1.Unified principles of thalamo-cortical processing: the neural switch.
Urs RIBARY ; S M DOESBURG ; L M WARD
Biomedical Engineering Letters 2017;7(3):229-235
It has been reported that cross-frequency interactions may play an important role in local processing within thalamus and neocortex, as well as information transfer between subcortical and cortico-cortical brain regions. Strong commonalities in rhythmic network properties have been observed across recording techniques and task demands, but strong neuroscientific theories to situate such observations within a unified framework with direct relevance to explain neuropathologies remain scarce. Based on a comprehensive review of animal and human literature, we probe and introduce a neurophysiological framework to explain how coordinated cross-frequency and interregional oscillatory cortical dynamics underlie typical and atypical brain activation, and the formation of distributed functional ensembles supporting cortical networks underpinning perception and cognition. We propose that local regional activation by an external stimulus via a sensory pathway entails (1) attenuated alpha (8–14 Hz) and increased theta (4–8 Hz) and gamma (30–50 Hz) oscillatory activity, and (2) increased interactions among theta and gamma rhythms. These local dynamics also mediate the integration of activated neural populations into largescale functional assemblies through neuronal synchronization. This comprehensive perspective into the animal and human literature indicates a further thinking beyond synchrony and connectivity and the readiness for more hypothesis-driven research and modeling toward unified principles of thalamo-cortical processing. We further introduced such a possible framework: “The ATG switch”. We also discussed evidence that alpha-theta-gamma dynamics emerging from thalamocortical interactions may be implicated and disrupted in numerous neurological and neuropsychiatric conditions.
Animals
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Brain
;
Cognition
;
Gamma Rhythm
;
Humans
;
Neocortex
;
Neurons
;
Neuropathology
;
Thalamus
;
Thinking
2.Increasing the quality of reconstructed signal in compressive sensing utilizing Kronecker technique.
H ZANDDIZARI ; S RAJAN ; Houman ZARRABI
Biomedical Engineering Letters 2018;8(2):239-247
Quality of reconstruction of signals sampled using compressive sensing (CS) algorithm depends on the compression factor and the length of the measurement. A simple method to pre-process data before reconstruction of compressively sampled signals using Kronecker technique that improves the quality of recovery is proposed. This technique reduces the mutual coherence between the projection matrix and the sparsifying basis, leading to improved reconstruction of the compressed signal. This pre-processing method changes the dimension of the sensing matrix via the Kronecker product and sparsity basis accordingly. A theoretical proof for decrease in mutual coherence using the proposed technique is also presented. The decrease of mutual coherence has been tested with different projection matrices and the proposed recovery technique has been tested on an ECG signal from MIT Arrhythmia database. Traditional CS recovery algorithms has been applied with and without the proposed technique on the ECG signal to demonstrate increase in quality of reconstruction technique using the new recovery technique. In order to reduce the computational burden for devices with limited capabilities, sensing is carried out with limited samples to obtain a measurement vector. As recovery is generally outsourced, limitations due to computations do not exist and recovery can be done using multiple measurement vectors, thereby increasing the dimension of the projection matrix via the Kronecker product. The proposed technique can be used with any CS recovery algorithm and be regarded as simple pre-processing technique during reconstruction process.
Arrhythmias, Cardiac
;
Electrocardiography
;
Methods
3.Adaptive filtering method for EMG signal using bounded range artificial bee colony algorithm.
Agya Ram VERMA ; Yashvir SINGH ; Bhumika GUPTA
Biomedical Engineering Letters 2018;8(2):231-238
In this paper, an adaptive artefact canceller is designed using the bounded range artificial bee colony (BR-ABC) optimization technique. The results of proposed method are compared with recursive least square and other evolutionary algorithms. The performance of these algorithms is evaluated in terms of signal-to-noise ratio (SNR), mean square error (MSE), maximum error (ME) mean, standard deviation (SD) and correlation factor (r). The noise attenuation capability is tested on EMG signal contaminated with power line and ECG noise at different SNR levels. A comparative study of various techniques reveals that the performance of BR-ABC algorithm is better in noisy environment. Our simulation results show that the ANC filter using BR-ABC technique provides 15 dB improvement in output average SNR, 63 and 83% reduction in MSE and ME, respectively as compared to ANC filter based on PSO technique. Further, the ANC filter designed using BR-ABC technique enhances the correlation between output and pure EMG signal.
Artifacts
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Bees*
;
Electrocardiography
;
Methods*
;
Noise
;
Signal-To-Noise Ratio
4.Review: optically-triggered phase-transition droplets for photoacoustic imaging.
Qiyang CHEN ; Jaesok YU ; Kang KIM
Biomedical Engineering Letters 2018;8(2):223-229
Optically-triggered phase-transition droplets have been introduced as a promising contrast agent for photoacoustic and ultrasound imaging that not only provide significantly enhanced contrast but also have potential as photoacoustic theranostic molecular probes incorporated with targeting molecules and therapeutics. For further understanding the dynamics of optical droplet vaporization process, an innovative, methodical analysis by concurrent acoustical and ultrafast optical recordings, comparing with a theoretical model has been employed. In addition, the repeatability of the droplet vaporization-recondensation process, which enables continuous photoacoustic imaging has been studied through the same approach. Further understanding the underlying physics of the optical droplet vaporization and associated dynamics may guide the optimal design of the droplets. Some innovative approaches in preclinical studies have been recently demonstrated, including sono-photoacoustic imaging, dual-modality of photoacoustic and ultrasound imaging, and super-resolution photoacoustic imaging. In this review, current development of optically triggered phase-transition droplets and understanding on the vaporization dynamics, their applications are introduced and future directions are discussed.
Methods
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Models, Theoretical
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Molecular Probes
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Theranostic Nanomedicine
;
Ultrasonography
;
Volatilization
5.Naphthalocyanines as contrast agents for photoacoustic and multimodal imaging.
Upendra CHITGUPI ; Jonathan F LOVELL
Biomedical Engineering Letters 2018;8(2):215-221
Naphthalocyanines (Ncs) are a family of aromatic small molecule with large near infrared extinction coefficients, making them appealing contrast agent candidates for photoacoustic imaging (PAI). Depending on the substitutions on the Nc periphery or metal center, different spectrally-resolved absorption peak wavelengths are possible, which can enable photoacoustic contrast multiplexing. Owing to their generally poor aqueous solubility, approaches have been developed to modify Ncs or formulate them as biocompatible contrast agents for PAI. Due to their inherent capacity for metal ion chelation, Ncs hold potential for complementary multimodal contrast imaging techniques such as ⁶⁴Cu positron emission tomography. In this research perspective, we highlight some recent reports involving the use of Ncs in PAI.
Absorption
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Contrast Media*
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Humans
;
Multimodal Imaging*
;
Positron-Emission Tomography
;
Solubility
6.Photoacoustic microscopy: principles and biomedical applications.
Biomedical Engineering Letters 2018;8(2):203-213
Photoacoustic microscopy (PAM) has become an increasingly popular technology for biomedical applications, providing anatomical, functional, and molecular information. In this concise review, we first introduce the basic principles and typical system designs of PAM, including optical-resolution PAM and acoustic-resolution PAM. The major imaging characteristics of PAM, i.e. spatial resolutions, penetration depth, and scanning approach are discussed in detail. Then, we introduce the major biomedical applications of PAM, including anatomical imaging across scales from cellular level to organismal level, label-free functional imaging using endogenous biomolecules, and molecular imaging using exogenous contrast agents. Lastly, we discuss the technical and engineering challenges of PAM in the translation to potential clinical impacts.
Contrast Media
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Microscopy*
;
Molecular Imaging
;
Weights and Measures
7.Multimodal intravascular photoacoustic and ultrasound imaging.
Biomedical Engineering Letters 2018;8(2):193-201
The rupture of atherosclerotic plaques is the leading cause of death in developed countries. Early identification of vulnerable plaque is the essential step in preventing acute coronary events. Intravascular photoacoustic (IVPA) technology is able to visualize chemical composition of atherosclerotic plaque with high specificity and sensitivity. Integrated with intravascular ultrasound (IVUS) imaging, this multimodal intravascular IVPA/IVUS imaging technology is able to provide both structural and chemical compositions of arterial walls for detecting and characterizing atherosclerotic plaques. In this paper, we present representative multimodal IVPA/IVUS imaging systems and discuss current scientific innovations, potential limitations, and prospective improvements for characterization of coronary atherosclerosis.
Atherosclerosis
;
Cause of Death
;
Coronary Artery Disease
;
Developed Countries
;
Plaque, Atherosclerotic
;
Prospective Studies
;
Rupture
;
Sensitivity and Specificity
;
Ultrasonography*
8.Multimodal photoacoustic imaging as a tool for sentinel lymph node identification and biopsy guidance.
Biomedical Engineering Letters 2018;8(2):183-191
As a minimally invasive method, sentinel lymph node biopsy (SLNB) in conjunction with guidance methods is the standard method to determine cancer metastasis in breast. The desired guidance methods for SLNB should be capable of precise SLN localization for accurate diagnosis of micro-metastases at an early stage of cancer progression and thus facilitate reducing the number of SLN biopsies for minimal surgical complications. For this, high sensitivity to the administered dyes, high spatial and contrast resolutions, deep imaging depth, and real-time imaging capability are pivotal requirements. Currently, various methods have been used for SLNB guidance, each with their own advantages and disadvantages, but no methods meet the requirements. In this review, we discuss the conventional SLNB guidance methods in this perspective. In addition, we focus on the role of the PA imaging modality on real-time SLN identification and biopsy guidance. In particular, PA-based hybrid imaging methods for precise SLN identification and efficient biopsy guidance are introduced, and their unique features, advantages, and disadvantages are discussed.
Biopsy*
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Breast
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Coloring Agents
;
Contrast Media
;
Diagnosis
;
Lymph Nodes*
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Methods
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Neoplasm Metastasis
;
Optical Imaging
;
Sentinel Lymph Node Biopsy
;
Ultrasonography
9.Fast photoacoustic imaging systems using pulsed laser diodes: a review.
Paul Kumar UPPUTURI ; Manojit PRAMANIK
Biomedical Engineering Letters 2018;8(2):167-181
Photoacoustic imaging (PAI) is a newly emerging imaging modality for preclinical and clinical applications. The conventional PAI systems use Q-switched Nd:YAG/OPO (Optical Parametric Oscillator) nanosecond lasers as excitation sources. Such lasers are expensive, bulky, and imaging speed is limited because of low pulse repetition rate. In recent years, the semiconductor laser technology has advanced to generate high-repetitions rate near-infrared pulsed lasers diodes (PLDs) which are reliable, less-expensive, hand-held, and light-weight, about 200 g. In this article, we review the development and demonstration of PLD based PAI systems for preclinical and clinical applications reported in recent years.
Lasers, Semiconductor
10.Development and clinical translation of photoacoustic mammography.
Tsuyoshi SHIINA ; Masakazu TOI ; Takayuki YAGI
Biomedical Engineering Letters 2018;8(2):157-165
To practically apply photoacoustic (PA) imaging technology in medicine, we have developed prototypes of a photoacoustic mammography (PAM) device to acquire images for diagnosing breast cancer in the Kyoto University/Canon joint research project (CK project supported by MEXT, Japan). First, the basic ability of the PAM system to visualize the network of blood vessels and the Hb saturation index was evaluated using a prototype of PAM that has a flat scanning detector and is capable of simultaneously acquiring photoacoustic (PA) and ultrasound images. Next, another prototype of a PAM device with hemispherical sensors was developed to improve the visibility of the 3D structure of vessels by reducing the limited view effect. In clinical examination of breast cancer cases, the PAM system allowed 3D visualization of fine vessel networks with a spatial resolution of a half-millimeter and enabled us to determine the features of tumor-related vascular structures in human breast cancer. In addition, the oxygen saturation status of Hb was visualized using two different wavelengths, enabling more precise characterization of the tumor microenvironment. Results of clinical evaluation using our developed prototype of a PAM device confirmed that PA imaging technology has the potential to promote early detection of breast cancer, and realization of its practical use is expected in the near future.
Blood Vessels
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Breast Neoplasms
;
Humans
;
Joints
;
Mammography*
;
Oxygen
;
Tumor Microenvironment
;
Ultrasonography