1.Bloodstream infections with O16-ST131 and O25b-ST131: molecular epidemiology, phylogenetic analysis and antimicrobial resistance.
Yiming ZHONG ; Xiaohe ZHANG ; Wenen LIU ; Fang YANG ; Qun YAN ; Qingxia LIU ; Yanming LI ; Hongling LI ; Mingxiang ZOU
Journal of Southern Medical University 2018;38(12):1521-1526
OBJECTIVE:
To investigate the phylogenetics and prevalence of bloodstream infections with ST131, the antimicrobial resistance profiles of the pathogens, and the clinical features.
METHODS:
Non-duplicate isolates were collected from 144 patients with bloodstream infections in our hospital between January and December, 2016.The phylogenetic groups of the isolates were analyzed using multiplex PCR, and O serotyping of ST131 strains was performed by allele-specific PCR.The clinical characteristics of the 144 patients were analyzed to define the differences in the clinical features between patients with ST131 infection and those with non-ST131 infection.Antibiotic susceptibility of the isolates was determined using the Vitek 2 compact system.
RESULTS:
The phylogenetic group analysis showed a domination by group B2 (41.0%[59/144]), followed by group F, group B1 and group E, which accounted for 16.7%(24/144), 13.9%(20/144), and 13.2% (19/144), respectively.Nine strains (6.3%) of were identified to be ST131 strains, among which 8 were O25b-B2-ST131 strains and 1 was O16-B2-ST131 strain.Of the 9 cases of ST131 infection, 7(77.8%) were found to occur in a nosocomial setting.The demographic characteristics and clinical features of the ST131-infected patients were similar to those of non-ST131-infected patients.ST131 strains were sensitive to piperacillin/tazobactam, imipenem, ertapenem, and amikacin, but showed high resistance rates to cefazolin, ceftriaxone, ciprofloxacin, levofloxacin, gentamicin, and trimethoprim/ sulfamethoxazole (all over 50%).The positivity rate of ESBLs in the ST131 strains was 77.8%, and the multidrug resistance rate reached 88.9%, which was higher than that of non-ST131 isolates, but the difference was not statistically significant.
CONCLUSIONS
The most common phylogenetic groups of isolates from patients with bloodstream infections are group B2 and F, and the positivity rate of ST131 is low.We for the first time detected O16-ST131 in patients with blood-borne infections in China.The clinical features of ST131-infected patients are similar to those of non-ST131-infected patients.The positivity rate of ESBLs and the multidrug resistance rate are high in ST131 strains, which may raise concerns in the future.
Anti-Bacterial Agents
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therapeutic use
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Bacteremia
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drug therapy
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epidemiology
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microbiology
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China
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Drug Resistance, Bacterial
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Escherichia coli
;
classification
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drug effects
;
genetics
;
Escherichia coli Infections
;
drug therapy
;
epidemiology
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microbiology
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Genotype
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Humans
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Microbial Sensitivity Tests
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Molecular Epidemiology
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Phylogeny
;
Species Specificity
2.Clinical and Molecular Epidemiology of Community-Onset Bacteremia Caused by Extended-Spectrum beta-Lactamase-Producing Escherichia coli over a 6-Year Period.
Cheol In KANG ; Min Kyeong CHA ; So Hyun KIM ; Kwan Soo KO ; Yu Mi WI ; Doo Ryeon CHUNG ; Kyong Ran PECK ; Nam Yong LEE ; Jae Hoon SONG
Journal of Korean Medical Science 2013;28(7):998-1004
Although extended-spectrum beta-lactamase-producing Escherichia coli (ESBL-EC) has emerged as a significant community-acquired pathogen, there is little epidemiological information regarding community-onset bacteremia due to ESBL-EC. A retrospective observational study from 2006 through 2011 was performed to evaluate the epidemiology of community-onset bacteremia caused by ESBL-EC. In a six-year period, the proportion of ESBL-EC responsible for causing community-onset bacteremia had increased significantly, from 3.6% in 2006 to 14.3%, in 2011. Of the 97 clinically evaluable cases with ESBL-EC bacteremia, 32 (33.0%) were further classified as healthcare-associated infections. The most common site of infection was urinary tract infection (n=35, 36.1%), followed by biliary tract infections (n=29, 29.9%). Of the 103 ESBL-EC isolates, 43 (41.7%) produced CTX-M-14 and 36 (35.0%) produced CTX-M-15. In the multilocus sequence typing (MLST) analysis of 76 isolates with CTX-M-14 or -15 type ESBLs, the most prevalent sequence type (ST) was ST131 (n=15, 19.7%), followed by ST405 (n=12, 15.8%) and ST648 (n=8, 10.5%). No significant differences in clinical features were found in the ST131 group versus the other group. These findings suggest that epidemic ESBL-EC clones such as CTX-M-14 or -15 type ESBLs and ST131 have disseminated in community-onset infections, even in bloodstream infections, which are the most serious type of infection.
Aging
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Bacteremia/drug therapy/*epidemiology
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Biliary Tract Diseases/epidemiology/microbiology
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Cephalosporin Resistance/genetics
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Cephalosporins/therapeutic use
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Community-Acquired Infections/*epidemiology/microbiology
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Escherichia coli/isolation & purification/metabolism
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Escherichia coli Infections/drug therapy/*epidemiology
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Female
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Humans
;
Male
;
Microbial Sensitivity Tests
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Molecular Epidemiology
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Multilocus Sequence Typing
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Prevalence
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Retrospective Studies
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Urinary Tract Infections/epidemiology/microbiology
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beta-Lactamases/*metabolism
3.Bloodstream Infections and Clinical Significance of Healthcare-associated Bacteremia: A Multicenter Surveillance Study in Korean Hospitals.
Jun Seong SON ; Jae Hoon SONG ; Kwan Soo KO ; Joon Sup YEOM ; Hyun Kyun KI ; Shin Woo KIM ; Hyun Ha CHANG ; Seong Yeol RYU ; Yeon Sook KIM ; Sook In JUNG ; Sang Yop SHIN ; Hee Bok OH ; Yeong Seon LEE ; Doo Ryeon CHUNG ; Nam Yong LEE ; Kyong Ran PECK
Journal of Korean Medical Science 2010;25(7):992-998
Recent changes in healthcare systems have changed the epidemiologic paradigms in many infectious fields including bloodstream infection (BSI). We compared clinical characteristics of community-acquired (CA), hospital-acquired (HA), and healthcare-associated (HCA) BSI. We performed a prospective nationwide multicenter surveillance study from 9 university hospitals in Korea. Total 1,605 blood isolates were collected from 2006 to 2007, and 1,144 isolates were considered true pathogens. HA-BSI accounted for 48.8%, CA-BSI for 33.2%, and HCA-BSI for 18.0%. HA-BSI and HCA-BSI were more likely to have severe comorbidities. Escherichia coli was the most common isolate in CA-BSI (47.1%) and HCA-BSI (27.2%). In contrast, Staphylococcus aureus (15.2%), coagulase-negative Staphylococcus (15.1%) were the common isolates in HA-BSI. The rate of appropriate empiric antimicrobial therapy was the highest in CA-BSI (89.0%) followed by HCA-BSI (76.4%), and HA-BSI (75.0%). The 30-day mortality rate was the highest in HA-BSI (23.0%) followed by HCA-BSI (18.4%), and CA-BSI (10.2%). High Pitt score and inappropriate empirical antibiotic therapy were the independent risk factors for mortality by multivariate analysis. In conclusion, the present data suggest that clinical features, outcome, and microbiologic features of causative pathogens vary by origin of BSI. Especially, HCA-BSI shows unique clinical characteristics, which should be considered a distinct category for more appropriate antibiotic treatment.
Adult
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Aged
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Anti-Bacterial Agents/therapeutic use
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Bacteremia/drug therapy/*epidemiology/microbiology/mortality
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Community-Acquired Infections/drug therapy/*epidemiology/microbiology/mortality
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Cross Infection/drug therapy/*epidemiology/microbiology/mortality
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Humans
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Korea/epidemiology
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Male
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Middle Aged
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Prospective Studies
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Risk Factors
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Treatment Outcome
;
Young Adult
4.Prevalence and Clinical Impact of Heterogeneous Vancomycin-Intermediate Staphylococcus aureus Isolated From Hospitalized Patients.
Young Rae KOH ; Kye Hyung KIM ; Chulhun L CHANG ; Jongyoun YI
Annals of Laboratory Medicine 2016;36(3):235-243
BACKGROUND: We estimated the prevalence and clinical impact of heterogeneous vancomycin-intermediate Staphylococcus aureus (hVISA). The concordance between macromethod and glycopeptide resistance detection (GRD) E tests was determined. In addition, predictors of clinical outcomes in hospitalized patients with S. aureus bacteremia (SAB) or pneumonia (SAP) were evaluated. METHODS: We obtained 229 consecutive S. aureus isolates from all hospitalized patients at two university hospitals located in Busan and Yangsan, Korea. Standard, macromethod, and GRD E tests were performed. Additionally, we reviewed the medical records of all patients. Among the 229 patients, predictors of clinical outcomes were analyzed for 107 patients with SAB and 39 with SAP. RESULTS: Among the 229 isolates, 34.5% of S. aureus isolates and 50.7% of methicillin-resistant S. aureus isolates exhibited the hVISA phenotype based on the macromethod E test. hVISA was nearly associated with treatment failure in patients with SAB (P=0.054) and was significantly associated with treatment failure in patients with SAP (P=0.014). However, hVISA was not associated with 30-day mortality in patients with SAB or SAP. The concordance between the macromethod and GRD E tests was 84.2%. CONCLUSIONS: hVISA is quite common in the southeastern part of Korea. hVISA is associated with treatment failure in patients with SAP.
Aged
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Anti-Bacterial Agents/*pharmacology/therapeutic use
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Bacteremia/drug therapy/epidemiology/microbiology
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Drug Resistance, Bacterial/*drug effects
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Female
;
Hospital Mortality
;
Hospitalization
;
Humans
;
Male
;
Methicillin-Resistant Staphylococcus aureus/drug effects/isolation & purification
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Microbial Sensitivity Tests
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Middle Aged
;
Phenotype
;
Pneumonia/drug therapy/epidemiology/microbiology
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Prevalence
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Republic of Korea/epidemiology
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Staphylococcus aureus/*drug effects/isolation & purification
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Teicoplanin/pharmacology
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Vancomycin/pharmacology/*therapeutic use
5.Pseudomonas aeruginosa Bacteremia in Children Over Ten Consecutive Years: Analysis of Clinical Characteristics, Risk Factors of Multi-drug Resistance and Clinical Outcomes.
Mi Ae YANG ; Jina LEE ; Eun Hwa CHOI ; Hoan Jong LEE
Journal of Korean Medical Science 2011;26(5):612-618
This study aimed to evaluate the clinical profiles, antibiotic susceptibility, risk factors of multi-drug resistance (MDR) and outcomes of P. aeruginosa bacteremia in children by retrospective methods at a tertiary teaching children's hospital in Seoul, Korea during 2000-2009. A total of 62 episodes were evaluated and 59 patients (95.2%) had underlying diseases. Multivariate analysis demonstrated that an intensive care unit (ICU) stay within the previous one month was the only independent risk factor for MDR P. aeruginosa bacteremia (odds ratio [OR], 6.8; 95% confidence interval [CI], 1.3-35.8, P = 0.023). The overall fatality rate associated with P. aeruginosa bacteremia was 14.5% (9 of 62). The fatality rate in patients with MDR P. aeruginosa was 57.1%, compared with 9.1% in non-MDR patients (OR 13.3; 95% CI 2.3-77.2, P = 0.006). However, the presence of respiratory difficulty was the only independent risk factor for overall fatality associated with P. aeruginosa bacteremia according to multivariate analysis (OR 51.0; 95% CI 7.0-369.0, P < 0.001). A previous ICU stay and presentation with respiratory difficulty were associated with acquisition of MDR P. aeruginosa and a higher fatality rate, respectively. Future efforts should focus on the prevention and treatment of P. aeruginosa bacteremia in high-risk children.
Adolescent
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Bacteremia/*drug therapy/*epidemiology/microbiology
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Child
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Child, Preschool
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*Drug Resistance, Multiple, Bacterial
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Female
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Hospitals, Teaching
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Humans
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Infant
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Infant, Newborn
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Intensive Care Units, Pediatric
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Male
;
Microbial Sensitivity Tests
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Pseudomonas Infections/*drug therapy/*epidemiology/microbiology
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Pseudomonas aeruginosa/*drug effects
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Republic of Korea/epidemiology
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Retrospective Studies
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Risk Factors
;
Treatment Outcome
6.Risk factors and outcomes of imipenem-resistant Acinetobacter bloodstream infection in North-Eastern Malaysia.
Zakuan Zainy DERIS ; Mohd Nazri SHAFEI ; Azian HARUN
Asian Pacific Journal of Tropical Biomedicine 2011;1(4):313-315
OBJECTIVETo determine the risk factors and outcomes of imipenem-resistant Acinetobacter baumannii (IRAB) bloodstream infection (BSI) cases, since there is very little publication on Acinetobacter baumannii infections from Malaysia.
METHODSA cross sectional study of 41 cases (73.2%) of imipenem-sensitive Acinetobacter baumanii (ISAB) and 15 cases (26.8%) of IRAB was conducted in a teaching hospital which was located at North-Eastern state of Malaysia.
RESULTSThere was no independent risk factor for IRAB BSI identified but IRAB BSI was significantly associated with longer bacteraemic days [OR 1.23 (95% CI 1.01, 1.50)]. Although prior use of carbepenems and cephalosporin were higher among IRAB than ISAB group, statistically they were not significant. There was no significant difference in term of outcomes between the two groups.
CONCLUSIONSAlthough statistically not significant, this analysis compliments previous publication highlighting the importance of appropriate empiric antibiotic usage in hospital especially carbepenems and need further evaluation with bigger subjects.
Acinetobacter Infections ; drug therapy ; epidemiology ; microbiology ; Acinetobacter baumannii ; drug effects ; isolation & purification ; Adult ; Aged ; Aged, 80 and over ; Anti-Bacterial Agents ; pharmacology ; therapeutic use ; Bacteremia ; drug therapy ; epidemiology ; microbiology ; Case-Control Studies ; Cross-Sectional Studies ; Female ; Hospitals, Teaching ; Humans ; Imipenem ; pharmacology ; therapeutic use ; Malaysia ; epidemiology ; Male ; Middle Aged ; Risk Factors ; Treatment Outcome ; Young Adult ; beta-Lactam Resistance
7.Risk Factors for Mortality in Patients with Serratia marcescens Bacteremia.
Sun Bean KIM ; Yong Duk JEON ; Jung Ho KIM ; Jae Kyoung KIM ; Hea Won ANN ; Heun CHOI ; Min Hyung KIM ; Je Eun SONG ; Jin Young AHN ; Su Jin JEONG ; Nam Su KU ; Sang Hoon HAN ; Jun Yong CHOI ; Young Goo SONG ; June Myung KIM
Yonsei Medical Journal 2015;56(2):348-354
PURPOSE: Over the last 30 years, Serratia marcescens (S. marcescens) has emerged as an important pathogen, and a common cause of nosocomial infections. The aim of this study was to identify risk factors associated with mortality in patients with S. marcescens bacteremia. MATERIALS AND METHODS: We performed a retrospective cohort study of 98 patients who had one or more blood cultures positive for S. marcescens between January 2006 and December 2012 in a tertiary care hospital in Seoul, South Korea. Multiple risk factors were compared with association with 28-day all-cause mortality. RESULTS: The 28-day mortality was 22.4% (22/98 episodes). In a univariate analysis, the onset of bacteremia during the intensive care unit stay (p=0.020), serum albumin level (p=0.011), serum C-reactive protein level (p=0.041), presence of indwelling urinary catheter (p=0.023), and Sequential Oran Failure Assessment (SOFA) score at the onset of bacteremia (p<0.001) were significantly different between patients in the fatal and non-fatal groups. In a multivariate analysis, lower serum albumin level and an elevated SOFA score were independently associated with 28-day mortality [adjusted odds ratio (OR) 0.206, 95% confidential interval (CI) 0.044-0.960, p=0.040, and adjusted OR 1.474, 95% CI 1.200-1.810, p<0.001, respectively]. CONCLUSION: Lower serum albumin level and an elevated SOFA score were significantly associated with adverse outcomes in patients with S. marcescens bacteremia.
Adult
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Aged
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Aged, 80 and over
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Anti-Bacterial Agents/therapeutic use
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Bacteremia/drug therapy/microbiology/*mortality
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Cross Infection/mortality
;
Female
;
Humans
;
Intensive Care Units
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Male
;
Middle Aged
;
Multiple Organ Failure
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Republic of Korea/epidemiology
;
Retrospective Studies
;
Risk Factors
;
Serratia Infections/diagnosis/drug therapy/*mortality
;
Serratia marcescens/drug effects/*isolation & purification
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Severity of Illness Index
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Survival Rate
;
Time Factors
;
Treatment Outcome