1.Analysis of intraspecific variation of Chinese Carthamus tinctorius L. using AFLP markers.
Lei ZHANG ; Bei-Bei HUANG ; Guo-Yin KAI ; Mei-Li GUO
Acta Pharmaceutica Sinica 2006;41(1):91-96
AIMTo investigate the intraspecific variation of Carthamus tinctorius L. (safflower) and establish foundation for further breeding of safflower germplasm resource and screening the quality correlation genes.
METHODSAmplified fragment length polymorphism (AFLP) was carried out to analyze genetic variation of 28 safflower populations collected in China. Unweighed pair-group method of with arithmetical averages (UPGMA) cluster analysis was used to construct a dendrogram and to estimate the genetic distances among the populations.
RESULTSAll populations could be uniquely distinguished using 12 selected primer combinations. Similarity coefficients ranged from 0.48 to 0.96 among the populations. Dendrogram revealed distinct segregation of all the cultivars into three main groups and one midst group.
CONCLUSIONLimited genetic diversity exists within the tested 28 collections at intra specific level and AFLP-based phyiogeny was not absolutely consistent with that based on morphological characters may be due to the interaction effect between genotype and environment.
Carthamus tinctorius ; genetics ; Cluster Analysis ; DNA, Plant ; analysis ; Genetic Variation ; Phylogeny ; Plants, Medicinal ; genetics ; Polymorphism, Genetic
2.Clinical analysis of thoracoscopy of 30 coalworker's pneumoconiosiswith pleural effusion cases.
Yandong LIANG ; Ruiling JIANG ; Chunxiao YU ; Cheng HUANG
Chinese Journal of Industrial Hygiene and Occupational Diseases 2015;33(7):541-543
OBJECTIVETo investigate the diagnostic value of thoracoscopy on idiopathic coalworker's pneumoconiosis with pleural effusion in general medicine.
METHODRoutine (general medicine) thoracoscopyof patients suffering from iIdiopathiccoalworker's pneumoconiosis with pleural effusion, pathological examination of lesions obtained (direct vision).
RESULTPathological examination revealed grayish-white miliary nodules with multiple protruding nodules, irregular focal pleura thickening, pulmonary congestion, edema, fibrous adhesion. Thorascopy produced a diagnostic rate of 93.3%. Confirmed cases includes 13 cases of tuberculous pleurisy, 11 cases of malignant pleural effusion, 4 cases of cardiac insufficiency with pleural effusion and 2 cases of idiopathic pleural effusion, with no serious complications.
CONCLUSIONThoracoscopy of idiopathic coalworker's pneumoconiosis with pleural effusion is a safe, accurate diagnostic methodin general medicine, and could benefit the establishment of a treatment method quickly, visual observation of the lesions of patients suffering from coalworker's pneumoconiosis with pleural effusion using thoracoscopy, and at the same time offer preliminary investigationof the correlation between the intensity and compactibilityof coal macule distribution and clinical stages of coalworker's Pneumoconiosis.
Anthracosis ; diagnosis ; Heart Failure ; diagnosis ; Humans ; Lung ; pathology ; Pleural Effusion ; diagnosis ; Pleural Effusion, Malignant ; diagnosis ; Pulmonary Edema ; diagnosis ; Thoracoscopy ; Tuberculosis, Pleural ; diagnosis
3.Dynamic changes of the epididymal size after vasectomy: An ultrasonographic observation.
Xiao-hai TAO ; Rui-hua LIU ; Bin-gui SUN ; Yi-min MA ; Bei-mei HUANG ; Yu-zhi YUAN
National Journal of Andrology 2015;21(8):717-719
OBJECTIVETo investigate the dynamic changes of the epididymal size 1 year after vasectomy.
METHODSFifty male volunteers received vasoligation. Before and at 1, 2, 3, 6, and 12 months after operation, we measured the size and detected the internal echoes of the epididymis using color Doppler ultrasonography.
RESULTSThe bilateral epididymides were both thickened post-operatively in all the 50 cases, with statistically significant differences between the baseline and the 1st month, the 1st and the 2nd month, the 2nd and the 3rd month, or the 3rd and the 6th month after surgery (all P < 0.01), but not between the 6th and the 12th month (P > 0.05).
CONCLUSIONWithin 6 months after vasectomy, the bilateral epididymides manifested a progressive thickening, but basically restored their balance of secretion-absorption after 6 months.
Epididymis ; diagnostic imaging ; pathology ; physiology ; Humans ; Male ; Organ Size ; Postoperative Period ; Time Factors ; Ultrasonography, Doppler, Color ; Vasectomy
4.Effects of ultraviolet B-induced autophagy on apoptosis in human skin fibroblasts: a preliminary study
Xu CHEN ; Qingsong ZHANG ; Mei JU ; Faliang REN ; Dan HUANG ; Bei QI ; Kun CHEN ; Baozhu CHANG ; Xinyu LI ; Heng GU
Chinese Journal of Dermatology 2012;45(7):496-500
[Objective] To observe the effects of autophagy induced by different doses of ultraviolet B (UVB) irradiation on the apeptosis in human skin fibroblasts.[Methods] Skin fibroblasts were isolated from the circumcision specimen of a 23-year-old healthy male,and subjected to a primary culture.After 3 to 10 passages,the cells were collected and applied in the following experiment.Methyl thiazolyl tetrazolium (MTT) assay was performed to evaluate the proliferation of some fibroblasts treated with different concentrations (0,0.5,2.0,5.0and 10.0 mmol/L) of 3-methyladenine (3-MA).To qualitatively and quantitatively detect the autophagy in fibroblasts treated with different concentrations of 3-MA and in fibroblasts treated with 3-MA of 0.5 mmol/Lfollowing UVB irradiation,monodansylcadaverine (MDC) staining was carried out,and immunofluorescence was used to detect the expression of microtubule-associated protein 1 light chain (LC3).Some fibroblasts were classified into 8 groups to remain untreated,be irradiated with UVB of 30,50 and 100 mJ/cm2 alone,treated with 3-MA of 0.5 mmol/L alone,or treated with 0.5 mmol/L 3-MA following irradiation with UVB of 30,50 and 100 mJ/cm2,respectively,then,cell apoptosis was qualitatively detected by Hoechst and propidium iodide (PI)staining,and quantitatively detected by flow cytometry with annexin V and PI.[Results] The percentage of autophagic cells was (63.037 ± 5.876) % in fibroblasts treated with starvation condition,significantly decreased to (34.425 ± 5.183) % in fibroblasts treated with 3-MA of 0.5 mmol/L.The expression of LC3 showed a gradually increasing trend from untreated fibroblasts,to fibroblasts irradiated with UVB of 30,50 and 100 mJ/cm2,while the increase was attenuated by the 4-hour treatment with 3-MA immediately after the irradiation.Compared with the other concentrations,the 3-MA of 0.5 mmol/L showed the least influence on the viability of fibroblasts.The addition of 3-MA of 0.5 mmol/L increased the percentage of cells both positive for Hoechst and PI staining in fibroblasts irradiated with UVB of 50 mJ/cm2,but decreased that in fibroblasts irradiated with UVB of 100 mJ/cm2.Similarly,the percentage of middle and late apoptotic cells was significantly higher in fibroblasts irradiated with UVB of 50 mJ/cm2 followed by treatment with 3-MA of 0.5 mmol/L than in those irradiated with UVB of 50 mJ/cm2alone ((10.933 ± 0.839) % vs.(7.267 ± 0.473) %,t =5.20,P< 0.05),but lower in fibroblasts irradiated with UVB of 100 mJ/cm2 followed by treatment with 3-MA of 0.5 mmol/L than in those irradiated with UVB of 100 mJ/cm2alone ( (7.100 ± 0.781 ) % vs.( 1 0.133 ± 0.681 ) %,t =6.29,P < 0.05 ).[Conclusion]s The irradiation with UVB of 50 mJ/cm2 may protect fibroblasts by inducing autophagy and suppressing apoptosis,while the high level of autophagy induced by UVB of 100 mJ/cm2 may lead to autophagic cell death in fibroblasts.
5.Complete genomic analysis of a novel infectious bronchitis virus isolate.
Bei-Xia HU ; Shao-Hua YANG ; Xiu-Mei ZHANG ; Wei ZHANG ; San-Jie CAO ; Chuan-Tian XU ; Qing-Hua HUANG ; Lin ZHANG ; Yan-Yan HUANG ; Xin-Tian WEN
Chinese Journal of Virology 2014;30(4):339-345
The genome of CK/CH/SD09/005, an isolate of infectious bronchitis virus (IBV), was characterized to enable the further understanding of the epidemiology and evolution of IBV in China. Twenty-five pairs of primers were designed to amplify the full-length genome of CK/CH/SD09/005. The nucleotide sequence of CK/CH/SD09/005 was compared with reference IBV strains retrieved from GenBank. The phylogenic relationship between CK/CH/SD09/005 and the reference strains was analyzed based on S1 gene sequences. The complete genome of CK/CH/SD09/005 consisted of 27691 nucleotides (nt), excluding the 5' cap and 3' poly A tail. The whole-genome of CK/CH/SD09/005 shared 97 - 99% nucleotide sequence homology with the GX-NN09032 strain, which was the only complete genome that was closely related to CK/CH/SD09/005. When compared with all reference strains except GX-NN09032, CK/CH/SD09/005 showed the highest similarity to ck/CH/LDL/091022 and SDIB821/2012 (QX-like) in the replicase gene (Gene 1) and 3'UTR, with a sequence identity rate of 97% and 98%, respectively. However, CK/CH/SD09/005 exhibited lower levels of similarity with ck/CH/LDL/091022 and SDIB821/2012 in S-3a-3b-3c/ E-M-5a-5b-N with a sequence identity of 72% - 90%. CK/CH/SD09/005 showed the highest level of nucleotide identity with Korean strain 1011, and Chinese strains CK/CH/LXJ/02I, DK/CH/HN/ZZ2004 and YX10, in ORF 3c/E (97%), 5a (96%), 5b (99%) and N (96%), respectively. ORFs 3a, 3b and M of CK/CH/SD09/005 exhibited no more than 90% homology with the reference strains, excluding GX-NN09032. The phylogenic analysis based on the S1 gene revealed that CK/CH/SD09/005 and 39 published strains were classified into seven clades (genotypes). CK/CH/SD09/005 was distributed in clade IV with several isolates collected between 2007 and 2012. CK/CH/SD09/005 showed 66% - 69% and 72% - 81% nucleotide identities with the IBV strains of other six clades in the S1 and S2 subunits, respectively. More over, multiple substitutions were found throughout the entire S gene of CK/CH/SD09/005, while insertions and deletions were located within the S1 gene. These results indicated that CK/CH/SD09/005 is a novel variant that may be derived from the QX-like strains that are prevalent in China. Multiple genetic mechanisms, including recombinations, mutations, insertions and deletions, are likely to have contributed to the emergence of this IBV strain.
Animals
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Chickens
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China
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Coronavirus Infections
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veterinary
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virology
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Genome, Viral
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Genomics
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Infectious bronchitis virus
;
classification
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genetics
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isolation & purification
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Molecular Sequence Data
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Phylogeny
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Poultry Diseases
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virology
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Sequence Homology, Amino Acid
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Viral Proteins
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chemistry
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genetics
6.Clinical and Scientific Research Application of Electronic Medical Records (EMR) Data
li Bei HUANG ; Tian MEI ; ping Xiang LI ; hui Wen WANG
Journal of Medical Informatics 2017;38(8):11-14
Taking the Sixth Affiliated Hospital of Sun Yat-Sen University as an example,the paper gives detailed examples in clinical and scientific research fields to indicate that the effective utilization of medical data through function reconstruction of the Electronic Medical Records (EMR) system not only brings conveniences to clinical and scientific researchers,but also strengthens medical protection for patients.
8.Chronic obstructive pulmonary disease assessment test score correlated with dyspnea score in a large sample of Chinese patients
Qing-Tao ZHOU ; Jing-Jing MEI ; Bei HE ; Shao-Guang HUANG ; Yi SHI ; Fu-Qiang WEN ; Ming-Wu ZHAO
Chinese Medical Journal 2013;(1):11-15
Background The chronic obstructive pulmonary disease assessment test (CAT) is an easy to use health-related quality of life questionnaire,the modified Medical Research Council (mMRC) dyspnea scale is a classic dyspnea scale which is widely used,while the correlation between them is still not clear.This study investigated the use of the Chinese translation of CAT in chronic obstructive pulmonary disease patients and its correlation with the mMRC dyspnea scale.Methods The multicenter cross-sectional study was conducted in 329 hospitals throughout China from March 1 to April 30,2010.Chronic obstructive pulmonary disease patients completed both the assessment test and the dyspnea scale during a single study visit.Results Six thousand,four hundred and thirty-seven patients were evaluated; 74.9% were male and the mean age was (64.9±10.0) years.Median test scores in dyspnea grades 0 to 4 were 14,16,22,26 and 32,respectively; these differences were statistically significant.The CAT score was moderately correlated with mMRC dyspnea grade (r=0.579,P <0.001).There was no significant difference in mean CAT score between males and females,and patients of high and low socioeconomic status.Pdmary analysis suggested that CAT scores were higher in older patients (>65 years) than in younger patients (≤65 years) and increased with duration of formal education,but these findings were repudiated by further analysis of subgroups according to mMRC dyspnea grade.Conclusions There was no obvious confounding factor influencing use of the CAT in Chinese patients.CAT scores were moderately correlated with the mMRC dyspnea scale.
9.Molecular epidemiological analysis of class I Newcastle disease virus isolated from China in 2008.
Hua-Lei LIU ; Wei ZHANG ; Bei-Xia HU ; Yun-Ling ZHAO ; Yan-Yan HUANG ; Dong-Xia ZHENG ; Fei CHEN ; Cheng-Ying SUN ; Yan-Gong WU ; Xiu-Mei ZHANG ; Zhi-Liang WANG
Chinese Journal of Virology 2009;25(5):382-387
Thirteen isolates of Class I Newcastle disease virus obtained from healthy poultry in China during 2008 were characterized genotypically in this study. All the isolates were proved to be lentogenic strains based on the deduced amino acid sequence of the Fusion protein gene. Molecular epidemiological analysis showed that 13 isolates could be subdivided into 2 distinct genotypes, 11 isolates belonged to genotype 2, and other 2 isolates belonged to genotype 3. Results indicated two genotypes of Class I Newcastle disease virus might widely exist in domestic poultry in China.
Animals
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Birds
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China
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epidemiology
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Genotype
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Humans
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Molecular Epidemiology
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methods
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Newcastle Disease
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epidemiology
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virology
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Newcastle disease virus
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classification
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genetics
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pathogenicity
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Phylogeny
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Reverse Transcriptase Polymerase Chain Reaction
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Viral Fusion Proteins
;
genetics
10.Study on self-consciousness of children with learning disabilities and related factors.
Juan HAN ; Han-Rong WU ; Yi-Zhen YU ; Sen-Bei YANG ; Yong-Mei HUANG
Biomedical and Environmental Sciences 2005;18(3):207-210
OBJECTIVETo study the self-consciousness of children with learning disabilities (LD) and to identify related factors.
METHODSFive hundred and sixty pupils graded from 1 to 6 in an elementary school were investigated. According to the pupil rating scale revised screening for learning disabilities (PRS), combined Raven's test (CRT) and achievement of main courses, 35 of 560 pupils were diagnosed as LD children. Thirty-five children were selected from the average children and 35 from advanced children in academic achievement equally matched in class, gender, and age with LD children as control groups. The three groups were tested by Piers-Harris children's self-concept scale. Basic information of each subject was collected by self-made questionnaire.
RESULTSCompared with the average and advanced children, LD children got significantly lower scores in self-concept scale. Based on logistic regression analysis, 3 factors were identified, including family income per month, single child and delivery model.
CONCLUSIONThe results suggest that self-consciousness of children with LD is lower than that of normal children.
Child ; Extraction, Obstetrical ; Humans ; Income ; Learning Disorders ; diagnosis ; Obstetrical Forceps ; Only Child ; Risk Factors ; Self Concept