1.The Haplotype Analyses Using Multiple Markers of the Apolipoprotein B Gene in Patients with Coronary Artery Disease.
Seung Ho HONG ; Junghan SONG ; Jin Q KIM
Journal of Korean Medical Science 2001;16(6):719-724
The high level of low density lipoprotein (LDL) is a risk factor for cardiovascular disease. Apolipoprotein (apo) B is a major protein component of LDL and plays an important role in the maintenance of cholesterol homeostasis. In this study, six polymorphic sites of the apoB gene were anlaysed in 235 patients with coronary artery disease (CAD) and 216 normal control subjects. There were no significant differences in the allele frequencies of apoB polymorphisms between the control and patient groups. However, haplotype frequencies were significantly different between the CAD patients and control (p<0.05). In addition, the allelic distributions of both EcoRI and MspI polymorphisms in Koreans were similar to those in Chinese but significantly different from those in Caucasians. ApoB polymorphisms showed no association with plasma lipid levels. In conclusion, haplotype analysis of the apoB gene using multiple diallelic markers might be a useful marker for Korean CAD patients.
Adult
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Apolipoproteins B/*genetics
;
Coronary Arteriosclerosis/*genetics
;
Female
;
Gene Frequency
;
Genetic Markers
;
Haplotypes
;
Human
;
Korea
;
Male
;
Middle Age
;
Polymorphism (Genetics)
;
Variation (Genetics)
2.Loss of GRB2 associated binding protein 1 in arteriosclerosis obliterans promotes host autophagy.
Meng YE ; Xiang-Jiang GUO ; Ke-Jia KAN ; Qi-Hong NI ; Jia-Quan CHEN ; Han WANG ; Xin QIAN ; Guan-Hua XUE ; Hao-Yu DENG ; Lan ZHANG
Chinese Medical Journal 2020;134(1):73-80
BACKGROUND:
Arteriosclerosis obliterans (ASO) is a major cause of adult limb loss worldwide. Autophagy of vascular endothelial cell (VEC) contributes to the ASO progression. However, the molecular mechanism that controls VEC autophagy remains unclear. In this study, we aimed to explore the role of the GRB2 associated binding protein 1 (GAB1) in regulating VEC autophagy.
METHODS:
In vivo and in vitro studies were applied to determine the loss of adapt protein GAB1 in association with ASO progression. Histological GAB1 expression was measured in sclerotic vascular intima and normal vascular intima. Gain- and loss-of-function of GAB1 were applied in VEC to determine the effect and potential downstream signaling of GAB1.
RESULTS:
The autophagy repressor p62 was significantly downregulated in ASO intima as compared to that in healthy donor (0.80 vs. 0.20, t = 6.43, P < 0.05). The expression level of GAB1 mRNA (1.00 vs. 0.24, t = 7.41, P < 0.05) and protein (0.72 vs. 0.21, t = 5.97, P < 0.05) was significantly decreased in ASO group as compared with the control group. Loss of GAB1 led to a remarkable decrease in LC3II (1.19 vs. 0.68, t = 5.99, P < 0.05), whereas overexpression of GAB1 significantly led to a decrease in LC3II level (0.41 vs. 0.93, t = 7.12, P < 0.05). Phosphorylation levels of JNK and p38 were significantly associated with gain- and loss-of-function of GAB1 protein.
CONCLUSION
Loss of GAB1 promotes VEC autophagy which is associated with ASO. GAB1 and its downstream signaling might be potential therapeutic targets for ASO treatment.
Adaptor Proteins, Signal Transducing
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Adult
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Arteriosclerosis Obliterans/genetics*
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Autophagy
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GRB2 Adaptor Protein
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Humans
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Phosphoproteins/metabolism*
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Phosphorylation
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Protein Binding
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Signal Transduction
3.Apolipoprotein E genotypes of normal and hyperlipidemic subjects.
Young Seol KIM ; Jeong Ryung PAENG ; Jeong Taek WOO ; Sung Woo KIM ; In Myung YANG ; Jin Woo KIM ; Kwang Won KIM ; Young Kil CHOI
Journal of Korean Medical Science 1993;8(4):262-266
Apolipoprotein E (apo E) plays a role in the regulation of the lipid metabolism of humans. Apo E, 229 amino acid polypeptide, is classified into three major isoform (E2, E3, E4) according to the differences of amino acid in position 112 and 158. In the normal population apo E3 isoform is most prevalent and apo E2 or E4 is frequently associated with hyperlipoproteinemia. To find out the frequency of apo E isoform distribution in the Korean population, apo E genotyping was performed. After amplification of apoE gene by polymerase chain reaction (PCR), restriction isotyping was done by cleavage with restriction enzyme Hha I and polyacrylamide gel electrophoresis. The apo E allele frequency in 73 normal subjects was 4.8% for E2, 84.9% for E3 and 10.3% for E4. In diabetic patient with hyperlipoproteinemia, the frequency of apo E allele was 6.3% for E2, 81.0% for E3 and 12.7% for E4. There was no significant difference in apo E isoform distribution between diabetics and normal populations. But in patients with cardiovascular disease with hyperlipidemia, the apo E4 allele frequency was significantly higher than normal (20.0% vs 10.3%, p<0.005). Apo E3 was the most common isoform in normal and diabetic subjects and apo E2 isoform was rather low frequency compared to Caucasians. This pattern is similar to the Japanese population but somewhat different from other populations. From the data of a high association of apo E4 allele and cardiovascular disease with hypercholesterolemia, apo E isoform may be one of the determinants of hyperlipoproteinemia. The PCR method may be useful in apo E genotyping.
Apolipoproteins E/*genetics
;
Arteriosclerosis/*genetics
;
Base Sequence
;
Genotype
;
Humans
;
Hyperlipidemias/*genetics
;
Korea/epidemiology
;
Molecular Sequence Data
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Polymerase Chain Reaction
;
Predictive Value of Tests
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Reference Values
;
Restriction Mapping
4.Relationship of polymorphism of SG13S114A/T in ALOX5AP gene with atherosclerotic cerebral infarction.
Ying-Lei HE ; Min ZHU ; Xiao-Ping JIN ; Yuan-Lin ZHOU
Journal of Zhejiang University. Medical sciences 2009;38(6):630-633
OBJECTIVETo investigate the relationship of the polymorphism of SG13S114A/T in ALOX5AP gene with atherosclerotic cerebral infarction (ACI).
METHODSBy polymerase chain reaction and restriction fragment length polymorphism, polymorphism of SG13S114A/T in ALOX5AP gene in 412 cases with ACI and 368 non-ACI controls were analyzed.
RESULTThere were no statistically significant differences in the ALOX5AP gene SG13S114 AA genotype and A allele frequencies between ACI group and control group (P>0.05).
CONCLUSIONThe results do not support genotype SG13S114 A allele as the risk gene for ACI.control group.
5-Lipoxygenase-Activating Proteins ; genetics ; Alleles ; Cerebral Infarction ; etiology ; genetics ; Female ; Genotype ; Humans ; Intracranial Arteriosclerosis ; complications ; genetics ; Male ; Polymorphism, Restriction Fragment Length
5.Interleukin-10 genotype protects end stage renal disease patients from microinflammation and arteriosclerosis.
Hong-chi WU ; Hong LING ; Shi-ping NA ; Ru-juan XIE
Chinese Medical Journal 2005;118(18):1549-1551
Adult
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Aged
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Arteriosclerosis
;
epidemiology
;
prevention & control
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Female
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Genotype
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Humans
;
Incidence
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Inflammation
;
epidemiology
;
prevention & control
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Interleukin-10
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blood
;
genetics
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Kidney Failure, Chronic
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complications
;
genetics
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Male
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Middle Aged
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Polymorphism, Genetic
6.Screening differentially expressed genes in the process of vascular smooth muscle cell calcification in vitro.
Yu-mei WANG ; Shi-wen WANG ; Lan-ying CHEN ; Ping-sheng LI ; Xiu-yun DING
Chinese Journal of Applied Physiology 2004;20(3):272-275
AIMThe process of vascular calcification involves various genetic alterations which may play a very important role in the vascular calcification. Vascular smooth muscle cells undoubtedly composed the main part of vascular cells, and are involved in vascular calcification. So bovine artery smooth muscle cell (BASMC) was used to investigate the gene changes during BASMC's calcification.
METHODSBovine artery smooth muscle cells cultured in vitro was induced calcified by beta-Glycerophosphate (beta-GP). Using DD-PCR technique to screening differentially expressed genes and those differentially expressed bands were reexamined by reverse Northern blot. All the ESTs were sequenced and BLAST with GenBank.
RESULTSTotal 65 cDNAs were isolated as differentially expressed genes and 40 of them were successfully reamplified. Using reverse-Northern blot, seven of these 40 cDNAs were reproducibly expressed differentially between the two cells. Three of them are new bands and have not been reported before.
CONCLUSIONThis is the first time using DD-PCR to screen differentially expressed genes of BASMC calcification. Seven related ESTs were identified relating to BASMC calcification.
Animals ; Arteriosclerosis ; genetics ; metabolism ; pathology ; Cattle ; Cells, Cultured ; Expressed Sequence Tags ; Genetic Variation ; Muscle, Smooth, Vascular ; cytology ; Myocytes, Smooth Muscle ; metabolism ; pathology ; Vascular Calcification ; genetics ; metabolism ; pathology
7.SMARCAL1 gene analysis of 2 Chinese Schimke immuno-osseous dysplasia children.
Wei WANG ; Hongmei SONG ; Min WEI ; Zhengqing QIU ; Chen WANG ; Yu ZHANG ; Ming LI ; Yuheng YUAN ; Xiaoyan TANG
Chinese Journal of Pediatrics 2015;53(1):45-50
OBJECTIVESchimke immuno-osseous dysplasia (SIOD), is an autosomal recessive inherited disease caused by SMARCAL1 (MIM:20606622) mutations, while in about half of the patients no any mutation in SMARCAL1 could be found. This disease involves multiple systems and is characterized by short and dissymmetric stature with spondyloepiphyseal dysplasia, progressive renal failure, lymphopenia with recurrent infections, and hyperpigmented macules. This study aimed to analyze SMARCAL1 gene of 2 unrelated suspected SIOD children, to make definite diagnosis, and find more SMARCAL1 mutation types of Chinese SIOD.
METHODTwo suspected Chinese Han male SIOD children who visited our hospital from 2008 to 2014, aged 3 y 6 m and 7 y 8 m, both were short and had spondyloepiphyseal dysplasia, progressive renal failure, lymphopenia with recurrent infections. After informed consent, they and their parents's DNA were extracted from blood. PCRs for all 16 exons of SMARCAL1 were performed and PCR products were purified by 2% gel electrophoresis and sequenced directly. Pathogenicity of missense variations was confirmed by SIFT and sequencing SMARCAL1 of fifty normal controls.
RESULT(1) Four gene variations were found in the two children: Two reported missense mutations c.1129G>C, p.Glu377Gln and c.1933C>T, p. Arg645Cys. Two splicing mutations c.1334+1G>A and c.2142-1 G>A were detected. (2) c.1129G>C, p.Glu377Gln were reported as a disease-causing mutations before, but it was an single nucleotide polymorphism (SNP) which was found in 15 of 50 normal controls. (3) Two novel splicing mutations were found in this study: c.1334+1G>A and c.2142-1 G>A.
CONCLUSION(1) We detected 3 disease-causing mutations in 2 SIOD children by SMARCAL1 gene analysis, while 2 splicing mutations were novel mutations. (2) c.1129G>C, p.Glu377Gln was a SNP but not a disease-causing mutation at least in Chinese population.
Arteriosclerosis ; complications ; genetics ; Base Sequence ; Child ; Child, Preschool ; DNA Helicases ; genetics ; Exons ; Humans ; Immunologic Deficiency Syndromes ; complications ; genetics ; Lymphopenia ; Male ; Mutation ; Mutation, Missense ; Nephrotic Syndrome ; complications ; genetics ; Osteochondrodysplasias ; complications ; congenital ; genetics ; Polymorphism, Single Nucleotide ; Pulmonary Embolism ; complications ; genetics ; Renal Insufficiency
8.Relationship between the Nco I, Ava II polymorphism of low density lipoprotein receptor gene and atherosclerotic cerebral infarction.
Yang GUO ; Jinjin GUO ; Dongming ZHENG ; Lili PAN ; Qiang LI ; Gang RUAN
Chinese Journal of Medical Genetics 2002;19(3):209-212
OBJECTIVE To investigate the relationship between the Nco I, Ava II polymorphism of low density lipoprotein receptor (LDL-R) gene in patients with the occurrence of atherosclerotic cerebral infarction (ACI) among the Han nationality in Liaoning province. METHODS The polymerase chain reaction technique was used to study the polymorphisms of LDL-R gene and allele frequencies in 77 patients with ACI and in 113 age-matched Chinese healthy controls. The levels of the lipid and lipoproteins were also compared among the cases with ACI and the controls. RESULTS A(+) frequencies of LDL-R gene in healthy controls and ACI group were 0.230 and 0.125 respectively, while the N(+) frequencies of healthy control and ACI group was 0.667 and 0.662 respectively. In case of the coexistence of A(-) A(-) and N(+) N(+), the relative risk (RR) of ACI was 5.56(P<0.001), while the RR of the increase of serum levels TG, TC, LDL-C, LP(a) were 4.29, 7.67, 9.33 and 3.09(P<0.05), respectively. CONCLUSION The coexistence of A(-) A(-) and N(+) N(+) can affect the concentration of lipid and lipoprotein and is in close relationship with the occurrence of ACI.
Apolipoprotein A-I
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blood
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Apolipoproteins B
;
blood
;
Binding Sites
;
genetics
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Cerebral Infarction
;
blood
;
genetics
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Cholesterol
;
blood
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Cholesterol, LDL
;
blood
;
DNA
;
genetics
;
metabolism
;
Deoxyribonucleases, Type II Site-Specific
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metabolism
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Genotype
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Humans
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Intracranial Arteriosclerosis
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blood
;
genetics
;
Lipoproteins
;
blood
;
Receptors, LDL
;
genetics
;
Triglycerides
;
blood
9.Microsatellite DNA polymorphism of adrenomedullin gene and atherosclerotic cerebral infarction.
Guo-rong BI ; Hong HAI ; Li-juan BAI ; He-min ZHANG ; Hui-jie ZHOU
Chinese Journal of Medical Genetics 2007;24(5):579-581
OBJECTIVETo detect the correlation between the microsatellite DNA polymorphism of adrenomedullin(ADM) gene (repeated sequences of CA) and the atherosclerotic cerebral infarction (ACI).
METHODSWith PCR, ADM genotype was monitored from 189 normotensive subjects and 283 cerebral infarction patients. By using radioimmunoassay, their plasma ADM concentration was measured, so as the biochemical index.
RESULTSThe genotype distribution of ADM between the health control and ACI groups was significantly different, chi square was 28.732, P < 0.05. As one of the four alleles, including 11, 13, 14 and 19 alleles, the frequency of 19 allele in ACI groups was much higher than that in the health control group, chi square was 26.929, P < 0.05. However, there was no significant difference in plasma ADM concentration among the different genotypes of the ACI patients.
CONCLUSIONMicrosatellite DNA polymorphism of ADM gene may be associated with the genetic predisposition to ACI.
Adrenomedullin ; genetics ; Adult ; Aged ; Alleles ; Case-Control Studies ; Cerebral Infarction ; complications ; genetics ; Female ; Gene Frequency ; Genotype ; Humans ; Intracranial Arteriosclerosis ; complications ; genetics ; Male ; Microsatellite Repeats ; genetics ; Middle Aged ; Polymorphism, Genetic
10.Lecithin-cholesterol acyltransferase gene 608C/T polymorphism associated with atherosclerotic cerebral infarction.
Xiao-yan ZHU ; Hong-wei XU ; Rong-yao HOU ; Heng-fang LIU ; Bo XIAO ; Xiao-su YANG ; Qi-dong YANG ; Bei-sha TANG
Chinese Journal of Medical Genetics 2006;23(4):419-422
OBJECTIVETo explore the distribution of lecithin-cholesterol acyltransferase gene (LCAT) 608C/T polymorphism in Chinese Han population and the relationship of the polymorphism association with the occurrence of atherosclerotic cerebral infarction.
METHODSThe lecithin:cholesterol acyltransferase gene 608C/T polymorphism is identified by polymerase chain reaction (PCR), single-strand conformation polymorphism (SSCP)and restriction fragment length polymorphism (RFLP) in 150 patients with ACI and 122 healthy controls matching age and sex.
RESULTSThe distribution of LCAT 608C/T gene polymorphism was in accordance with Hardy-Weinberg equilibrium. The CT genotype frequency (14.0%) and T allele frequency (7.0%) in ACI group were significantly higher than those in control group (P<0.05). The concentration of high density lipoprotein cholesterol (HDL-C) in 608CC subgroups were significantly higher than those in 608CT subgroups both in ACI group and in control group (P<0.05).
CONCLUSIONThe LCAT 608C/T polymorphism is possibly a predisposing factor in ACI happening of Chinese Han population. T allele frequency is possibly concerned with the metabolism of HDL-C.
Aged ; Alleles ; Cerebral Infarction ; etiology ; genetics ; Female ; Gene Frequency ; Genotype ; Humans ; Intracranial Arteriosclerosis ; complications ; Male ; Middle Aged ; Phosphatidylcholine-Sterol O-Acyltransferase ; genetics ; Polymerase Chain Reaction ; Polymorphism, Restriction Fragment Length ; Polymorphism, Single Nucleotide ; Polymorphism, Single-Stranded Conformational ; genetics