1.Fungal Genotyping – Current Clinical Application
Malaysian Journal of Medical Sciences 2014;21(6):1-2
The emergence of fungal species as opportunistic pathogens has warranted further studies on their pathogenicity, epidemiology, and transmissibility. Fungal genotyping has been employed to study the genetic relatedness within the organism, in order to obtain answers to epidemiological questions (such as in outbreak confirmation) as well as to provide basis for the improvement for patients care. Various fungal genotyping methods have been previously published, which can be chosen depending on the intended use and the capability of individual laboratory.
2.Risk factors and outcomes of imipenem-resistant Acinetobacter bloodstream infection in North-eastern Malaysia
Deris Zainy Zakuan ; Shafei Nazri Mohd ; Harun Azian
Asian Pacific Journal of Tropical Biomedicine 2011;(4):313-315
Objective: To determine the risk factors and outcomes of imipenem-resistant Acinetobacterbaumannii (IRAB) bloodstream infection (BSI) cases, since there is very little publication on Acinetobacter baumannii infections from Malaysia. Methods: A cross sectional study of 41 cases (73.2%) of imipenem-sensitive Acinetobacter baumanii (ISAB) and 15 cases (26.8%) of IRAB was conducted in a teaching hospital which was located at North-Eastern state of Malaysia. Results:There was no independent risk factor for IRAB BSI identified but IRAB BSI was significantly associated with longer bacteraemic days [OR 1.23 (95% CI 1.01, 1.50)]. Although prior use of carbepenems and cephalosporin were higher among IRAB than ISAB group, statistically they were not significant. There was no significant difference in term of outcomes between the two groups. Conclusions: Although statistically not significant, this analysis compliments previous publication highlighting the importance of appropriate empiric antibiotic usage in hospital especially carbepenems and need further evaluation with bigger subjects.
3.Risk factors and outcomes of imipenem-resistant Acinetobacter bloodstream infection in North-Eastern Malaysia.
Zakuan Zainy DERIS ; Mohd Nazri SHAFEI ; Azian HARUN
Asian Pacific Journal of Tropical Biomedicine 2011;1(4):313-315
OBJECTIVETo determine the risk factors and outcomes of imipenem-resistant Acinetobacter baumannii (IRAB) bloodstream infection (BSI) cases, since there is very little publication on Acinetobacter baumannii infections from Malaysia.
METHODSA cross sectional study of 41 cases (73.2%) of imipenem-sensitive Acinetobacter baumanii (ISAB) and 15 cases (26.8%) of IRAB was conducted in a teaching hospital which was located at North-Eastern state of Malaysia.
RESULTSThere was no independent risk factor for IRAB BSI identified but IRAB BSI was significantly associated with longer bacteraemic days [OR 1.23 (95% CI 1.01, 1.50)]. Although prior use of carbepenems and cephalosporin were higher among IRAB than ISAB group, statistically they were not significant. There was no significant difference in term of outcomes between the two groups.
CONCLUSIONSAlthough statistically not significant, this analysis compliments previous publication highlighting the importance of appropriate empiric antibiotic usage in hospital especially carbepenems and need further evaluation with bigger subjects.
Acinetobacter Infections ; drug therapy ; epidemiology ; microbiology ; Acinetobacter baumannii ; drug effects ; isolation & purification ; Adult ; Aged ; Aged, 80 and over ; Anti-Bacterial Agents ; pharmacology ; therapeutic use ; Bacteremia ; drug therapy ; epidemiology ; microbiology ; Case-Control Studies ; Cross-Sectional Studies ; Female ; Hospitals, Teaching ; Humans ; Imipenem ; pharmacology ; therapeutic use ; Malaysia ; epidemiology ; Male ; Middle Aged ; Risk Factors ; Treatment Outcome ; Young Adult ; beta-Lactam Resistance
4.A Critical Appraisal of COVID-19 in Malaysia and Beyond
Jafri Malin Abdullah1 ; Wan Faisham Nu&rsquo ; man Wan Ismail ; Irfan Mohamad ; Asrenee Ab Razak ; Azian Harun ; Kamarul Imran Musa ; Yeong Yeh Lee1
Malaysian Journal of Medical Sciences 2020;27(2):1-9
When the first report of COVID-19 appeared in December 2019 from Wuhan, China, the
world unknowingly perceived this as another flu-like illness. Many were surprised at the extreme
steps that China had subsequently taken to seal Wuhan from the rest of the world. However, by
February 2020, the SARS-CoV-2 virus, which causes COVID-19, had spread so quickly across the
globe that the World Health Organization officially declared COVID-19 a pandemic. COVID-19 is
not the first pandemic the world has seen, so what makes it so unique in Malaysia, is discussed to
avoid a future coronacoma.
5.C-reactive Protein, Albumin, Urea, CRP/Albumin Ratio, and Urea/Albumin Ratio: A Retrospective Evaluation in COVID-19 Patients
Nor Amirah Mohammad Nazri ; Wan Norlina Wan Azman ; Norsyuhadah Musa ; Tuan Salwani Tuan Ismail ; Azian Harun ; Najib Majdi Yaacob ; Sarina Sulong ; Sirajudeen K.N.S ; Mahaya Che Mat ; Hani Ajrina Zulkeflee ; Siti Sarah Mustapa
Malaysian Journal of Medicine and Health Sciences 2023;19(No.6):164-170
Introduction: C-reactive protein (CRP), urea, albumin, CRP/albumin ratio (CAR) and urea/albumin ratio (UAR) could
be valuable biomarkers for determining the severity of illness in patients with COVID-19. This study aimed to determine the association between these markers and disease severity in COVID-19 patients on admission and days five to
seven after admission. Methods: This retrospective study includes 153 adult COVID-19 patients admitted to Hospital
Raja Perempuan Zainab II and Hospital Ampang from January 2021 to December 2021. Patients’ serum CRP, urea,
albumin and creatinine levels were recorded on admission and on days five to seven after admission. The patients
were categorised based on the Annex 2e guidelines published by the Ministry of Health, Malaysia and further classified as mild to moderate disease (stages 1-3) and severe to critical illness (stages 4-5). Results: On admission, urea,
creatinine, CRP, UAR and CAR were significantly higher in the severe to critical group (p<0.001). The optimal cut-off
value for the UAR was 0.16; the area under the curve (AUC) was 0.760, and sensitivity and specificity were 63.6%
and 85.7%, respectively. The AUC of the CAR was 0.752, with 54.2% sensitivity and 91.4% specificity at an optimal
cut-off value of 1.63. In severe to critical COVID-19 patients, albumin levels decreased significantly on days five to
seven after admission, while urea levels remained significantly higher in this group (p<0.001, p<0.05, respectively).
Conclusion: CRP, urea, albumin, CAR and UAR are promising biomarkers for predicting the severity of disease in
COVID-19 patients.
6.Linezolid-resistant Enterococcus casseliflavus and Enterococcus gallinarum isolated from poultry farms in Kelantan, Malaysia
Nur Syafiqah Mohamad Nasir ; Yean Yean Chan ; Azian Harun ; Azlan Husin ; Nor Fadhilah Kamaruzzaman ; Yusuf Wada ; Zaidah Abdul-Rahman
Malaysian Journal of Microbiology 2021;17(4):361-368
Aims:
Linezolid has become a decisive therapy in treating infections with vancomycin-resistant Enterococcus (VRE).
Currently, the emergence of linezolid-resistant Enterococcus further complicates the therapeutic options and leads to
global health threat not only in hospital setting but in the community. The study aimed at antimicrobial pattern of
Enterococcus isolated from 6 poultry farms in Kelantan, Malaysia.
Methodology and results:
Between February and December 2019, 300 broiler cloacal swab sample (Gallus gallus
domesticus) were collected and screened for linezolid-resistant enterococci (LRE) using a standard biochemical and
antimicrobial susceptibility tests. Among all the samples, 32.3% (n=97/300) grew Enterococcus, 71.1% (n=69/97) of it
were identified Enterococcus casseliflavus by molecular identification, whilst remaining isolates 28.9% (n=28/97) were
further identified as Enterococcus gallinarum by 16S rRNA sequencing. None of the isolates were found to exhibit high-level resistance to vancomycin. However, 3/97 (3.1%) were exhibit resistance to high-level gentamicin based on Kirby-Bauer disk diffusion test. Whereas 48/97 (49.5%) of isolates were observed to be resistant to ampicillin, 28/97 (28.9%)
were resistant to penicillin. Surprisingly, among the two strains isolated, 18.6% (n=18/97) of it were resistant to linezolid.
Isolates showed resistance to linezolid by disk diffusion test were verified by VITEK-2 automated system (bioMérieux,
USA) with MIC ≥8 µg/mL. All antimicrobial susceptibility test and minimal inhibitory concentration (MIC) results were
interpreted according to Clinical and Laboratory Standard Institute (CLSI).
Conclusion, significance and impact of study
In conclusion, this study has reported the prevalence of linezolid
resistant Enterococcus (LRE) in highly intrinsic antibiotic resistant of E. casseliflavus and E. gallinarum in Malaysia
poultry farms, alongside with the truancy of vanA strains. The emergence of LRE strains is an alarming problem to the
animal husbandry and healthcare setting worldwide. This could lead to potentially untreatable and life-threatening
enterococcal infections. Even more worrying is the spread of LRE to geographical regions where these strains were
previously unreported, which may pose a global health threat. Antimicrobial surveillance in poultry husbandry is thus,
dimly necessary to prevent wide spread of multidrug-resistant bacteria.
Linezolid
;
Enterococcus
;
Farms
7.Antifungal effects and phytochemical screening of Andrographis paniculata extracts on dermatomycoses
Tuan Kub Tuan Noorkorina ; Farhaana Mohd Ab Aziz ; Anis Amiera Muhamad Alojid ; Nursaadatun Nisak Ahmad ; Zeti Nurfidiyati Salmuna ; Siti Asma&rsquo ; Hassan ; Sabarisah Hashim ; Azian Harun
Malaysian Journal of Microbiology 2021;17(5):576-587
Aims:
Andrographis paniculata (AP), a medicinal herb was selected to investigate the antifungal activity on selected dermatophyte fungi. The phytochemical screening was also carried out to evaluate its chemical constituents.
Methodology and results:
The potato dextrose agar (PDA) incorporated with aqueous, ethanol and methanol AP extracts at concentrations 0.99% (v/v), 1.96% (v/v) and 7.41% (v/v) were used for selected fungi culturing; Trichophyton mentagrophytes, T. rubrum, T. interdigitale, Microsporum fulvum, M. nanum, M. gypseum, M. canis, Fusarium solani and Aspergillus fumigatus. Phytochemical screening showed the presence of flavonoids, saponins and tannins in the ethanol extract and flavonoids alone in both aqueous and methanol extracts. Studies on antifungal effects indicated that the ethanol extract significantly increased the mycelial inhibition percentage of all tested fungi, especially at a concentration of 7.41% (v/v). All ethanol AP extract concentrations inhibited M. gypseum and M. canis (p<0.05) with at least 36.00% mycelial inhibition. In aqueous AP extract, it significantly increased the mycelial inhibition of T. mentagrophytes, T. interdigitale and M. gypseum (p<0.05), while the methanol AP extract significantly inhibited all fungi at a concentration of 7.41% (v/v) except for T. rubrum, M. gypseum and F. solani (p<0.05). No spore sedimentation was recorded for the fungal spores of T. rubrum, M. nanum, T. mentagrophytes, M. gypseum and T. interdigitale at 7.41% (v/v) ethanol AP.
Conclusion, significance and impact of study
It is concluded that the ethanol AP extract contained phytochemical constituents and showed the highest antifungal activity. In addition, this extract has a great potential to treat dermatophytes effectively.
Antifungal Agents
;
Phytochemicals
;
Andrographis paniculata
;
Dermatomycoses
8.Vancomycin and Linezolid dosing in Obese and Overweight Patients: Is There a Universally Accepted Dosing Protocol to Improve their Efficacy?
Wada Yusuf ; Mustapha Sagir ; Irekeola Adebayo Ahmed ; Muhammad Suwaiba Ladan ; Harun Azian ; Chan Yean Yean ; Zaidah Abdul Rahman
Malaysian Journal of Medicine and Health Sciences 2022;18(No.3):166-173
Vancomycin is used to manage methicillin-resistant Staphylococcus aureus (MRSA) and other bacterial infections that are Gram-positive in nature. Linezolid belongs to the oxazolidinone class of antibiotics, which is primarily used to treat vancomycin-resistant Enterococcus (VRE), MRSA, diabetic foot, soft tissue, and skin infections. Here, we discuss vancomycin and linezolid dosing in obese patients, their mechanism of actions, pharmacokinetics, problems with dosing and evaluation of several dosing protocols in the obese patient population. There is no generally accepted dosing protocol for linezolid and vancomycin. Evidence suggests that using trough concentrations alone is insufficient for estimating vancomycin and linezolid exposure accurately as many researchers have revised protocol guidelines, developed more rigorous dosing and monitoring guidelines, or developed novel dosage strategies to meet the needs of overweight patients. Peaks and troughs measurement should be considered because it improves precision and reduces the area under the curve (AUC) estimate bias. To provide better dosing guidelines in this vulnerable group, obese patients must be included in all phases of drug design.