1.A Survey of Educational Needs for Certified Nurse Specialists and Certified Nurses in Kagoshima Prefecture
Saori YAMAGUCHI ; Rika YATSUSHIRO ; Atsuko YOSHIDOME
Journal of the Japanese Association of Rural Medicine 2010;59(1):35-43
Although the nurse certification system was established by the Japanese Nursing Association in 1994, there are currently no educational institutions in Kagoshima Prefecture for certified nurse specialists (CNS) and certified nurses (CN). The aim of this study was to sound out generalist nurses working in hospitals in Kagoshima Prefecture on CNS and CN educational needs in order to determine methods of supporting those aspirational nurses in the development of their careers. A (self-administered) questionnaire survey was conducted on 1,800 nurses working at 40 hospitals in Kagoshima Prefecture in September 2008. Responses came from 1,258 (69.9%) nurses, of which 999 (79.4%) were valid. Of the respondents, 40.9% indicated they would like to obtain a CNS license, while 56.5% indicated they would like to obtain a CN license. Regarding the CNS license, most respondents wanted to obtain CNS qualification in cancer nursing, followed by acute/critical care nursing. Regarding the CN license, CN qualification in emergency nursing came to the top followed by palliative care nursing. As Kagoshima Prefecture is comprised of remote islands and remote rural areas, it is a disadvatage for many nurses geographically to staisfy their education needs. These results suggest that in order to support nurses' career development, it is necessary to establish an individual consultation system for career development and develop a flexible educational curriculum.
2.A proof-of-concept study of extracting patient histories for rare/intractable diseases from social media
Atsuko YAMAGUCHI ; Núria QUERALT-ROSINACH
Genomics & Informatics 2020;18(2):e17-
The amount of content on social media platforms such as Twitter is expanding rapidly. Simultaneously, the lack of patient information seriously hinders the diagnosis and treatment of rare/intractable diseases. However, these patient communities are especially active on social media. Data from social media could serve as a source of patient-centric knowledge for these diseases complementary to the information collected in clinical settings and patient registries, and may also have potential for research use. To explore this question, we attempted to extract patient-centric knowledge from social media as a task for the 3-day Biomedical Linked Annotation Hackathon 6 (BLAH6). We selected amyotrophic lateral sclerosis and multiple sclerosis as use cases of rare and intractable diseases, respectively, and we extracted patient histories related to these health conditions from Twitter. Four diagnosed patients for each disease were selected. From the user timelines of these eight patients, we extracted tweets that might be related to health conditions. Based on our experiment, we show that our approach has considerable potential, although we identified problems that should be addressed in future attempts to mine information about rare/intractable diseases from Twitter.
3.A proof-of-concept study of extracting patient histories for rare/intractable diseases from social media
Atsuko YAMAGUCHI ; Núria QUERALT-ROSINACH
Genomics & Informatics 2020;18(2):e17-
The amount of content on social media platforms such as Twitter is expanding rapidly. Simultaneously, the lack of patient information seriously hinders the diagnosis and treatment of rare/intractable diseases. However, these patient communities are especially active on social media. Data from social media could serve as a source of patient-centric knowledge for these diseases complementary to the information collected in clinical settings and patient registries, and may also have potential for research use. To explore this question, we attempted to extract patient-centric knowledge from social media as a task for the 3-day Biomedical Linked Annotation Hackathon 6 (BLAH6). We selected amyotrophic lateral sclerosis and multiple sclerosis as use cases of rare and intractable diseases, respectively, and we extracted patient histories related to these health conditions from Twitter. Four diagnosed patients for each disease were selected. From the user timelines of these eight patients, we extracted tweets that might be related to health conditions. Based on our experiment, we show that our approach has considerable potential, although we identified problems that should be addressed in future attempts to mine information about rare/intractable diseases from Twitter.
4.O-JMeSH: creating a bilingual English-Japanese controlled vocabulary of MeSH UIDs through machine translation and mutual information
Felipe SOARES ; Yuka TATEISI ; Terue TAKATSUKI ; Atsuko YAMAGUCHI
Genomics & Informatics 2021;19(3):e26-
Previous approaches to create a controlled vocabulary for Japanese have resorted to existing bilingual dictionary and transformation rules to allow such mappings. However, given the possible new terms introduced due to coronavirus disease 2019 (COVID-19) and the emphasis on respiratory and infection-related terms, coverage might not be guaranteed. We propose creating a Japanese bilingual controlled vocabulary based on MeSH terms assigned to COVID-19 related publications in this work. For such, we resorted to manual curation of several bilingual dictionaries and a computational approach based on machine translation of sentences containing such terms and the ranking of possible translations for the individual terms by mutual information. Our results show that we achieved nearly 99% occurrence coverage in LitCovid, while our computational approach presented average accuracy of 63.33% for all terms, and 84.51% for drugs and chemicals.
5.Constructing Japanese MeSH term dictionaries related to the COVID-19 literature
Atsuko YAMAGUCHI ; Terue TAKATSUKI ; Yuka TATEISI ; Felipe SOARES
Genomics & Informatics 2021;19(3):e25-
The coronavirus disease 2019 (COVID-19) pandemic has led to a flood of research papers and the information has been updated with considerable frequency. For society to derive benefits from this research, it is necessary to promote sharing up-to-date knowledge from these papers. However, because most research papers are written in English, it is difficult for people who are not familiar with English medical terms to obtain knowledge from them. To facilitate sharing knowledge from COVID-19 papers written in English for Japanese speakers, we tried to construct a dictionary with an open license by assigning Japanese terms to MeSH unique identifiers (UIDs) annotated to words in the texts of COVID-19 papers. Using this dictionary, 98.99% of all occurrences of MeSH terms in COVID-19 papers were covered. We also created a curated version of the dictionary and uploaded it to PubDictionary for wider use in the PubAnnotation system.
6.Intake rate of folic acid among pregnant women consulting the Japan Drug Information Institute in Pregnancy
Mariko Ishii ; Ken Nakajima ; Kenji Kushida ; Atsuko Murashima ; Koushi Yamaguchi ; Noriyoshi Watanabe ; Naoko Arata ; Naoki Ito ; Omi Watanabe ; Seiko Irie ; Michihiro Kitagawa
Japanese Journal of Drug Informatics 2009;11(2):107-114
Objective: In 2000, the Ministry of Health and Welfare issued an advisory that recommended intake of 0.4mg of folic acid in dietary supplements to reduce the risk of development of neural tube defects. Since subsequent reports of questionnaire surveys by various investigators showed a low in the intake rate, we surveyed and evaluated the folic acid intake rate among the pregnant women consulting the Japan Drug Information Institute in Pregnancy.
Methods: We evaluated differences in folic acid intake rate according to the consulting women’s background factors. i.e., age, pregnancy planning, pregnancy history, and taking of anticonvulsant drugs in the 1053 women capable of participating in the survey among the 1061 pregnant women who requested a consultation with the Japan Drug Information Institute in Pregnancy between April 2006 and August 2008.
Results: According to the result of our survey, the intake rate of folic acid was 29% of the 1053 pregnant women. The only 3 women of the 42 pregnant women taking anticonvulsant drugs took folic acid before they got pregnant.
Conclusion: Even now, 8 years after the Ministry of Health and Welfare advisory, the folic acid intake rate is low. Drawing upon successful measures promoting intake in the U.S. and Canada,we play a vital role in delivering this critical health information to pregnant women.
7.Hokkaido birth cohort study on environment and children's health: cohort profile 2021.
Reiko KISHI ; Atsuko IKEDA-ARAKI ; Chihiro MIYASHITA ; Sachiko ITOH ; Sumitaka KOBAYASHI ; Yu AIT BAMAI ; Keiko YAMAZAKI ; Naomi TAMURA ; Machiko MINATOYA ; Rahel Mesfin KETEMA ; Kritika POUDEL ; Ryu MIURA ; Hideyuki MASUDA ; Mariko ITOH ; Takeshi YAMAGUCHI ; Hisanori FUKUNAGA ; Kumiko ITO ; Houman GOUDARZI
Environmental Health and Preventive Medicine 2021;26(1):59-59
BACKGROUND:
The Hokkaido Study on Environment and Children's Health is an ongoing study consisting of two birth cohorts of different population sizes: the Sapporo cohort and the Hokkaido cohort. Our primary objectives are to (1) examine the effects that low-level environmental chemical exposures have on birth outcomes, including birth defects and growth retardation; (2) follow the development of allergies, infectious diseases, and neurobehavioral developmental disorders, as well as perform a longitudinal observation of child development; (3) identify high-risk groups based on genetic susceptibility to environmental chemicals; and (4) identify the additive effects of various chemicals, including tobacco.
METHODS:
The purpose of this report is to provide an update on the progress of the Hokkaido Study, summarize recent results, and suggest future directions. In particular, this report provides the latest details from questionnaire surveys, face-to-face examinations, and a collection of biological specimens from children and measurements of their chemical exposures.
RESULTS:
The latest findings indicate different risk factors of parental characteristics on birth outcomes and the mediating effect between socioeconomic status and children that are small for the gestational age. Maternal serum folate was not associated with birth defects. Prenatal chemical exposure and smoking were associated with birth size and growth, as well as cord blood biomarkers, such as adiponectin, leptin, thyroid, and reproductive hormones. We also found significant associations between the chemical levels and neuro development, asthma, and allergies.
CONCLUSIONS
Chemical exposure to children can occur both before and after birth. Longer follow-up for children is crucial in birth cohort studies to reinforce the Developmental Origins of Health and Disease hypothesis. In contrast, considering shifts in the exposure levels due to regulation is also essential, which may also change the association to health outcomes. This study found that individual susceptibility to adverse health effects depends on the genotype. Epigenome modification of DNA methylation was also discovered, indicating the necessity of examining molecular biology perspectives. International collaborations can add a new dimension to the current knowledge and provide novel discoveries in the future.
Biomarkers/blood*
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Child
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Child Health
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Child, Preschool
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Cohort Studies
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Environmental Exposure/adverse effects*
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Environmental Health
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Environmental Pollutants/adverse effects*
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Female
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Fetal Blood/chemistry*
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Follow-Up Studies
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Growth/drug effects*
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Humans
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Hypersensitivity/etiology*
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Infant
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Japan/epidemiology*
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Male
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Neurodevelopmental Disorders/etiology*
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Pregnancy
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Prenatal Exposure Delayed Effects/etiology*
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Prevalence
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Smoking/adverse effects*