1.Study on secondary metabolites of endophytic fungi Penicillium polonicum.
Jing LIU ; Guang-Zhi DING ; Lei FANG ; Shi-Shan YU
China Journal of Chinese Materia Medica 2014;39(20):3974-3977
The PDB culture medium was selected to ferment the endophyte strain, and the secondary metabolites of endophytic fungi Penicillium polonicum were studied. Combined application of Sephadex LH-20, ODS and HPLC chromatographies over the ethyl acetate extract of the fermented culture led to the isolation of 6 compounds. By spectral methods, the structures were elucidated as [3, 5-dihydroxy-2-(7-hydroxy-octanoyl)]-ethylphenylacetate (1), (3, 5-dihydroxy-2- octanoyl)-ethyl phenylacetate (2), (5, 7-di- hydroxy-9-heptyl)-isobenzo pyran-3-one (3), 3-(hydroxymethyl) 4-(1E)-1- propen-1-yl-(1R, 2S, 5R, 6S)-7-oxabicyclo [4.1.0] hept-3-ene-2, 5-diol (4), (E)-2-methoxy-3-(prop-1-enyl) phenol (5) and p-hydroxylphenylethanol (6).
Biological Factors
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chemistry
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metabolism
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Endophytes
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chemistry
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isolation & purification
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metabolism
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Fabaceae
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microbiology
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Fermentation
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Penicillium
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chemistry
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isolation & purification
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metabolism
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Secondary Metabolism
2.Study on secondary metabolites of endophytic fungi Penicillium dangeardii.
Hai-ning LV ; Guang-zhi DING ; Yun-bao LIU ; Jing QU
China Journal of Chinese Materia Medica 2015;40(9):1759-1761
Endophytic fungi Penicillium dangeardii, isolated from Lysidice rhodostegia Hance root, was fermented and the secondary metabolites were studied. By means of Sephadex LH-20 column chromatography, ODS column chromatography and PHPLC over the fermented culture, 5 compounds were isolated. By using ESI-MS and NMR, the structures of the compounds were determined as N-[9-(β- D-ribofuranosyl)-9H-purin-6-yl]-L-aspartic acid (1), 3-caffeoylquinic acid (2), 4-caffeoylquinic acid (3), and 5-caffeoylquinic acid (4), 3-hydroxy-benzoic acid-4-O-β-D-glucopyranoside (5).
Biological Factors
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chemistry
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isolation & purification
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metabolism
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Endophytes
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chemistry
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metabolism
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Fabaceae
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microbiology
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Fermentation
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Molecular Structure
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Penicillium
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chemistry
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metabolism
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Secondary Metabolism
3.Analysis of photosynthetic characteristics and its influencing factors of medicinal plant Mirabilis himalaica.
Qi-Qiang GUO ; Hong QUAN ; Xiao-Zhong LAN ; Lian-Qiang LI ; Hui-E LI
China Journal of Chinese Materia Medica 2014;39(14):2769-2773
To study photosynthetic characteristics and its influencing factors in leaves of medicinal plant Mirabilis himalaica, and provide an evidence for guiding artificial planting and improving the quantity. The light-response and diurnal photosynthesis course of leaves at the booting stages of 1-3 year old M. himalaica were measured with LI-6400 system. The Results showed that the light response curves were fitted well by non rectangle hyperbola equation (R2 > or = 0.98). The values of the maximum photosynthetic rate (Pmax) and light use efficiency of three-year old M. himalaica leaves were higher than those of 1-2 year old individuals. The diurnal variation of net photosynthetic rate (Pn) and stomatal conductance (Gs) of 2-3 year old M. himalaica were typical double-peak curves determinately regulated by stomatal conductance. However, transpiration rate (Tr) of 1-3 year old plants leaves were single-peak curve, which was self-protection of harm reduction caused by the higher temperature at noontime. Correlation analysis showed that the changes between photosynthetic active radiation (PFD), air temperature (T ) and Pn, were significant positive related. Therefore, M. himalaica is a typical sun plant, which should be planted under the sufficient sunshine field and prolong the growing ages suitably in order to improve the yield.
Breeding
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Mirabilis
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growth & development
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metabolism
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Models, Biological
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Photosynthesis
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Temperature
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Time Factors
4.Numerical simulation of chondrocyte growth in 3-D scaffolds.
Hua JIANG ; Yan ZHOU ; Wen-Song TAN
Chinese Journal of Biotechnology 2007;23(1):171-175
Tissue engineering is a promising technique to repair or reconstruct the damaged cartilage in clinical use. However, chondrocyte growth is limited by the mass transport in scaffolds as diffusion is likely to be the primary mechanism. In this study, a mathematical model was developed based on oxygen diffusion and reaction to simulate chondrocyte growth. In order to accord with the fact, effective diffusion coefficients and space limitation were considered in this model and good agreement was found between experimental data and mathematical simulations. Furthermore, relationships established in the model system can be used to optimize the situation in real bioreactors and the design of three-dimensional scaffolds.
Algorithms
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Animals
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Biological Transport
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Cattle
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Cell Culture Techniques
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Cell Proliferation
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Cells, Cultured
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Chondrocytes
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cytology
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metabolism
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Diffusion
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Models, Biological
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Oxygen
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metabolism
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Time Factors
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Tissue Engineering
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methods
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Tissue Scaffolds
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chemistry
5.Effects of bears' bile on the expression of tumor cell p53 protein.
Yu JIN ; Yong-suk MOON ; In-jang CHOI
Chinese Journal of Integrated Traditional and Western Medicine 2006;26 Suppl():86-88
OBJECTIVETo explore the effects of bears' bile on tumor cell p53 protein expression with different gene properties.
METHODSThe effects of bears' bile on the expression of p53 protein in 6 cancer cell strains were determined by Western blot and reverse transcription-polymerase chain reaction (RT-PCR) analysis. Results Western blot analysis showed that the expression of p53 protein in HaCaT, KUMA3, KUMA4 and KUMA6 cell strains with gene mutation were increased, but no change was found in HCT116 and KUMA5 cell strains without gene mutation. There was no quantitative change in p53 mRNA in all cell strains by analysis of p53 mRNA with
CONCLUSIONThe effects of bears' bile on p53 protein expression in cancer cell strains RT-PCR analysis system. could be different based on p53 gene properties,i. e. ,bears' bile only affect p53 protein of mutation type.
Animals ; Bile ; Biological Factors ; pharmacology ; Cell Line, Tumor ; Humans ; RNA, Messenger ; metabolism ; Tumor Suppressor Protein p53 ; genetics ; metabolism ; Ursidae
6.Effects of feeding mode on biological clock and circadian expression of lipid metabolism-related genes in mice.
Journal of Zhejiang University. Medical sciences 2014;43(5):513-520
OBJECTIVETo explore the effects of feeding mode on biological clock and circadian expression of lipids metabolism-related genes in mice.
METHODSNinety healthy male ICR mice were divided into 3 groups with 30 in each: ad libitum-feeding, daytime-feeding and nighttime-feeding groups, in a 12 h to 12 h light-dark cycle. After two weeks of feeding the animals was sacrificed in batches (5 in each batch) at 4, 8, 12, 16, 20 and 24 h, the circadian expression of lipids metabolism-related genes in the liver and brain was detected by real time quantitative RT PCR at 6 time points.
RESULTSThe circadian oscillator in the brain was more sensitive to alteration of feeding mode than that in the liver, nighttime feeding decreased peak mRNA levels of Cry2, Per1, and Per2 (5.5, 4.3 and 7.1 folds, respectively) in the brain. However, there was no difference in the expression rhythm of hepatic clock genes between nighttime-feeding and ad libitum group. In addition, changed feeding mode significantly decreased the peak value of Rev erbα (2 folds for daytime feeding, 3.4 folds for nighttime feeding) and Dbp (10.6 folds for daytime feeding, 2.8 folds for nighttime feeding), which two had opposite expression mode in different feeding modes. Different expression rhythm of lipid metabolism related genes SREBP1-c, PPARα, FAS, and CPT was shown with decreased mRNA expression levels of SREBP1-c and PPARα in daytime feeding (5.5 folds, 4 folds) and nighttime feeding (4.4 folds, 4.8 folds).
CONCLUSIONChanging the feeding mode could entrain circadian oscillators both in the brain and liver. What is more, hepatic circadian oscillators couple with the feeding time.
Animals ; Biological Clocks ; Circadian Rhythm ; Feeding Methods ; Lipid Metabolism ; Liver ; metabolism ; Male ; Mice ; Mice, Inbred ICR ; RNA, Messenger ; Time Factors
7.Quantification of the curing effects of phenanthridine on yeast prion PSI+.
Zhengwei ZHONG ; Lijie WANG ; Hui XIE ; Hui LI ; Jianwei HE ; Youtao SONG
Chinese Journal of Biotechnology 2012;28(6):737-746
In order to quantify the curing effects of phenanthridine on yeast prion, we introduced semi-denaturing agarose gel electrophoresis and fluorescence recovery after photobleaching techniques to quantify the curing effects of phenanthridine on yeast prion at the protein and cellular levels with the [PSI+] yeast strain expressing GFP-Sup35p (NGMC). The results showed that these two approaches could precisely quantify the curing effects of phenanthridine on [PSI+] cells. After a treatment for 1 through 5 days with phenanthridine, the curing rates of [PSI+] cells were 0%, 0%, 51.7%, 87.5% and 94.4%, respectively. Meanwhile, we quantified the sizes of Sup35p polymers in phenanthridine induced pink phenotype cells. The aggregation status in 1-2 days phenanthridine treated cells were similar to those in [PSI+] cells, while the aggregation status in 3-5 days phenanthridine treated cells were similar to those in [psi(-)] cells.
Computer Simulation
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Models, Biological
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Peptide Termination Factors
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metabolism
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Phenanthridines
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pharmacology
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Prions
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drug effects
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genetics
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metabolism
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Saccharomyces cerevisiae
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cytology
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drug effects
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metabolism
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Saccharomyces cerevisiae Proteins
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metabolism
8.Differences in nitric oxide release and endothelium-derived hyperpolarizing factor-mediated hyperpolarization between human radial artery and saphenous vein.
Zhi-gang LIU ; Xiao-cheng LIU ; Guo-wei HE
Chinese Journal of Surgery 2011;49(12):1128-1131
OBJECTIVETo compare the differences in nitric oxide (NO) release and endothelium-derived hyperpolarizing factor (EDHF)-mediated hyperpolarization between human radial artery (RA) and saphenous vein (SV) through direct measurement of NO and membrane potential.
METHODSRA (n = 8), SV (n = 23), and surgical prepared SV (PV, n = 9, dilatation with normal saline solution at a pressure of 100 - 600 mmHg, 1 mmHg = 0.133 kPa) segments (5 mm long) taken from patients undergoing coronary artery bypass grafting were placed in an organ chamber. The NO-sensitive electrode and intracellular glass microelectrode was used to directly measure the NO release and the membrane potential changes in response to acetylcholine (ACh) and bradykinin (BK) before and after incubation with NG-nitro-L-arginine, indomethacin, and oxyhemoglobin.
RESULTSThe basal release of NO in RA [(11.9 ± 1.8) nmol/L] was significantly greater than that in SV [(9.9 ± 2.8) nmol/L, P = 0.041]. BK-induced NO release in RA was lower than that in SV [for BK 10(-7) mol/L: (25.8 ± 3.6) nmol/L vs. (43.7 ± 8.2) nmol/L, P = 0.006]. Both basal and ACh- or BK-induced NO release in PV were significantly reduced [basal release: PV (3.4 ± 1.4) nmol/L; P = 0.006 vs. RA; P = 0.002 vs. SV; stimulated release: for ACh 10(-5) mol/L: PV (4.8 ± 3.2) nmol/L; vs. RA (28.6 ± 7.9) nmol/L, P = 0.005; vs. SV (27.4 ± 3.7) nmol/L, P = 0.003; for BK 10(-7) mol/L: PV (7.0 ± 3.6) nmol/L; vs. RA (25.8 ± 3.6) nmol/L, P = 0.016; vs. SV (43.7 ± 8.2) nmol/L, P = 0.004]. EDHF-mediated hyperpolarization was greater in RA than that in SV [ACh 10(-5) mol/L: (-9.7 ± 1.9) mV vs. (-4.5 ± 1.1) mV, n = 17, P = 0.002].
CONCLUSIONSRA is superior to SV in terms of NO basal release and EDHF-mediated endothelial function. Surgical preparation and pressure dilatation may severely impair the NO-mediated endothelial function of SV, which may contribute to the poor long-term patency of SV coronary graft.
Biological Factors ; metabolism ; Endothelial Cells ; metabolism ; physiology ; Endothelium, Vascular ; cytology ; metabolism ; Female ; Humans ; Male ; Membrane Potentials ; physiology ; Middle Aged ; Nitric Oxide ; metabolism ; Radial Artery ; cytology ; Saphenous Vein ; cytology
9.The lipid droplet: A conserved cellular organelle.
Protein & Cell 2017;8(11):796-800
The lipid droplet (LD) is a unique multi-functional organelle that contains a neutral lipid core covered with a phospholipid monolayer membrane. The LDs have been found in almost all organisms from bacteria to humans with similar shape. Several conserved functions of LDs have been revealed by recent studies, including lipid metabolism and trafficking, as well as nucleic acid binding and protection. We summarized these findings and proposed a hypothesis that the LD is a conserved organelle.
Animals
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Bacteria
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metabolism
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ultrastructure
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Biological Evolution
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Cholesterol Esters
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metabolism
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Humans
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Lipid Droplets
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chemistry
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metabolism
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ultrastructure
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Lipid Metabolism
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genetics
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Nucleic Acids
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metabolism
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Peptide Initiation Factors
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chemistry
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metabolism
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Protein Binding
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RNA-Binding Proteins
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chemistry
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metabolism
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Ribosome Subunits
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chemistry
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metabolism
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Triglycerides
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metabolism
10.Cloning and expression profile of Bmlin-41 and its regulation by the silkworm microRNA let-7.
Lanting ZHOU ; Ting ZHOU ; Junling GAO ; Wei WANG ; Xiaoyan WU ; Yaxi HUANG ; Qingyou XIA ; Shiping LIU
Chinese Journal of Biotechnology 2016;32(5):635-647
The heterochronic genes regulate cell proliferation and switch development stage transitions. Heterochronic genes might also play important roles in regulating the development of silkworm, but very few of their expression profiles, functions and their relationship with microRNAs are available so far. Firstly, in this work, the primers for cloning Bmlin-41 were designed based on the homologous sequence of known Drosophila melanogaster lin-41, which was used as the query to blast against SilkDB. The obtained full CDS (2 166 bp) of Bmlin-41 encodes 721 amino acids and contains B-box and NHL domains. Then, the spatiotemporal expression patterns of Bmlin-41 were characterized by RT-PCR, quantitative real time PCR as well as our lab's previous silkworm genome microarray data. Bmlin-41 was increasingly expressed from embryonic to adult stage. In diverse tissues of day-3 fifth instar, Bmlin-41 showed the highest accumulation in ovary, secondly in testis and midgut, but very low expression was observed in other tissues. Finally, 3'UTR of Bmlin-41 1 434 bp was cloned by rapid-amplification of cDNA ends (3'RACE) and was predicted to bare two binding sites of bmo-let-7 by using online RNAhybrid. To verify the binding effect, 3'UTR was cloned into psi-CHECK-2 vector and submitted to dual luciferase assay in the S2 cells in vitro. The dual luciferase assay demonstrated that Bmlin-41 was down-regulated by bmo-let-7 mimics and upregulated by bmo-let-7 antagomir, thus confirming the Bmlin-41 is negatively regulated by bmo-let-7. Our work might help further study on the roles of Bmlin-41 and bmo-let-7 and their regulation relationship involved in controlling metamorphosis of silkworm.
3' Untranslated Regions
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Animals
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Bombyx
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Cloning, Molecular
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DNA, Complementary
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Down-Regulation
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Drosophila melanogaster
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Gene Expression Regulation
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Insect Proteins
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genetics
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metabolism
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Metamorphosis, Biological
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MicroRNAs
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metabolism
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Transcription Factors
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genetics
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metabolism