1.Expressed sequence tags analysis of Blattella germanica.
Hyang Suk CHUNG ; Tai Hyun YU ; Bong Jin KIM ; Sun Mi KIM ; Joo Yeong KIM ; Hak Sun YU ; Hae Jin JEONG ; Mee Sun OCK
The Korean Journal of Parasitology 2005;43(4):149-156
Four hundred and sixty five randomly selected clones from a cDNA library of Blattella germanica were partially sequenced and searched using BLAST as a means of analyzing the transcribed sequences of its genome. A total of 363 expressed sequence tags (ESTs) were generated from 465 clones after editing and trimming the vector and ambiguous sequences. About 42% (154/363) of these clones showed significant homology with other data base registered genes. These new B. germanica genes constituted a broad range of transcripts distributed among ribosomal proteins, energy metabolism, allergens, proteases, protease inhibitors, enzymes, translation, cell signaling pathways, and proteins of unknown function. Eighty clones were not well-matched by database searches, and these represent new B. germanica-specific ESTs. Some genes which drew our attention are discussed. The information obtained increases our understanding of the B. germanica genome.
Sequence Alignment
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Reverse Transcriptase Polymerase Chain Reaction
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Molecular Sequence Data
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Male
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Female
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*Expressed Sequence Tags
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Blattellidae/*genetics
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Base Sequence
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Animals
2.Cloning and expression of trypsin-encoding cDNA from Blattella germanica and its possibility as an allergen.
Mee Sun OCK ; Bong Jin KIM ; Sun Mi KIM ; Kang Hyun BYUN
The Korean Journal of Parasitology 2005;43(3):101-110
In this study, the trypsin gene (bgtryp-1) from the German cockroach, Blattella germanica, was cloned via the immunoscreening of patients with allergies to cockroaches. Nucleotide sequence analysis predicted an 863 bp open reading frame which encodes for 257 amino acids. The deduced amino acid sequence exhibited 42-57% homology with the serine protease from dust mites, and consisted of a conserved catalytic domain (GDSGGPLV). bgtryp-1 was determined by both Northern and Southern analysis to be a 0.9 kb, single-copy gene. SDS-PAGE and Western blotting analyses of the recombinant protein (Bgtryp-1) over-expressed in Escherichia coli revealed that the molecular mass of the expressed protein was 35 kDa, and the expressed protein was capable of reacting with the sera of cockroach allergy patients. We also discussed the possibility that trypsin excreted by the digestive system of the German cockroach not only functions as an allergen, but also may perform a vital role in the activation of PAR-2.
Allergens/analysis/chemistry/*genetics
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Amino Acid Sequence
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Base Sequence
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Blattellidae/*genetics
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Blotting, Western
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Catalytic Domain/genetics
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DNA, Complementary/genetics
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Escherichia coli/metabolism
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Female
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*Genes, Insect
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Humans
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Male
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Molecular Sequence Data
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Molecular Weight
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Receptor, PAR-2/metabolism
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Recombinant Proteins/analysis/biosynthesis/chemistry
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Research Support, Non-U.S. Gov't
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Sequence Alignment
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Sequence Homology, Amino Acid
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Trypsin/analysis/chemistry/*genetics