No abstract available.
Abscess* ; Bacteria, Aerobic* ; Quinolones* ; Virulence*

BACKGROUND: Matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) has been used for the identification of bacteria worldwide. To our knowledge, the evaluation of MALDI-TOF MS for the identification of bacteria in Korea has not been studied. In this paper we compared the identification results of aerobic bacteria using MALDI-TOF MS to those results using conventional biochemical methods. METHODS: We evaluated the performance of a MALDI-TOF MS system (Bruker Daltonics, Leipzig, Germany) on consecutive aerobic isolates collected from January to February of 2011 which were identified using conventional methods (biochemical testing and commercial identification kits). Either directly smearing onto the target plate or protein extraction methods were additionally used if no reliable or discordant results were obtained. RESULTS: Among 523 isolates tested, 506 (97%) isolates had valid scores (> or =2.0), 11 (2%) isolates gave intermediate scores (1.7< or = score <2.0), and 6 (1%) isolates yielded no reliable identification (score <1.7). Of the 506 valid results (score > or =2.0) by MALDI-TOF MS, the identification matched at the species level in 486 (96%) isloates, matched at the genus level in 17 (3%) isloates, and was discordant at the genus and species levels in 3 (1%) isloates. CONCLUSION: The overall matching rate at the species level of MALDI-TOF MS was very high. When MALDI-TOF MS did not yield reliable results by direct smear, additional direct smears or protein extraction methods could be used to obtain better results. Our results showed that MALDI-TOF MS is a very useful method for the identification of aerobic bacteria isolated in clinical microbiology laboratories.
Bacteria ; Bacteria, Aerobic ; Korea ; Mass Spectrometry

Study on 287 gallstone patients who had surgical gallstone operation at Thai Binh general hospital during two years from January 2003 to December 2004. The results showed that: among 287 experimental samples of biliary fluid tested, there were 282 samples with bacteria (98.3%). The bacteria belongs to intestinal family were the most common, especially E.coli with the rate of 50.3%, streptococcus type D: 18.6%. These bacteria were sensitive to antibiotics such as cephalosporin 3rd generation, ciprofloxacin, gentamycine, amikacine; less sensitive to ampicilline, cloramfenicol, and cephalotin. P.aeruginosa was sensitive to ciprofloxacin, gentamycine, amikacine.
Gallstones ; Bacteria, Aerobic ; Anti-Bacterial Agents

OBJECTIVEIn this study, we examined the biodegradation of Dichloroethylene (DCE) by two strains of aerobic bacteria.

METHODSUsing batch experiments, we measured the biodegradation rates of DCE and the residual concentrations of DCE for each bacterial strain. The varying trends in biodegradation rates with different initial concentrations of DCE were fitted to kinetic models.

RESULTSThe biodegradation kinetics of DCE by the strain DT-X, which uses toluene as co-metabolic substrate, fitted the Monod model (corresponding parameters: v(max)=0.0075 h(-1), K(s)=2.12 mg/L). The biodegradation kinetics of DCE by the strain DT-M, which uses 1,1-Dichloroethylene as single substrate, fitted the Haldane model (parameters: v(max) =0.0046 h(-1), K(s)=4.25 mg/L, K(i)=8.47 mg/L).

CONCLUSIONThe substrate removal rate constant of 1,1-Dichloroethylene of the co-metabolic strain DT-X was much higher than that of strain DT-M. The substrate removal rates obtained from both bacterial strains in this study were higher than those reported in similar studies.

Present study deals with the straight impact of hypobaric hypoxia on the quantity and composition of some predominant fecal microflora and its functional aspects. For that, isolated fecal contents of rat were exposed to two different simulated air pressures (70 kPa and 40 kPa) for different time durations (1, 3, and 5 h) and the bacterial community composition was compared with normobaric groups (101.3 kPa). It was found that the total anaerobes, Escherichia coli, Enterbacters spp., Bifidobacterium spp., Clostridium spp. were increased whereas total aerobes were decreased at both hypobaric treatments. The increased number of amplicon was detected in the pressure-treated groups than the control that clearly mentioned the disruption of microbiota structure at different simulated hypobaric-hypoxia. The amylase, protease, tannase, β-glucuronidase, and alkaline phosphatase activities were increased at these atmospheric pressures. Thus, the present investigation demonstrates that the hypobaric hypoxia is an important environmental factor which can strongly modulate the composition of intestinal flora as well as microflora-derived functional aspects.
Animals ; Atmospheric Pressure ; Bacteria, Aerobic ; Feces ; Hypoxia ; Microbiota ; Rats

Since the first clinical observation by Kelly and MacCallum, gas-forming infection of the urinary tract has been extensively studied. It is characterized by gas production within the urinary tract. The gas may often pass outside the urinary tract. Patients with this disorder invariably have uncontrolled diabetes mellitus and pos sibly associated obstructive uropathy. It is usually caused by aerobic bacteria, most commonly Escherichia coli. In the literature, the majority of cases were emphy sematous pyelonephritis alone or emphysematous cystitis separately. Bilateral renal involvement associated with emphysematous cystitis is very rarely seen and no case was reported yet in Korea. We report a case of bilateral emphysematous pye lonephritis and emphysematous cystitis which occured in 48-year-old diabetic patient simultaneously. It was caused by E. coli. The patient was cured by medical management alone.
Bacteria, Aerobic ; Cystitis* ; Diabetes Mellitus ; Escherichia coli ; Humans ; Korea ; Middle Aged ; Pyelonephritis* ; Urinary Tract

The internal-loop granular sludge bed nitrifying reactor is a new type of aerobic nitrifying equipment and has taken on a good potential for nitrification. The critical aerating flux for liquid loop and critical aerating flux for fluidization of granular sludge are two important parameters for its operation. The relationship between liquid superficial velocity in riser (U1r) and aerating flux(Ugr) was studied, the model parameters were measured by experiment, and the relational expression was established. According to the model, the critical aerating flux for liquid loop and the critical aerating flux for fluidization of granular sludge were calculated as 1.017cm/min and 2.662cm/min, respectively. The experimental data from reactor operation showed that the two calculated critical aerating fluxes near the practical values. So they could be used to direct the design and operating optimization for the internal-loop granular sludge bed nitrifying reactor.
Bacteria, Aerobic ; metabolism ; Bioreactors ; Nitrites ; metabolism ; Sewage ; chemistry ; microbiology ; Waste Disposal, Fluid ; methods

PURPOSE: This study was done to examine how medication contamination in a single-dose glass ampule is affected by minute glass flakes generated in different methods of cutting the ampule. METHOD: Sixty medicationcontaining glass ampules were randomly assigned to two groups. The number of glass flakes, resulting from two different cutting methods (with cotton and without cotton), were counted under the microscope. Contamination was evaluated by extracted the medication with a syringe and culturing it in E. coli, coliform, and aerobic bacteria culture media. Result: Fewer glass flakes were found in the ampules when the ampule was cut with cotton. The use of cotton, however, did not significantly change the degree of drug contamination. CONCLUSION: Although minute glass flakes generated in the ampule cutting operation did not significantly contaminate the medication and the use of cotton decreased the number of glass flakes in the ampules, glass flakes injected into the blood and tissues of the patient remain a risk factor. Therefore, pre-filled syringes or syringes with filters would be alternative methods and safeguards against the possible injection of glass flakes generated while cutting the ampule.
Bacteria, Aerobic ; Culture Media ; Drug Contamination ; Glass ; Humans ; Risk Factors ; Syringes

BACKGROUND: Continuous monitoring systems have allowed determination of the time-to-positivity (TTP). We evaluated the clinical relevance of TTP in the BACTEC9240 system (Becton-Dickinson, USA). METHODS: A total of 2,354 vials of positive blood cultures were evaluated over 2 months. TTP was monitored from each of BACTEC Plus Aerobic/F (BD) or Pediatric Plus/F and Lytic Anaerobic/F bottles, and the differential time-to-positivity (DTP) for blood samples drawn simultaneously via catheter and a peripheral site was determined. RESULTS: The average TTP of the positive vials was 17.4 hr, and 79.9% and 95.2% of the vials showed positivity within 24 and 48 hr, respectively. While the average TTP values for Aeromonas hydrophila, Bacillus cereus, Acinetobacter baumannii, and Streptococcus pneumoniae were less than 10 hr, those for Candida spp., anaerobes, Propionibacterium acnes, Corynebacterium spp, Bacillus spp. other than cereus, and coagulase-negative staphylococci were 35.3, 27.0, 56.8, 45.8, 23.0, and 26.3 hr, respectively. The negative predictive values of TTP over 24 hr to predict Staphylococcus aureus among staphylococci and S. pneumoniae among alpha-hemolytic streptococci were 76.7% and 100%, respectively. Enterobacteriaceae and Enterococcus faecalis showed shorter TTP in anaerobic vials than in aerobic vials. DTP of more than 2 hr was observed for 27.8%, 72.2%, and 45.5% of S. aureus, S. epidermidis, and Candida spp. CONCLUSIONS: TTP can be used to discriminate pathogens and contaminants. The shorter TTP in anaerobic vials of certain Enterobacteriaceae and Enterococcus spp. would facilitate further identification. DTP is useful for diagnosing catheter-related bloodstream infection by S. aureus, S. epidermidis, and Candida spp.
Bacteremia/*diagnosis ; Bacteria, Aerobic/isolation &purification ; Bacteria, Anaerobic/isolation &purification ; Bacteriological Techniques/instrumentation/methods ; Humans ; Reagent Kits, Diagnostic ; Time Factors

BACKGROUND AND OBJECTIVES: Microbiologic data in chronic sinusitis with nasal polyps, which is the foundation of proper antibiotic treatment, is insufficient due to problems with sampling and culture technique. Therefore, the objective of this study is to identify the causative agents in chronic sinusitis with nasal polyps based on culture results in adults and children and the relationship between the results of the middle meatus and maxillary sinus. Materials and Method: Samples were obtained with middle meatus swabs and endoscopically guided maxillary sinus aspirations and then transferred to a microbiology laboratory using different media for aerobic and anaerobic cultures. RESULTS: Eighty one samples were studied. Sixty six from the middle meatus and sixty four from the maxillary sinus bacterial isolates were recovered. The most frequently isolated aerobic organisms were the Staphylococcus, Haemophilus influenza and Streptococcus while those of the anaerobic organisms in adults were the Prevotella and Peptostreptococcus. No anaerobic microorganisms were isolated in the children. Concordance rates of aerobic bacteria were 75.4% among adults and 90.0% among children. That of anaerobic bacteria was 83.6% among adults and 100% among children between the middle meatal swab and the maxillary sinus aspiration. CONCLUSION: Authors recommend amoxacillin/clavulanate, cephalosporins and macrolide as the first-line medical treatment. In cases where there are no improvement of symptoms, cultures should be taken from the middle meatus, followed by appropriate selection of second-line antibiotics according to the sensitivity test results.
Adult ; Anti-Bacterial Agents ; Aspirations (Psychology) ; Bacteria ; Bacteria, Aerobic ; Bacteria, Anaerobic ; Cephalosporins ; Child ; Culture Techniques ; Haemophilus ; Humans ; Influenza, Human ; Maxillary Sinus ; Nasal Polyps* ; Peptostreptococcus ; Prevotella ; Sinusitis* ; Staphylococcus ; Streptococcus