1.Analysis of three patients with KBG syndrome and epileptic seizures due to variants of ANKRD11 gene.
Chao LIU ; Xianhui REN ; Luojun WANG ; Zihan WEI ; Mi CAO ; Guoyan LI ; Zhenyu WU ; Yanchun DENG
Chinese Journal of Medical Genetics 2022;39(5):479-483
OBJECTIVE:
To summarize the clinical phenotype and genotypic characteristics of 3 patients with KBG syndrome and epileptic seizure.
METHODS:
Clinical data of the patients were collected. Family-trio whole exon sequencing (WES) was carried out. Candidate variants were verified by Sanger sequencing.
RESULTS:
Patients 1 and 2 were boys, and patient 3 was an adult woman. All patients had epileptic seizures and mental deficiency. Their facial features included triangular face, low hair line, hypertelorism, large forward leaning auricles, broad nasal bridge, upturned nostrils, long philtrum, arched upper lip, and macrodontia. The two boys also had bilateral Simian creases. WES revealed that the three patients all harbored heterozygous de novo frameshift variants in exon 9 of the ANKRD11 gene including c.2948delG (p.Ser983Metfs*335), c.5397_c.5398insC (p.Glu1800Argfs*150) and c.1180_c.1184delAATAA (p.Asn394Hisfs*42). So far 291 patients with ANKRD11 gene variants or 16q24.3 microdeletions were reported, with over 75% being de novo mutations.
CONCLUSION
Above findings have enriched the spectrum of ANKRD11 gene mutations underlying KBG syndrome. WES is helpful for the early diagnosis of KBG, and provided reference for genetic counseling of this disease.
Abnormalities, Multiple/genetics*
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Bone Diseases, Developmental/genetics*
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Epilepsy/genetics*
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Facies
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Humans
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Intellectual Disability/genetics*
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Phenotype
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Repressor Proteins/genetics*
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Seizures/genetics*
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Tooth Abnormalities/genetics*
2.Gender difference in clinical manifestations of KBG syndrome due to variants of ANKRD11 gene.
Yuyao YANG ; Pengqiang WEN ; Zhe SU ; Li WANG ; Xiu ZHAO
Chinese Journal of Medical Genetics 2021;38(7):663-666
OBJECTIVE:
To explore gender difference in the clinical manifestations of two children with Keishi-Bukuryo-Gan syndrome (KBGS).
METHODS:
Clinical manifestations of the two children were reviewed. Genetic testing was carried out through next generation sequencing (NGS). Treatment was summarized, and the prognosis was followed up.
RESULTS:
Both children showed particular appearance including megatooth, abnormal hair distribution, hands' abnormality and language development delay. NGS revealed that both children have carried pathogenic variants of the ANKRD11 gene (c.1903_1907del and c.4911delT), which resulted in shifting of amino acid sequences starting from the Lysine and Proline at positions 635 and 1638, respectively. The female patient exhibited central precocious puberty. Her height has increased by 13 cm, and sex characteristics has retracted after treatment with leuprorelin for 23 months and recombinant human growth hormone for 1 month.
CONCLUSION
Comparison of the two cases with different genders and summary of previously reported cases found that male KBGS patients have more obvious dysmorphisms such as triangular face, synophrys, ocular hypertelorism and vertebral body abnormality, with higher morbidity of epilepsy, mental retardation, autism, congenital heart disease, immune thrombocytopenia and other complications. KBGS is an autosomal dominant disease featuring more evident peculiar appearance and global development delay. Male patients often have multi-system involvement, and multidisciplinary cooperation is required for early recognition of particular features in order to improve the prognosis.
Abnormalities, Multiple
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Bone Diseases, Developmental
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Child
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Facies
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Female
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Humans
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Intellectual Disability
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Male
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Phenotype
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Repressor Proteins/genetics*
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Sex Characteristics
;
Tooth Abnormalities
3.Clinical and genetic analysis of three children with KBG syndrome due to novel variants of ANKRD11 gene.
Li WANG ; Jingjing LI ; Jinghan XU ; Yanlei XU ; Junbo WANG ; Yin FENG ; Xiangdong KONG
Chinese Journal of Medical Genetics 2023;40(1):1-6
OBJECTIVE:
To explore the clinical and genetic characteristics of three children with KBG syndrome.
METHODS:
Clinical data of the three children from two families who have presented at the First Affiliated Hospital of Zhengzhou University between October 2019 and September 2020 and their family members were collected. Trio-whole exome sequencing (trio-WES) and Sanger sequencing were carried out.
RESULTS:
All children had feeding difficulties, congenital heart defects and facial dysmorphism. The sib- pair from family 1 was found to harbor a novel de novo heterozygous c.6270delT (p.Q2091Rfs*84) variant of the ANKRD11 gene, whilst the child from family 2 was found to harbor a novel heterozygous c.6858delC (p.D2286Efs*51) variant of the ANKRD11 gene, which was inherited from his mother who had a mild clinical phenotype.
CONCLUSION
The heterozygous frameshift variants of the ANKRD11 gene probably underlay the disease in the three children. Above findings have enriched the spectrum of the ANKRD11 gene variants.
Female
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Child
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Humans
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Abnormalities, Multiple/genetics*
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Intellectual Disability/genetics*
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Bone Diseases, Developmental/genetics*
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Tooth Abnormalities/genetics*
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Facies
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Repressor Proteins/genetics*
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Mothers
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Mutation
4.Prenatal diagnosis and genetic analysis of 17 fetuses with skeletal dysplasia.
Jianyang LU ; Lei HUAI ; Caijuan LU ; Yafeng WU ; Huiqing ZHU ; Xin ZHAN ; Hongbo ZHAI
Chinese Journal of Medical Genetics 2020;37(11):1217-1221
OBJECTIVE:
To explore strategies of prenatal genetic testing for fetuses featuring abnormal skeletal development.
METHODS:
Clinical data of 17 fetuses with skeletal dysplasia was collected. The results of genetic testing and outcome of pregnancy were analyzed.
RESULTS:
For 12 fetuses, the femur-to-foot length ratio was less than 0.9. Thirteen fetuses had a positive finding by genetic testing. One fetus was diagnosed with chromosomal aneuploidy, three were diagnosed with microdeletion/microduplications, and nine were diagnosed with hereditary bone diseases due to pathological variants of FGFR3, COL1A2, GPX4 or ALPL genes.
CONCLUSION
For fetuses with skeletal dysplasia characterized by short femur, in addition to chromosomal karyotyping and microarray analysis, sequencing of FGFR3 and other bone disease-related genes can improve the diagnostic rate.
Bone Diseases, Developmental/genetics*
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Female
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Fetus/diagnostic imaging*
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Genetic Testing
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Humans
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Karyotyping
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Pregnancy
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Prenatal Diagnosis
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Receptor, Fibroblast Growth Factor, Type 3/genetics*
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Ultrasonography, Prenatal
5.CNV-seq analysis of copy number variations in 217 fetuses with nasal bone dysplasia.
Panlai SHI ; Yaqin HOU ; Duo CHEN ; Ning LIU ; Zhihui JIAO ; Yin FENG ; Gege SUN ; Ruonan ZHU ; Xiangdong KONG
Chinese Journal of Medical Genetics 2022;39(10):1076-1079
OBJECTIVE:
To assess the diagnostic value of copy number variation sequencing (CNV-seq) in the genetic etiology of fetuses with nasal bone dysplasia (NBD).
METHODS:
A total of 217 fetuses discovered with NBD from December 2017 to December 2020 were divided into the isolated NBD group and NBD combined with other anomalies group, for which copy number variations (CNVs) were analyzed.
RESULTS:
A total of 40 fetal abnormalities were detected in 217 cases, with an overall abnormal rate of 18.4%. These included 31 cases with aneuploidies (14.3%, 31/217) and 9 cases with genomic CNVs (4.1%, 9/217). Five cases of trisomy 21 (3.5%, 5/144) and two CNVs cases with unknown clinical significance (1.4%, 2/144) were detected in the isolated group. As for the combined NBD group, 26 aneuploidies (35.6%, 26/73), including 19 cases with trisomy 21, 6 cases with trisomy 18, 1 case with trisomy 13, 5 cases with pathogenic CNVs (6.8%, 5/73), and 2 cases with CNVs of unknown clinical significance (2.7%, 2/73) were detected. A significant difference was detected between the two groups (P < 0.01).
CONCLUSION
The detection rate of CNV-seq is high for chromosomal aneuploidies and pathogenic CNVs in fetuses with NBD, particularly in those combined with other ultrasonic abnormalities.
Aneuploidy
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Bone Diseases, Developmental
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Chromosome Aberrations
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DNA Copy Number Variations
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Down Syndrome/genetics*
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Female
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Fetus/abnormalities*
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Humans
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Pregnancy
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Prenatal Diagnosis
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Trisomy
6.Clinical and genetic characteristics of 9 rare cases with coexistence of dual genetic diagnoses.
Dan Dan TAN ; Yi Dan LIU ; Yan Bin FAN ; Cui Jie WEI ; Dan Yang SONG ; Hai Po YANG ; Hong PAN ; Wei Li CUI ; Shan Shan MAO ; Xiang Ping XU ; Xiao Li YU ; Bo CUI ; Hui XIONG
Chinese Journal of Pediatrics 2023;61(4):345-350
Objective: To analyze the clinical and genetic characteristics of pediatric patients with dual genetic diagnoses (DGD). Methods: Clinical and genetic data of pediatric patients with DGD from January 2021 to February 2022 in Peking University First Hospital were collected and analyzed retrospectively. Results: Among the 9 children, 6 were boys and 3 were girls. The age of last visit or follow-up was 5.0 (2.7,6.8) years. The main clinical manifestations included motor retardation, mental retardation, multiple malformations, and skeletal deformity. Cases 1-4 were all all boys, showed myopathic gait, poor running and jumping, and significantly increased level of serum creatine kinase. Disease-causing variations in Duchenne muscular dystrophy (DMD) gene were confirmed by genetic testing. The 4 children were diagnosed with DMD or Becker muscular dystrophy combined with a second genetic disease, including hypertrophic osteoarthropathy, spinal muscular atrophy, fragile X syndrome, and cerebral cavernous malformations type 3, respectively. Cases 5-9 were clinically and genetically diagnosed as COL9A1 gene-related multiple epiphyseal dysplasia type 6 combined with NF1 gene-related neurofibromatosis type 1, COL6A3 gene-related Bethlem myopathy with WNT1 gene-related osteogenesis imperfecta type XV, Turner syndrome (45, X0/46, XX chimera) with TH gene-related Segawa syndrome, Chromosome 22q11.2 microduplication syndrome with DYNC1H1 gene-related autosomal dominant lower extremity-predominant spinal muscular atrophy-1, and ANKRD11 gene-related KBG syndrome combined with IRF2BPL gene-related neurodevelopmental disorder with regression, abnormal movement, language loss and epilepsy. DMD was the most common, and there were 6 autosomal dominant diseases caused by de novo heterozygous pathogenic variations. Conclusions: Pediatric patients with coexistence of double genetic diagnoses show complex phenotypes. When the clinical manifestations and progression are not fully consistent with the diagnosed rare genetic disease, a second rare genetic disease should be considered, and autosomal dominant diseases caused by de novo heterozygous pathogenic variation should be paid attention to. Trio-based whole-exome sequencing combining a variety of molecular genetic tests would be helpful for precise diagnosis.
Humans
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Abnormalities, Multiple
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Retrospective Studies
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Intellectual Disability/genetics*
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Bone Diseases, Developmental/complications*
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Tooth Abnormalities/complications*
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Facies
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Muscular Dystrophy, Duchenne/complications*
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Muscular Atrophy, Spinal/complications*
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Carrier Proteins
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Nuclear Proteins
7.Transmission disequilibrium test for congenital dislocation of the hip and HOXB9 gene or COL1AI gene.
Jun JIANG ; Hong-wei MA ; Yao LU ; Yue-ping WANG ; Yang WANG ; Qi-wei LI ; Shi-jun JI
Chinese Journal of Medical Genetics 2003;20(3):193-195
OBJECTIVETo detect the correlation between the congenital dislocation of the hip (CDH) and HOXB9 gene or COL1AI gene.
METHODSA microsatellite DNA marker D17S1820 was chosen in the region of chromosome 17q21 where exists the HOXB9 gene which regulates the embryonic limb development and exists the COL1AI gene. The genotypes of 303 members in 101 CDH nuclear family trios were analyzed by the techniques of polymerase chain reaction(PCR) and denaturing polyacrylamide gel electrophoresis. Then transmission disequilibrium test (TDT) was used to test the data of genotypes.
RESULTSThere exist 12 alleles at this polymorphic locus. Transmission disequilibrium was found between CDH and the fourth allele of D17S1820 (chi-square=6.025,P=0.014).
CONCLUSIONCDH is associated with the region of chromosome 17q21. HOXB9 gene and/or COL1AI gene may be susceptibility genes of CDH.
Bone Diseases, Developmental ; genetics ; Child ; Chromosomes, Human, Pair 17 ; genetics ; Family ; Female ; Gene Transfer Techniques ; Genes, Homeobox ; genetics ; Genetic Predisposition to Disease ; Hip Dislocation ; genetics ; pathology ; Homeodomain Proteins ; genetics ; Humans ; Ischium ; Male ; Musculoskeletal Abnormalities ; genetics ; Polymerase Chain Reaction
8.Acromicric Dysplasia Caused by a Novel Heterozygous Mutation of FBN1 and Effects of Growth Hormone Treatment.
Hyung Suk JIN ; Ho young SONG ; Sung Yoon CHO ; Chang Seok KI ; Song Hyun YANG ; Ok Hwa KIM ; Su Jin KIM
Annals of Laboratory Medicine 2017;37(1):92-94
No abstract available.
Bone Diseases, Developmental/diagnosis/drug therapy/*genetics
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Child
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Fibrillin-1/*genetics
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Hand/diagnostic imaging
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Heterozygote
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Human Growth Hormone/therapeutic use
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Humans
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Limb Deformities, Congenital/diagnosis/drug therapy/*genetics
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Male
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Pelvis/diagnostic imaging
9.A de novo Microdeletion of ANKRD11 Gene in a Korean Patient with KBG Syndrome.
Ji Hun LIM ; Eul Ju SEO ; Yoo Mi KIM ; Hyun Ju CHO ; Jin Ok LEE ; Chong Kun CHEON ; Han Wook YOO
Annals of Laboratory Medicine 2014;34(5):390-394
KBG syndrome is a very rare genetic disorder characterized by macrodontia of upper central incisors, global developmental delay, distinctive craniofacial features, short stature, and skeletal anomalies. Ankyrin repeat domain 11 gene (ANKRD11) has recently been identified as a causal factor of this syndrome. We describe a 6-yr-old Korean boy with features of KBG syndrome. The patient had a short stature, macrodontia, dysmorphic facial features, speech and motor delay with intellectual disability, and partial seizures as indicated by the electroencephalogram, but he was neither autistic nor had autism spectrum disorders. Using high-resolution oligonucleotide array comparative genomic hybridization, we identified a heterozygous 240-kb deletion at 16q24.3 corresponding to ANKRD11. This patient provided additional evidence on the influence of ANKRD11 in KBG syndrome and suggested that deletion limited to ANKRD11 is unlikely to cause autism.
Abnormalities, Multiple/diagnosis/*genetics
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Asian Continental Ancestry Group/*genetics
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Bone Diseases, Developmental/diagnosis/*genetics
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Child
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Chromosomes, Human, Pair 16
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Comparative Genomic Hybridization
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Electroencephalography
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Facies
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Gene Deletion
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Heterozygote
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Humans
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Intellectual Disability/diagnosis/*genetics
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Male
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Phenotype
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Repressor Proteins/*genetics
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Republic of Korea
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Tooth Abnormalities/diagnosis/*genetics