1.Application of Seasonal Auto-regressive Integrated Moving Average Model in Forecasting the Incidence of Hand-foot-mouth Disease in Wuhan, China
PENG YING ; YU BIN ; WANG PENG ; KONG DE-GUANG ; CHEN BANG-HUA ; YANG XIAO-BING
Journal of Huazhong University of Science and Technology (Medical Sciences) 2017;37(6):842-848
Outbreaks of hand-foot-mouth disease (HFMD) have occurred many times and caused serious health burden in China since 2008.Application of modem information technology to prediction and early response can be helpful for efficient HFMD prevention and control.A seasonal auto-regressive integrated moving average (ARIMA) model for time series analysis was designed in this study.Eighty-four-month (from January 2009 to December 2015) retrospective data obtained from the Chinese Information System for Disease Prevention and Control were subjected to ARIMA modeling.The coefficient of determination (R2),normalized Bayesian Information Criterion (BIC) and Q-test P value were used to evaluate the goodness-of-fit of constructed models.Subsequently,the best-fitted ARIMA model was applied to predict the expected incidence of HFMD from January 2016 to December 2016.The best-fitted seasonal ARIMA model was identified as (1,0,1)(0,1,1)12,with the largest coefficient of determination (R2=0.743) and lowest normalized BIC (BIC=3.645) value.The residuals of the model also showed non-significant autocorrelations (PBox-Ljung (Q)=0.299).The predictions by the optimum ARIMA model adequately captured the pattern in the data and exhibited two peaks of activity over the forecast interval,including a major peak during April to June,and again a light peak for September to November.The ARIMA model proposed in this study can forecast HFMD incidence trend effectively,which could provide useful support for future HFMD prevention and control in the study area.Besides,further observations should be added continually into the modeling data set,and parameters of the models should be adjusted accordingly.
2.Establishment and application of high throughput screening model for hepatitis C virus NS3-4A protease inhibitors in vitro.
Li JIAN-RUI ; Wu YAN-BIN ; Si SHU-YI ; Chen HONG-SHAN ; Jiang JIAN-DONG ; Bang ZONG-GEN
Acta Academiae Medicinae Sinicae 2011;33(1):98-101
OBJECTIVETo establish fluorescence resonance energy transfer (FRET) assay method of detecting proteolytic activity of non-structural protein 3-4A (NS3-4A) serine protease of hepatitis C virus (HCV) for high throughput screening inhibitors against HCV in vitro.
METHODSHCV recombinant plasmid pMAL~c2/NS3-4A was transformed into the E.coli strain K12TB1. Maltose-binding-protein (MBP) NS3-4A fusion protein expression was induced by adding isopropyl-β-D-thiogalacto-pyranoside (IPTG) and purified by affinity chromatography. The proteolytic activity of MBP-NS3-4A protease was analyzed by FRET with the special protease substrate. The reaction system in this model was optimized, and the reliability of the model was evaluated.
RESULTSHigh throughput screening model for HCV NS3-4A protease inhibitors was established, and the best concentrations of enzyme and substrate were optimized. In the model, the Km value of protease was 4.74 μmol/L, Z factor was up to 0.80, and coefficient of variation (CV) was 1.91%. BILN 2061, one of the known HCV protease inhibitors, was measured with the Ki of 0.30 nmol/L.
CONCLUSIONThe assay model using FRET method for HCV NS3 4A serine protease is stable and reliable, and the model is suitable for high throughput screening for HCV NS3 4A protease inhibitors.
Antiviral Agents ; pharmacology ; Drug Evaluation, Preclinical ; Fluorescence Resonance Energy Transfer ; Hepacivirus ; enzymology ; High-Throughput Screening Assays ; methods ; Protease Inhibitors ; pharmacology ; Viral Nonstructural Proteins ; antagonists & inhibitors ; genetics
3.Investigation on the distribution of avian influenza virus in external environment and the level of H5N1 antibody in poultry-exposed population in Wuhan.
Ying WANG ; Wen-hua KONG ; Hong-hao ZHU ; Tong-yong LUO ; Xin-ming LIN ; Bin YU ; Bang-hua CHEN ; Quan HU ; Jin-song PENG
Chinese Journal of Preventive Medicine 2011;45(12):1082-1085
OBJECTIVETo survey the distribution of influenza A subtypes in external environment and investigate the infectious status of highly pathogenic avian influenza (H5N1) in poultry-exposed population in Wuhan.
METHODSSeventy-eight external environmental samples (water, cage surface and fecal samples) were collected from 3 habitats of wild migratory birds and 5 urban live-poultry markets in 2010. In 13 avian influenza monitoring points, 249 serum samples were collected from people living around habitats of wild migratory birds or working in live poultry markets. Real-time RT-PCR method was adopted to detect influenza A virus from external environmental samples; and multiple RT-PCR method and specific H3, H5, H7 and H9 primers were then applied to analyze the subtypes of the positive samples. The levels of H5N1 antibody in poultry-exposed population were tested by horse hemagglutination inhibition test and two avian influenza inactivated antigens: A/Hubei/1/10 and A/Anhui/1/05.
RESULTSOf the 50 external environmental samples collected from live poultry markets, 17 samples were determined to be influenza A virus positive (positive rate 34.0%), including specific subtypes as follows: 4 samples of H5 single-positive subtype, 3 samples of H9 single-positive subtype, 4 samples of H3 and H5 mixed-positive subtype, 2 samples of H3 and H9 mixed-positive subtype, 2 samples of H5 and H9 mixed-positive subtype, 2 samples of H3, H5 and H9 mixed-positive subtype, but no H7 positive subtype was found. The 28 external environmental samples collected from habitats of wild migratory birds were all influenza A virus negative. Considering different types of external environmental samples, the influenza A virus positive rates in water, cage surface and fecal samples were 37.5% (6/16), 16.7% (5/30) and 18.8% (6/32), respectively. There were total 100 samples of serum whose A/Hubei/1/10 antigen inhibiting titers ≥ 40, accounting for 40.2%; while 36 samples of serum (14.5%) whose A/Anhui/1/05 antigen inhibiting titers ≥ 40 were found. The difference had statistical significance (χ(2) = 41.433, P < 0.05). Among the 249 serum samples collected from poultry-exposed population, 5 samples were H5N1 antibody positive against A/Hubei/1/10 antigen (inhibition titer ≥ 160), which came from 4 different live poultry markets, however, no positive serum sample against A/Anhui/1/05 antigen was found.
CONCLUSIONMultiple subtypes of avian influenza virus simultaneously prevailed in Wuhan urban poultry markets. Moreover, results from the distribution of avian influenza virus in external environment were consistent with the level of H5N1 antibody in poultry-exposed population.
Animals ; Antibodies, Viral ; blood ; Birds ; virology ; China ; Environment ; Humans ; Influenza A Virus, H5N1 Subtype ; immunology ; Occupational Exposure ; Poultry ; virology
4.A cross-sectional study on the cases of hepatitis B reported in Wuhan, Hubei province in 2010.
Tong-yong LUO ; Bin YU ; Quan HU ; Jian CHEN ; Dun-jin KONG ; Hong DU ; Qiu-ling LI ; Bang-hua CHENG ; Dun-jin ZHOU
Chinese Journal of Epidemiology 2011;32(9):952-953
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5.Expression of Btk and NFκB in acute myeloid leukemia cells and its significance.
Shan-Dong TAO ; Yuan DENG ; Zheng-Mei HE ; Yue CHEN ; Zhi-Kui DENG ; Yuan-Yuan LI ; Jia-Bin ZHU ; Bang-He DING ; Liang YU
Journal of Experimental Hematology 2013;21(1):25-28
This study was purposed to investigate the expression of Btk and NFκB in acute myeloid leukemia (AML) cells and its significance. Bone marrow mononuclear cell specimens were taken from 14 AML patients who were in new diagnosis and complete remission respectively, the expressions of Btk and NFκB at mRNA and protein levels were detected by RT-PCR and Western blot, respectively. The results showed that Btk and NFκB expressed in all the samples at RNA and protein levels. At protein level, Btk and NFκB expressions were higher in the cells from newly diagnosed AML patients than that in the cells from patients in complete remission stage (P < 0.05). It is concluded that Btk and NFκB may play an important role in the development and progression of AML, they may be used as potential therapeutic targets of AML and used in predicting the prognosis.
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6.Early outcome of one-stage posterior transpedicular hemi-vertebra resection in the treatment of children with congenital scoliosis.
Yang YU ; Wen-Jun CHEN ; Yong QIU ; Bin WANG ; Bang-Ping QIAN ; Ze-Zhang ZHU ; Feng ZHU ; Xu SUN ; Wei-Wei MA
Chinese Journal of Surgery 2010;48(13):985-988
OBJECTIVETo evaluate the early outcomes of children with congenital scoliosis treated by one-stage transpedicular hemi-vertebra resection.
METHODSFrom July 2005 to June 2006, 27 consecutive cases of congenital scoliosis managed by one-stage transpedicular hemi-vertebra resection with instrumentation were investigated retrospectively. There were 11 girls and 16 boys, with a mean age of 5.5 years at surgery (range 1.3 - 10.0 years). Location of the hemi-vertebra was in the thoracic spine in 12 cases and in the lumbar spine in 15 cases. Radiographic evaluations were performed on the preoperative, postoperative, and latest follow-up standing posteroanterior and lateral radiographs.
RESULTSThe average operation time was 4 hours (range 3-6 hours), and the mean blood loss during operation was 750 ml (range 300 - 2200 ml). The mean fusion level was 2 to 7 segments, average 4.4 segments. The average follow-up period was 16 months (range 12 - 34 months). Mean Cobb angle of the total main curve was 40.0° before surgery, 12.6° after surgery, and 15.2° at latest follow-up. Mean Cobb angle of the segmental main curve was 35.6° before surgery, 11.6° after surgery, and 12.1° at latest follow-up. The trunk shift was improved from 16.5 mm before operation to that of 7.5 mm after the operation and 7.6 mm at the latest follow-up. Compensatory cranial curve improved from 19.4° before surgery to 8.9° after surgery, and compensatory caudal curve improved from 26.3° to 12.8°. The angle of segmental kyphosis was 26.4° before surgery and 14.6° after surgery in cases with thoracic hemivertebrae, and averaged 11.2° before surgery and 3.9° after surgery in cases with lumbar hemivertebrae. Peri-operative complications included two pedicle screws malpositioning and one case with pelvic tilt. There was no neurological complication.
CONCLUSIONOne-stage transpedicular hemi-vertebra resection with instrumentation has a good capability of correcting deformity on the frontal and sagittal planes, which is available in children with middle or lower thoracic or lumbar hemivertebrae.
Child ; Child, Preschool ; Female ; Follow-Up Studies ; Humans ; Infant ; Lumbar Vertebrae ; abnormalities ; surgery ; Male ; Retrospective Studies ; Scoliosis ; congenital ; surgery ; Thoracic Vertebrae ; abnormalities ; surgery ; Treatment Outcome
7.Telomerase expression in sebaceous carcinoma of the eyelid.
Bin LI ; Ning-dong LI ; Xiao-lin XU ; Bang-he ZHENG ; Xian-li SUN ; Liao-qing LI ; Chang-xi CHEN
Chinese Medical Journal 2004;117(3):445-448
BACKGROUNDIn humans telomerase is expressed in most cancers and immortal cell lines, and activation of telomerase may play important roles in tumorigenesis and immortalization. This study was to investigate the roles of telomerase activity (TA) and human telomerase RNA (hTR) in sebaceous carcinoma of the eyelid.
METHODSThe telomerase repeated amplification protocol (TRAP) was used to demonstrate telomerase activity in 12 cases of sebaceous carcinoma of the eyelid. In situ hybridization (ISH) was used to demonstrate the expression of hTR in 55 cases of paraffin-embedded sebaceous carcinoma of the eyelid, and the results were compared with the proliferative index determined by Mib-1 immuno-labeling, histological patterns and recurrence of the tumor.
RESULTSDifferent telomerase activity was shown in the 12 cases of sebaceous carcinoma of the eyelid. The positive expression of hTR was 85.5% (47/55) in tumor cells, but not in the adjacent tissues. The positive expression of hTR was correlated with the proliferative activity (as assessed by Mib-1 immunolabelling, r = 0.942, P < 0.001) and the differentiation of sebaceous carcinoma of the eyelid (chi(2) = 17.621, P < 0.001), but not significantly related to tumor recurrence. The level of hTR expression increased with the decrease of differentiation of sebaceous carcinoma of the eyelid.
CONCLUSIONSThe results suggest that the up-regulation of telomerase expression plays some roles in tarsal gland carcinogenesis, and the expression of hTR is a useful marker for malignant degree of sebaceous carcinoma of the eyelid.
Biomarkers, Tumor ; analysis ; Eyelid Neoplasms ; enzymology ; pathology ; Humans ; In Situ Hybridization ; Neoplasm Recurrence, Local ; enzymology ; RNA ; analysis ; Sebaceous Gland Neoplasms ; enzymology ; pathology ; Telomerase ; analysis
8.Analysis of cancer incidence and mortality in Henan province, 2009.
Jian-gong ZHANG ; Shu-zheng LIU ; Qiong CHEN ; Pei-liang QUAN ; Jian-bang LU ; Xi-bin SUN
Chinese Journal of Preventive Medicine 2013;47(7):597-602
OBJECTIVETo analyze the cancer incidence and mortality of Henan province in 2009.
METHODSOn basis of the criteria of data quality from the National Central Cancer Registry (NCCR), data from 6 registries in Henan province were evaluated, covering 6 061 564 people, accounting for 6.45% of the total population in Henan in 2009. There were 3 104 991 people of males, and 2 956 573 people of females. The incidence, mortality, 10 most common cancers, constitution and cumulative rate (0-74 years old) were then calculated. The age-standardized rate was calculated and adjusted by the Chinese standard population in 1982 as well as the Segi's world standard population.
RESULTSThere were 12 091 new diagnosed cancer and 8040 death cases registered in Henan province in 2009. The rate of pathological diagnosis was 68.2% (8246/12 901) and only 1.75% (2116/12 901) had death certificates. The ratio of mortality and incidence was 0.66 (8040/12 091). The incidence rate was 199.47/100 000 (12 091/6 061 564) in total, and it was 216.36/100 000(6718/3 104 991) in males and 181.73/100 000(5373/2 956 573) among females. The standardized incidence by Chinese population was 126.50/100 000 and it was 166.08/100 000 by world's population. The cumulative rate was 19.95% between 0 and 74 years old. The incidence was the highest in Linzhou city, whose standardized incidence was 156.87/100 000 by Chinese population and the incidence was the lowest in Shenqiu city, whose standardized incidence was 104.82/100 000 by Chinese population. The morphology verified cases accounted for 68.2% (8246/12 091), death certification cases only accounted for 1.75% (2116/12 091), and mortality to incidence ratio was 0.66 (8040/12 091). The crude incidence in cancer registration areas of Henan province was 199.47/10 000 (12 091/6 061 564), 216.36/10 000(6718/3 104 991) for males, 181.73/10 000 (5373/2 956 573) for females, age-standardized incidence rates by Chinese standard population and by world standard population were 126.50/10 000 and 166.08/10 000 with cumulative incidence rate (0-74 age years old) of 19.95%. The crude mortality in cancer registration areas of Henan province was 132.64/100 000 (8040/6 061 564), separately 160.58/100 000 (4986/3 104 991) for males and 103.30/10 000 (3054/2 956 573) for females. The age-standardized mortality rates by Chinese standard population and by world's standard population were 78.41/10 000 and 107.49/10 000. The cumulative mortality rate (0-74 age years old) was 12.18%. The mortality rate was the highest in Linzhou city, whose standardized rate was 93.35/100 000 by Chinese population, and the lowest mortality rate was in Yuzhou city, whose standardized rate was 67.95/100 000. The most common cancers were lung cancer, esophageal cancer, gastric cancer, liver cancer, breast cancer, rectum cancer, brain nervous system cancer, colon cancer, cervical cancer and uterus cancer, all of which accounted for 82.23% (9943/12 091) of the registered cancers.Lung cancer, esophageal cancer, gastric cancer, liver cancer, breast cancer, rectum cancer, brain nervous system cancer, pancreas cancer, colon cancer and gallbladder carcinoma were the major causes for the death, accounting for 86.30% (6938/8040) of all cancer deaths.
CONCLUSIONBoth incidence and mortality of cancer in Henan province were lower than the level in China, prevention and control should be implemented based on practical situation.
Adolescent ; Adult ; Age Distribution ; Aged ; Aged, 80 and over ; Child ; Child, Preschool ; China ; epidemiology ; Female ; Humans ; Incidence ; Infant ; Infant, Newborn ; Male ; Middle Aged ; Neoplasms ; epidemiology ; mortality ; Registries ; Sex Distribution ; Survival Rate ; Young Adult
9.Misplacement patterns of the pedicle screws in surgical correction of patients with adolescent idiopathic scoliosis.
Wen-jun CHEN ; Yong QIU ; Bin WANG ; Yang YU ; Bang-ping QIAN ; Ze-zhang ZHU ; Feng ZHU ; Xu SUN ; Wei-wei MA
Chinese Journal of Surgery 2009;47(22):1725-1727
OBJECTIVETo evaluate and analyze the misplacement patterns of the pedicle screws in surgical correction of patients with adolescent idiopathic scoliosis.
METHODSFor this study, 70 consecutive cases of patients with adolescent idiopathic scoliosis treated by posterior instrumented spinal fusion with pedicle screws were investigated from July 2008 to September 2008. Postoperative CT scans were performed in all cases. The patients included 58 girls and 12 boys, with a mean age of 14.5 +/- 2.7 years at surgery (range 12 - 19 years). Pedicle screws were inserted using anatomic landmark with free hand technique. A number of parameters were measured using PacsClient software (PACS) on workstation, which included distances of the penetration of medial, lateral pedicle cortex and anterior vertebral cortex. The distance between edge of aorta and tip of screw should be measured if left pedicle screw penetrated lateral pedicle cortex or anterior vertebral cortex. Misplacement screws with > 2 mm of either pedicular cortex perforation and grievous screws with >4 mm of medial pedicle perforation or contour of aorta were defined. The influencing factors for misplacement screws were analyzed.
RESULTSA total of 1030 pedicle screws were inserted, 773 in thoracic pedicle and 257 in lumbar pedicle. There were 108 (10.5%) misplacement screws, 35 of which penetrated lateral pedicle cortex, 56 of which penetrated medial pedicle cortex, 33 of which penetrated vertebral anterior cortex. Misplacement screw rate of apical vertebra, 5 segments above apical vertebra (AV-5s) and 4 segments below apical vertebra (AV + 4s) were higher than other levels. Most of grievous screws were placed in apical vertebra region.
CONCLUSIONSThe risk factors for misplacement screws included Cobb angle > 90 degrees and vertebrae rotation extent up to III-IV. Care should be exercised during pedicle screw instrumentation in the apical region of the main thoracic curve, AV-5s region and AV + 4s region.
Adolescent ; Bone Screws ; Child ; Female ; Humans ; Male ; Risk Factors ; Scoliosis ; surgery ; Spinal Fusion ; instrumentation ; methods ; Treatment Outcome ; Young Adult
10.Serum sCD44v6 and sE-cadherin levels in patients with esophageal squamous cell carcinoma.
Ying HE ; Jun ZHANG ; Shu-kui WANG ; Wen-bin HUANG ; Xin-guo CHEN ; Bang-shun HE ; You-cai ZHAO ; Jin-song WANG
Journal of Zhejiang University. Medical sciences 2012;41(3):305-309
OBJECTIVETo investigate the serum levels of sCD44v6 and sE-cadherin (sE-cad) in patients with esophageal squamous cell carcinoma.
METHODSThe serum samples were collected from 65 cases of esophageal squamous cell carcinoma, 32 cases of erosive esophagitis and 35 healthy subjects. Serum sCD44v6 and sE-cad levels were measured by enzyme linked immunosorbent assay (ELISA).
RESULTSThe mean levels of serum sCD44v6 and sE-cad in esophageal squamous cell carcinoma patients were significantly higher than those of erosive esophagitis patients and normal controls (both P<0.05). There was no significant difference in serum sCD44v6 and sE-cad levels between erosive esophagitis patients normal controls (P=0.566 and P=0.708, respectively). Serum sCD44v6 and sE-cad levels of esophageal cancer patients were not correlated with their clinicopathological features. Serum sCD44v6 level is not correlated with sE-cad level in squamous cell carcinoma patients(P=0.651).
CONCLUSIONSerum sCD44v6 and sE-cad might be a potential marker for screening of esophageal squamous cell carcinoma.
Adult ; Aged ; Aged, 80 and over ; Cadherins ; blood ; Carcinoma, Squamous Cell ; blood ; pathology ; Case-Control Studies ; Esophageal Neoplasms ; blood ; pathology ; Female ; Humans ; Hyaluronan Receptors ; blood ; Male ; Middle Aged