1.Efficient production of L-asparaginase in Bacillus licheniformis by optimizing expression elements and host.
Xinyuan YANG ; Yi RAO ; Mengxi ZHANG ; Jiaqi WANG ; Wenyuan LIU ; Dongbo CAI ; Shouwen CHEN
Chinese Journal of Biotechnology 2023;39(3):1096-1106
L-asparaginase (L-ASN) is widely applied in the treatment of malignant tumor and low-acrylamide food production, however, the low expression level hampers its application. Heterologous expression is an effective strategy to increase the expression level of target enzymes, and Bacillus is generally used as the host for efficient production of enzymes. In this study, the expression level of L-asparaginase in Bacillus was enhanced through optimization of expression element and host. Firstly, five signal peptides (SPSacC, SPAmyL, SPAprE, SPYwbN and SPWapA) were screened, among which SPSacC showed the best performance, reaching an activity of 157.61 U/mL. Subsequently, four strong promoters (P43, PykzA-P43, PUbay and PbacA) from Bacillus were screened, and tandem promoter PykzA-P43 showed the highest yield of L-asparaginase, which was 52.94% higher than that of control strain. Finally, three Bacillus expression hosts (B. licheniformis Δ0F3 and BL10, B. subtilis WB800) were investigated, and the maximum L-asparaginase activity, 438.3 U/mL, was reached by B. licheniformis BL10, which was an 81.83% increase compared with that of the control. This is also the highest level of L-asparaginase in shake flask reported to date. Taken together, this study constructed a B. licheniformis strain BL10/PykzA-P43-SPSacC-ansZ capable of efficiently producing L-asparaginase, which laid the foundation for industrial production of L-asparaginase.
Bacillus licheniformis/metabolism*
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Asparaginase/genetics*
;
Bacillus/genetics*
;
Protein Sorting Signals
;
Promoter Regions, Genetic/genetics*
;
Bacillus subtilis/genetics*
;
Bacterial Proteins
2.Transformation of baicalin and wogonoside through liquid fermentation with Bacillus natto.
Hou-ning LONG ; Shuo ZHANG ; Lei YAO ; Min ZHANG ; Peng-jiao WANG ; Xiao-xia MENG ; Xiu GAO ; Rong-ping ZHANG
China Journal of Chinese Materia Medica 2015;40(23):4623-4628
This experiment aimed to explore and research the process of preparing baicalein and wogonin through liquid fermentation with Bacillus natto. Active enzymes of produced by B. natto was used for the biological transformation of baclin and wogonoside, in order to increase the content of the haicalein and wogonin in the scutellaria. With the content of the baicalein and wogonin as evaluating indexes, the effects of carbon source, nitrogen source, the types and suitable concentration of inorganic salt, medium pH, granularities of medical materials, liquid volume in flask, shaking speed, liquid-to-solid ratio, fermentation time on the fermentation process were studied. The optimal process conditions for liquid fermentation of scutellaria were 1.0% of peptone, 0.05% of NaCl, pH at 6, the granularities of medical materials of the scutellaria screened through 40-mesh sifter, 33% of liquid, shaker incubator speed at 200 r x min(-1), liquid-to-solid ratio of 5:1, temperature at 37 degrees C, fermentation for 6 days, baclin's conversion rate at 97.6% and wogonoside's conversion rate at 97% in the scutellaria. According to the verification test, the process was stable and feasible, and could provide data reference for the industrial production.
Bacillus subtilis
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metabolism
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Biotransformation
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Fermentation
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Flavanones
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metabolism
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Flavonoids
;
metabolism
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Glucosides
;
metabolism
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Soy Foods
;
microbiology
3.Quantitation & optimization of guanosine fermentation process: prevention of NH4+ accumulation increases guanosine production by 70%.
Ming-Zhi HUANG ; Xian-Peng CAI ; Shuang-Xi CHEN ; Ju CHU ; Ying-Ping ZHUANG ; Si-Liang ZHANG
Chinese Journal of Biotechnology 2003;19(2):200-205
Metabolic engineering has become a powerful tool for optimization of industrial fermentation processes. Metabolic engineering usually undergoes three steps: construction of a recombinant strain with improved properties, genetic and biochemical analysis of the strain, and identification of target for further improvement. Metabolic fluxes analysis is an important part of the biochemical analysis. Based on the law of mass conservation and assuming pseudo-steady-state for the intermediates in the metabolic pathways, we have quantitatively analyzed the time course of the flux distribution in Bacillus subtilis and used the data to reveal the nature of the so-called "40 hour" phenomenon in fermentation of guanosine, a key raw material for the synthesis of additives for human consumption and animal feeds. The phenomenon refers to the observation that guanosine production, which proceeds at high rate from 12 hour on, declines around 40 hour while consumption of glucose keeps increasing, leading to the lower yield of the nucleoside. Equations based upon the metabolic network of Bacillus subtilis consisted of EMP pathway, HMP pathway, TCA cycle, oxidative phosphorylation pathway and others reactions of the intermediates, was constructed. The equations were solved by using the quantitative data obtained in this study. The air flow and volume, concentration of oxygen and carbon dioxide in the exit-gas were monitored online; the concentration of biomass, glucose and guanosine was analyzed manually; and the concentration of acetate, citric acid, pyruvate, and 17 amino acids were HPLC quantified. The solutions of the equation were proved to be valid, as the experimental data on oxygen consumption agrees with that of predicted form the equation. The results indicated that at 40h of the fermentation process the flux of HMP pathway, which provides the precursor of the nucleoside, decreased while that of EMP pathway and the pathways that generate amino acids and organic acids increased. The shift correlated with the accumulation of NH4+ in the broth. The assimilation of NH4+ is an energy consuming process and could shift the metabolism to the energy generating EMP pathway. Accordingly, measures were taken to prevent the accumulation of NH4+. The interference indeed stopped the metabolism shift and boosted the guanosine production at 30 g/L, 70% higher than the level reported in literature.
Bacillus subtilis
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metabolism
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Fermentation
;
physiology
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Guanosine
;
metabolism
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Models, Theoretical
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Quaternary Ammonium Compounds
;
metabolism
4.Functional analysis of functional membrane microdomains in the biosynthesis of menaquinone-7.
Yajun DONG ; Shixiu CUI ; Yanfeng LIU ; Jianghua LI ; Guocheng DU ; Xueqin LÜ ; Long LIU
Chinese Journal of Biotechnology 2023;39(6):2215-2230
Functional membrane microdomains (FMMs) that are mainly composed of scaffold proteins and polyisoprenoids play important roles in diverse cellular physiological processes in bacteria. The aim of this study was to identify the correlation between MK-7 and FMMs and then regulate the MK-7 biosynthesis through FMMs. Firstly, the relationship between FMMs and MK-7 on the cell membrane was determined by fluorescent labeling. Secondly, we demonstrated that MK-7 is a key polyisoprenoid component of FMMs by analyzing the changes in the content of MK-7 on cell membrane and the changes in the membrane order before and after destroying the integrity of FMMs. Subsequently, the subcellular localization of some key enzymes in MK-7 synthesis was explored by visual analysis, and the intracellular free pathway enzymes Fni, IspA, HepT and YuxO were localized to FMMs through FloA to achieve the compartmentalization of MK-7 synthesis pathway. Finally, a high MK-7 production strain BS3AT was successfully obtained. The production of MK-7 reached 300.3 mg/L in shake flask and 464.2 mg/L in 3 L fermenter.
Bacillus subtilis/metabolism*
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Vitamin K 2/metabolism*
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Bioreactors/microbiology*
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Membrane Microdomains/metabolism*
5.Development of biosensors highly responsive to N-acetylneuraminic acid in Bacillus subtilis.
Jiaqi SUN ; Yanting CAO ; Xueqin LÜ ; Jianghua LI ; Long LIU ; Guocheng DU ; Jian CHEN ; Yanfeng LIU
Chinese Journal of Biotechnology 2023;39(5):2502-2516
Bacillus subtilis is recognized as a generally-regarded-as-safe strain, and has been widely used in the biosynthesis of high value-added products, including N-acetylneuraminic acid (NeuAc) which is widely used as a nutraceutical and a pharmaceutical intermediate. Biosensors responding to target products are widely used in dynamic regulation and high-throughput screening in metabolic engineering to improve the efficiency of biosynthesis. However, B. subtilis lacks biosensors that can efficiently respond to NeuAc. This study first tested and optimized the transport capacity of NeuAc transporters, and obtained a series of strains with different transport capacities for testing NeuAc-responsive biosensors. Subsequently, the binding site sequence of Bbr_NanR responding to NeuAc was inserted into different sites of the constitutive promoter of B. subtilis, and active hybrid promoters were obtained. Next, by introducing and optimizing the expression of Bbr_NanR in B. subtilis with NeuAc transport capacity, we obtained an NeuAc-responsive biosensor with wide dynamic range and higher activation fold. Among them, P535-N2 can sensitively respond to changes in intracellular NeuAc concentration, with the largest dynamic range (180-20 245) AU/OD. P566-N2 shows a 122-fold of activation, which is 2 times of the reported NeuAc-responsive biosensor in B. subtilis. The NeuAc-responsive biosensor developed in this study can be used to screen enzyme mutants and B. subtilis strains with high NeuAc production efficiency, providing an efficient and sensitive analysis and regulation tool for biosynthesis of NeuAc in B. subtilis.
N-Acetylneuraminic Acid/metabolism*
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Bacillus subtilis/metabolism*
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Promoter Regions, Genetic/genetics*
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Binding Sites
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Biosensing Techniques
6.Microfluidic chip for detecting the expression of green fluorescent protein in Bacillus subtilis.
Huijun DONG ; Jinglin FU ; Yongquan LI ; Junyun JIANG
Chinese Journal of Biotechnology 2009;25(7):1077-1081
Laser scanning confocal microscope (LSCM) is currently the only equipment to observe fluorescence. However, this technique has disadvantages such as high cost and long test process. In this study, we developed a new system of laser-induced fluorescence (LIF) for microfluidic chip applied to detecting the expression of green fluorescent protein (GFP) in Bacillus subtilis. This novel system was comprised of laser device, optics unit, microfluidic chip, photomultiplier and computer treatment unit. The tests indicated that microfluidic chip could detect the expression of GFP as sensitively as LSCM in Bacillus subtilis. Moreover, this LIF detection system could instead of PCR to identify the positive clone in this special case. Nevertheless, the LIF system only was suitable to detect the fluorescent strength of GFP, and could not meet the request of some cases for example protein location. Therefore, this system will be applied in environmental detection with microbe, drug discovery and other cases.
Bacillus subtilis
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isolation & purification
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metabolism
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Green Fluorescent Proteins
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biosynthesis
;
genetics
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Microfluidic Analytical Techniques
;
methods
7.Construction and optimization of engineered Bacillus subtilis for surfactin production.
Miaomiao WANG ; Huimin YU ; Xin HE ; Yanmei LI ; Huaiyu YANG
Chinese Journal of Biotechnology 2020;36(11):2377-2386
Surfactin has great potential applications in enhancing oil recovery, agriculture, pharmaceuticals, foods and beverages, and cosmetics due to its extraordinary surface activity, biodegradability, anti-bacterial activity and biocompatibility. Enhancing surfactin production by engineering surfactin-producer and optimizing culture conditions is the key of its industrial production and subsequent applications. In this study, the effect of fatty acid synthesis pathway on surfactin synthesis was investigated, and Bacillus subtilis THBS-2 and THBS-8 with high surfactin titer were constructed by overexpressing key genes involved in the fatty acid synthesis pathway. To optimize culture condition, the amount and adding time of isopropyl-beta-D-thiogalactopyranoside (IPTG) and amino acids were studied, and a two-stage culture method was obtained: IPTG (final concentration: 1.25 mmol/L) and leucine (final concentration: 5 g/L) were added at 3 h, leucine (final concentration 5 g/L) and condensed culture medium (5 mL) were added at 24 h. Applying this strategy, the surfactin titer of B. subtilis THBS-2 reached to 24 g/L in shake flask at 48 h and up to 34 g/L after 68 h fermentation in a 30-L fermentor. The results provide basis for large-scale production and broad application of surfactin.
Amino Acids
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Bacillus subtilis/metabolism*
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Culture Media
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Fermentation
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Lipopeptides
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Peptides, Cyclic
8.Bioconversion of D-fructose to D-allose by novel isomerases.
Wei BAI ; Yueming ZHU ; Yan MEN ; Xiaobo LI ; Ken IZUMORI ; Yuanxia SUN
Chinese Journal of Biotechnology 2012;28(4):457-465
Rare sugar is a kind of important low-energy monosaccharide that is rarely found in nature and difficult to synthesize chemically. D-allose, a six-carbon aldose, is an important rare sugar with unique physiological functions. It is radical scavenging active and can inhibit cancer cell proliferation. To obtain D-allose, the microorganisms deriving D-psicose 3-epimerase (DPE) and L-rhamnose isomerase (L-RhI) have drawn intense attention. In this paper, DPE from Clostridium cellulolyticum H10 was cloned and expressed in Bacillus subtilis, and L-RhI from Bacillus subtilis 168 was cloned and expressed in Escherichia coli BL21 (DE3). The obtained crude DPE and L-RhI were then purified through a HisTrap HP affinity chromatography column and an anion-exchange chromatography column. The purified DPE and L-RhI were employed for the production of rare sugars at last, in which DPE catalyzed D-fructose into D-psicose while L-RhI converted D-psicose into D-allose. The conversion of D-fructose into D-psicose by DPE was 27.34%, and the conversion of D-psicose into D-allose was 34.64%.
Aldose-Ketose Isomerases
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metabolism
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Bacillus subtilis
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enzymology
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Carbohydrate Epimerases
;
metabolism
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Clostridium cellulolyticum
;
enzymology
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Escherichia coli
;
metabolism
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Fructose
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metabolism
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Glucose
;
metabolism
9.Proteomic analysis of Bacillus subtilis 168 transforming cis-propenylphosphonic acid to fosfomycin.
Fuhong XIE ; Yapeng CHAO ; Jiaji SHI ; Guoqing ZHANG ; Jing YANG ; Shijun QIAN
Chinese Journal of Biotechnology 2013;29(6):735-750
In this study, we investigated the mechanism of transformation by Bacillus subtilis strain 168 by proteomic analysis. B. subtilis strain 168 was able to stereoselectively transform cis-propenylphosphonic acid (cPPA) to fosfomycin. The maximal fosfomycin production was 816.6 microg/mL after two days cultivation, with a conversion rate of 36.05%. We separated the whole cellular proteins by two-dimensional gel electrophoresis (2-DE) method, and 562 protein spots were detected in the presence of cPPA in the medium, while 527 protein spots were detected in the absence of cPPA. Of them, 98 differentially expressed protein spots were found. Among them, 52 proteins were up-regulated whereas 20 were down-regulated in the presence of cPPA in the medium, and 26 induced at the presence of cPPA. The differentially expressed proteins were analyzed by combined MS and MS/MS methods. Eighty protein spots, including 45 up-regulated proteins, 17 down-regulated proteins, and 18 induced by cPPA were identified. Based on the results of proteomic analysis, we postulated two steps of transformation: in the first step, cPPA was hydrated to 2-hydroxypropylphosphonic acid; in the second step, 2-hydroxypropylphosphonic acid was transformed to fosfomycin via a dehydrogenation reaction.
Bacillus subtilis
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genetics
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growth & development
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metabolism
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Bacterial Proteins
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metabolism
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Biotransformation
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Fosfomycin
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metabolism
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Organophosphorus Compounds
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metabolism
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Proteome
;
metabolism
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Proteomics
10.Microbial production of chondroitin sulfate: a review.
Qiulin WU ; Liming LIU ; Jian CHEN
Chinese Journal of Biotechnology 2012;28(11):1281-1293
Chondroitin sulfate (CS) is the typical sulfation glycosaminoglycan and widely applied in the industries of pharmaceutical, health products and cosmetic for its peculiar properties. CS is the main component of cartilage proteoglycans in animal and capsular polysaccharide in a few bacteria. CS can be extracted from animal sources and produced via microbial fermentation. In this article, development of chondroitin sulfate by fermentation, biosynthesis and regulating mechanisms of CS in bacteria are described. Furthermore, prospect and tendency of chondroitin sulfate from bacterial fermentation are addressed.
Bacillus subtilis
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metabolism
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Bacteria
;
genetics
;
metabolism
;
Chondroitin Sulfates
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biosynthesis
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Escherichia coli
;
metabolism
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Fermentation
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Genetic Engineering
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Industrial Microbiology
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Pasteurella multocida
;
metabolism