflora, boraginaceae species of Kudingcha.
Li LI ; Li-jia XU ; Zhen-dan HE ; Qin-qiong YANG ; Yong PENG ; Pei-gen XIAO
China Journal of Chinese Materia Medica 2008;33(17):2121-2123
OBJECTIVETo investigate the chemical constituents of Ehretia thyrsiflora.
METHODCompounds were isolated by using silica gel, Sephadex LH-20 and RP-C18 chromatography; their structures were elucidated by means of spectral data analysis.
RESULTSeven compounds were isolated and identified as methyl rosmarinate (1), caffeic acid (2), quercetin (3), kampferol (4), kaempferol 3-O-alpha-D-arabinoside (5), quercetin 3-O-alpha-D-arabinoside (6), and p-hydroxy benzoic acid (7).
CONCLUSIONAll these compounds were isolated from E. thyrsiflora for the first time. Compounds 2-7 were isolated from genus Ehretia for the first time.
Acetates ; analysis ; Boraginaceae ; chemistry ; Drugs, Chinese Herbal ; chemistry
3.Cloning and functional verification of carboxyl CoA ligases(AeCCLs) in Arnebia euchroma.
Tan LI ; Jiu-Wen LIANG ; Rui-Shan WANG ; Xiu-Fu WAN ; Quan YANG ; Lan-Ping GUO ; Sheng WANG ; Lu-Qi HUANG
China Journal of Chinese Materia Medica 2021;46(9):2182-2189
Carboxyl CoA ligases(CCLs) is an important branch of adenylate synthetase gene family, which mainly has two-step catalytic reactions. Firstly, in the presence of adenosine triphosphate, it can catalyze the pyrophosphorylation of carboxylateswith diffe-rent structures to form corresponding acyl adenosine monophosphate intermediates. Secondly, adenosine monophosphate was replaced by free electrons in the mercaptan group of enzyme A or other acyl receptors by nucleophilic attack to form thioesters. In this study, on the basis of the transcriptome database of Arnebia euchroma, two genes were selected, named AeCCL5(XP_019237476.1) and AeCCL7(XP_019237476.1). Bioinformatics analysis showed that their relative molecular weights were 60.569 kDa and 60.928 kDa, theoretical PI were 8.59 and 8.92, respectively. They both have transmembrane domains but without signal peptide. By multiple sequence alignment and phylogenetic tree analysis, we found that the similarity between AeCCLs and other plant homologous proteins was not high, and the substrate binding sites of AeCCLs were not highly conserved. The reasons might be that the sequence and structure need to adapt to the changes of new substrates in the process of evolution. In this study, the full-length of AeCCL5 and AecCCL7 were cloned into the expression vector pCDFDuet-1. The proteins of AeCCL5 and AeCCL7 with His-tag were expressed in Escherichia coli. The proteins of AeCCL5 and AeCCL7 were purified by nickel column. In vitro enzymatic reactions proved that both AeCCL5 and AeCCL7 can participate in the upstream phenylpropane pathway of shikonin biosynthesisby catalyzing 4-coumaric acid to produce 4-coumarin-CoA, and then to synthesis p-hydroxybenzoic acid, which is an important precursor of shikonin biosynthesis in A. euchroma.
Boraginaceae/genetics*
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Cloning, Molecular
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Coenzyme A
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Coenzyme A Ligases/genetics*
;
Ligases
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Phylogeny
4.Correlation between rhizosphere environment and content of medicinal components of Arnebia euchroma.
Ji-Zhao ZHANG ; Yuan-Jin QIU ; Ya-Qin ZHAO ; Yu YE ; Guo-Ping WANG ; Jun ZHU ; Xiao-Jin LI ; Cong-Zhao FAN
China Journal of Chinese Materia Medica 2023;48(22):6030-6038
This study aimed to explore the correlation between rhizosphere soil microorganisms of wild Arnebia euchroma and the content of medicinal components to provide guidance for the selection of the ecological planting base. The total DNA of rhizosphere soil microorganisms of wild A. euchroma was extracted, and the microbial community structure of rhizosphere soil microorganisms was analyzed by IlluminaMiseq high-throughput sequencing technology. The content of total hydroxynaphthoquinone pigment and β,β'-dimethylacrylalkannin in medicinal materials was determined by high-performance liquid chromatography(HPLC). The physicochemical pro-perties of rhizosphere soil of wild A. euchroma in main producing areas were determined, and the correlation of soil microbial abundance with index component content and soil physicochemical properties was analyzed by SPSS software. The results showed that the species composition of rhizosphere fungi and bacteria in A. euchroma from different habitats was similar at the phylum and genus levels, but their relative abundance, richness index(Chao1), and community diversity(Simpson) index were different. Correlation analysis showed that the content of available phosphorus in soil was positively correlated with the content of total hydroxynaphthoquinone pigment and β,β'-dimethylacrylalkannin, and the abundance of five fungal genera such as Solicoccozyma and six bacterial genera such as Pseudo-nocardia and Bradyrhizobium was positively correlated with the content of medicinal components in medicinal materials. The abundance of Bradyrhizobium was significantly positively correlated with the content of β,β'-dimethylacrylalkanin. The abundance of fungi such as Archaeorhizomyces was significantly positively correlated with the content of available phosphorus in rhizosphere soil, and Bradyrhizobium was significantly negatively correlated with soil pH. Therefore, the abundance of fungi and bacteria in the rhizosphere of A. euchroma has a certain correlation with the medicinal components and the physicochemical properties of the rhizosphere soil, which can provide a scientific basis for the selection of ecological planting bases in the later stage.
Rhizosphere
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Soil Microbiology
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Bacteria/genetics*
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Phosphorus
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Soil
;
Boraginaceae
5.Multi-component quantitative analysis combined with chromatographic fingerprint for quality assessment of Onosma hookeri.
Er-bu AGA ; Li-juan NIE ; Zhuo-ma DONGZHI ; Ju-le WANG
China Journal of Chinese Materia Medica 2015;40(22):4442-4445
A method for simultaneous determination of the shikonin, acetyl shikonin and β, β'-dimethylpropene shikonin in Onosma hookeri and the chromatographic fingerprint was estabished by HPLC-DAD on an Agilent Zorbax SB-column with a gradient elution of acetonitrile and water at 0.8 mL x min(-1), 30 degrees C. The quality assessment was conducted by comparing the content difference of three naphthoquinone constituents, in combination with chromatographic fingerprint analysis and systems cluster analysis among 7 batches of radix O. hookeri. The content of the three naphthoquinone constituents showed wide variations in 7 bathces. The similarity value of the fingerprints of sample 5, 6 and 7 was above 0.99, sample 2 and 3 above 0.97, sample 3 and 4 above 0.90, and other samples larger than 0.8, which was in concert with the content of three naphthoquinone constituents. The 7 samples were roughly divided into 4 categories. The results above indicated that the using of this medicine is complex and rather spotty. The established HPLC fingerprints and the quantitative analysis method can be used efficiently for quality assessment of O. hookeri.
Boraginaceae
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chemistry
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Chromatography, High Pressure Liquid
;
methods
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Drugs, Chinese Herbal
;
analysis
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Naphthoquinones
;
analysis
;
Plant Roots
;
chemistry
6.Advances in studies on chemical compositions and pharmacological activities of Arnebiae Radix.
Zhi-lai ZHAN ; Jun HU ; Tan LIU ; Li-ping KANG ; Tie-gui NAN ; Lan-ping GUO
China Journal of Chinese Materia Medica 2015;40(21):4127-4135
This article mainly summarise the results of the chemical compositions and their pharmacological activities of Arnebiae Radix since 1966. The chemistry components isolated from Arnebiae Radix are mainly naphthoquinone, monoterpene phenol and quinone, phenolic acids and their salts, alkaloids, aliphatic and esters. Pharmacological results showed that the chemical compositions and the extracts of Arnebiae Radix have antibacterial, anti-inflammatory, anti-viral, hepatoprotection, antioxidant, anti-tumor and immune function and other activities. This article hopefully to provide a reference for further research, development and utilization of Arnebiae Radix.
Animals
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Boraginaceae
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chemistry
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Drugs, Chinese Herbal
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chemistry
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pharmacology
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Humans
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Molecular Structure
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Plant Roots
;
chemistry
7.Chemical contituents in leaves of Ehretia thyrsiflora.
Li LI ; Renbing SHI ; Tana WU-LAN ; Liji XU ; Yong PENG ; Peigen XIAO
China Journal of Chinese Materia Medica 2010;35(3):331-332
OBJECTIVETo investigate the chemical constituents of Ehretia thyrsiflora.
METHODCompounds were isolated with silica gel, Sephadex LH-20 and RP-C18 colum chromatography. Their structures were elucidated by means of physico-chemical properties and spectral analysis.
RESULTSix compounds were isolated and identified as beta-sitosterol (1), ethyl caffeate (2), 2-methoxyl benzoic acid octyl ester (3), tetradecenoic acid, 2,3-dihydroxypropyl ester (4), daucoster (5), allantoin (6).
CONCLUSIONCompounds 1-5 were obtained from this species for the first time. Compounds 2-5 were obtained from the genus Ehretia for the first time.
Allantoin ; chemistry ; Boraginaceae ; chemistry ; Caffeic Acids ; chemistry ; Magnetic Resonance Spectroscopy ; Plant Leaves ; chemistry ; Sitosterols ; chemistry
8.Studies on flash extraction methods of Arnebia euchroma.
Qing-Ju MENG ; Hong YI ; Hua YANG ; Li-Wei ZHU ; Jing FENG ; Xiao-Qian LIU
China Journal of Chinese Materia Medica 2013;38(14):2302-2305
The extraction of functional components from radix of Arnebia euchroma was optimized using orthogonal design based on the extraction yields of shikonin, and hydroxyl-naphthoquinone pigments. The data processing was carried out with the multiple guidelines grading method for optimizing the extraction condition. Compared with the traditional method (refluxing and ultrasonic extraction), the flash extraction method was more efficient The optimal conditions were as follows: 95% ethanol extract 3 times with 90 s for each. Under these conditions, the extraction yields of shikonin, and hydroxyl-naphthoquinone pigments were 93.16%, 93.89%, respectively, and the dry extract rate was 5.16%. In conclusion, the result showed that the flash extraction technology was appropriate, stable and feasible.
Boraginaceae
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chemistry
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Drugs, Chinese Herbal
;
chemistry
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Naphthoquinones
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chemistry
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Pigments, Biological
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chemistry
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Plant Extracts
;
chemistry
9.Overexpression and RNAi vectors built for key secondary metabolic pathway genes PAL, HMGR, PGT of Arnebia euchroma.
Teng XIE ; Yu-Zhong LIU ; Sheng WANG ; Tan LIU ; Li-Ping KANG ; Lan-Ping GUO
China Journal of Chinese Materia Medica 2014;39(23):4538-4543
Arnebia euchroma is the main source for medicinal herb Zicao. and its most important component shikonin compounds have high medicinal and industrial value. This research is aimed to build overexpression vectors and RNAi vectors for key secondary metabolism genes of A. euchroma, and bulid platform for constructions of related transgenic lines using GATEWAY technology. To build genetic material based genetic research platform is to provide a great convenience for digging and functional verification of the genes on secondary metabolic pathway, and also to fill the gaps in transgenic research of A. euchroma. This study is also important for the cultivation of shikonin high-yielding strains of A. euchroma.
Boraginaceae
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genetics
;
metabolism
;
Genetic Vectors
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genetics
;
metabolism
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Plant Proteins
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genetics
;
metabolism
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RNA Interference
;
Secondary Metabolism
10.Growth and accumulation of shikonin compounds of two kinds of cells in suspension culture of Arnebia euchroma.
Sheng WANG ; Teng XIE ; He-Chun YE ; Shu-Fang LIN ; Yan ZHANG ; Mei-Lan CHEN ; Lu-Qi HUANG ; Lan-Ping GUO
China Journal of Chinese Materia Medica 2013;38(8):1138-1144
Via studying the phenotype, growth curve and secondary metabolites of two kinds of suspension culture cell of Arnebia euchroma, the kinetics parameters of growth and accumulation of shikonin compounds in cell suspension culture of A. euchroma was obtained through simulating and modeling. This Study found that the red high-yielding one was a fine cell line for producing shikonin compounds, and the white low-yielding one may be a mutant. The first-order and second-order derivative of the fitting function were obtained by fitting the Logistic model of growth curve to get the growth rate and growth acceleration curve of the suspended cells. It is found that the best period to subculture was the 15th day cultured in fresh medium, and the best period of the induction process was the 13th-14th day. When compared the growth rate of the red line and the shikonin compounds accumulation curve, it is found that the rapid growth of the biomass of cells was not conducive to the synthesis and accumulation of shikonin compounds.
Boraginaceae
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chemistry
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cytology
;
metabolism
;
Cell Culture Techniques
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Cell Proliferation
;
Naphthoquinones
;
metabolism
;
Plant Cells