1.Hypermethylation Analysis of p16INK4a and p15INK4b Promoters in Chronic Lymphocytic Leukaemia Patients and Normal Individuals
The International Medical Journal Malaysia 2019;18(1):35-44
Introduction: Chronic Lymphocytic Leukaemia (CLL) is a common type of leukaemia in persons of
predominantly European descent but is rare in the Asian population. Disparities in CLL incidence among
people of Asian and European descent may be related to the genetic make-up of the two different
populations. Hypermethylation event might be one of the silencing mechanisms that inactivate the tumour
suppressor genes in CLL. The aim of this study was to determine the hypermethylation status of p16INK4a and
p15INK4b among CLL patients and normal individuals. Materials & Methods: A total of 25 CLL patients and 25
normal individuals were recruited for this study and their genomic DNA were extracted from the peripheral
blood. The hypermethylation status of p16INK4a and p15INK4b were determined using Methylation Specific-PCR
(MS-PCR) whereas DNA sequencing method was applied to selected samples for validation of the MS-PCR
results. We also evaluated the association between hypermethylation of these genes with the clinical and
demographic characteristics of each group of subjects. Results: Among the CLL patients, p15INK4b partialmethylation occurred in 6 (24%) subjects while methylation occurred in 1 (4%) subject. All the remaining
patients were unmethylated at p15INK4b. All the samples showed unmethylation at p16INK4a. Statistically
significant associations were found between p15INK4b hypermethylation with the presence of CLL (p=0.01) and
with race (p=0.02). Conclusion: Further study using a larger sample size is warranted to explore the
significance of DNA methylation incidence among the CLL patients of the Malaysian population. Hence, we
suggest that hypermethylation at p15INK4b has a huge influence that kick-starts CLL disease among Malaysians
and MS-PCR technique is applicable to be used in methylation study.
2.Bone Mineral Density in Patients with Pediatric Inflammatory Bowel Disease Using Dual Energy X-Ray Absorptiometry
Hasan M. ISA ; Amira A. EZZALDIN ; Mohamed M. ALABBASI ; Noora H. ALAAZMI ; Abdulrahman S. MASOOD ; Hissa M. ALABBASI
Journal of Bone Metabolism 2023;30(1):59-68
Background:
Inflammatory bowel disease (IBD) is a chronic inflammatory immune-mediated condition that affects the gastrointestinal system and alters bone growth and bone mineral density (BMD). Here we aimed to study the prevalence and predictors of a low BMD in pediatric patients with IBD.
Methods:
This retrospective cross-sectional analytical study included pediatric patients with IBD in whom BMD was evaluated using dual energy X-ray absorptiometry of the total body and lumbar spine. Osteoporosis was defined as a BMD Z-score ≤-2, osteopenia as -2 to -1, and normal as >-1. Clinical and laboratory findings were compared between patients with and without osteoporosis.
Results:
Of the 48 patients, 30 (62.5%) were males, 35 (72.9%) had Crohn’s disease, and 13 (27.1%) had ulcerative colitis. The mean age at diagnosis was 9.9±2.8 years. The median age at the time of the BMD scans was 11.9 (interquartile range, 9.9–14.3) years. Total body BMD scans identified 13 (27.1%) and 16 (33.3%) patients with osteoporosis and osteopenia, respectively. Spinal BMD scans revealed that 17 (39.5%) and 14 (32.6%) patients had osteoporosis and osteopenia, respectively. A low body mass index (BMI) Z-score (p=0.038), ileocolonic disease location (p=0.008), and a low calcium level (p=0.008) were significant predictors of osteoporosis on the total body BMD scans. A low BMI Z-score (p=0.039), decreased hemoglobin level (p=0.018), low calcium level (p=0.033), and infliximab use (p=0.019) were significant predictors of osteoporosis on the spinal BMD scans.
Conclusions
This study showed a high prevalence of low BMD among pediatric patients with IBD. A low BMI, ileocolonic disease location, low hemoglobin and calcium levels, and infliximab use were significantly associated with osteoporosis.
3.An assessment of the acetone extract from the leaves of Canarium odontophyllum (Miq.) for antibacterial activity against methicillin-resistant Staphylococcus aureus (MRSA)
Nur Amira Mohd Shamsuddin ; Noraziah M Zin ; Dayang Fredalina Basri
Malaysian Journal of Microbiology 2018;14(6):601-605
Abstract
Methicillin-resistant Staphylococcus aureus (MRSA) causes nosocomial and community infections and is a global health concern. This study evaluated the antibacterial activity of acetone extract from Canarium odontophyllum leaves against MRSA ATCC 33591 and Mu50 strains. The MIC/MBC ratio, determined using the broth micro dilution method, revealed the bacteriostatic effect of the extract against both strains. Time-kill assay against the Mu50 strain showed that the extract inhibited the growth of MRSA at low concentration but exhibited a concentration-dependent bacterial killing effect at 4× MIC. These findings confirm that an acetone extract from C. odontophyllum leaves inhibited growth of MRSA at low concentrations and could be utilised as an alternative anti-MRSA agent.
4.Phytotherapeutic effects of Echinacea purpurea in gamma-irradiated mice.
Amira M ABOUELELLA ; Yasser E SHAHEIN ; Sameh S TAWFIK ; Ahmed M ZAHRAN
Journal of Veterinary Science 2007;8(4):341-351
Echinacea (E.) purpurea herb is commonly known as the purple coneflower, red sunflower and rudbeckia. In this paper, we report the curative efficacy of an Echinacea extract in gamma-irradiated mice. E. purpurea was given to male mice that were divided into five groups (control, treated, irradiated, treated before irradiation & treated after irradiation) at a dose of 30 mg/kg body weight for 2 weeks before and after irradiation with 3 Gy of gamma-rays. The results reflected the detrimental reduction effects of gamma-rays on peripheral blood hemoglobin and the levels of red blood cells, differential white blood cells, and bone marrow cells. The thiobarbituric acid-reactive substances (TBARs) level, Superoxide dismutase (SOD) and glutathione peroxidase (GSPx) activities and DNA fragmentation were also investigated. FT-Raman spectroscopy was used to explore the structural changes in liver tissues. Significant changes were observed in the microenvironment of the major constituents, including tyrosine and protein secondary structures. E. purpurea administration significantly ameliorated all estimated parameters. The radio-protection effectiveness was similar to the radio-recovery curativeness in comparison to the control group in most of the tested parameters. The radio-protection efficiency was greater than the radio-recovery in hemoglobin level during the first two weeks, in lymphoid cell count and TBARs level at the fourth week and in SOD activity during the first two weeks, as compared to the levels of these parameters in the control group.
Animals
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Antioxidants/isolation & purification/*pharmacology
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Blood Cell Count
;
DNA Fragmentation/drug effects
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Echinacea/*chemistry
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Erythrocytes/drug effects/radiation effects
;
*Gamma Rays
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Glutathione Peroxidase/metabolism
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Leukocytes/drug effects/radiation effects
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Lipid Peroxidation/drug effects
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Liver/*drug effects/enzymology/radiation effects
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Male
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Mice
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*Phytotherapy
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Plant Extracts/*pharmacology
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Radiation-Protective Agents/isolation & purification/pharmacology
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Random Allocation
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Superoxide Dismutase/metabolism
5.Purification and characterization of two larval glycoproteins from the cattle tick, Boophilus annulatus.
Amr E EL HAKIM ; Yasser E SHAHEIN ; Amira M ABOUELELLA ; Mohamed E SELIM
Journal of Veterinary Science 2007;8(2):175-180
The present study was conducted to identify new target immunogenic molecules from the larval stage of the cattle tick, Boophilus annulatus (Acari: Ixodidae). Two specific larval glycoproteins (GLPs) were isolated by two-step affinity chromatography. The larval immunogens were first purified with CNBr-Sepharose coupled to rabbit anti-larval immunoglobulins, and the glycoproteins were then purified with Con-A Sepharose. These glycoproteins have molecular weights of approximately 32 and 15 kDa with isoelectric points between 6.8 and 7.2. Antibodies against the two GLPs, labeled I and II, were detected in the anti-whole tick, -whole larval, and -gut antigens through immunoblot analysis. These results suggest that these GLPs are good immunogens and can be useful in the vaccination of cattle against tick infestation.
Amino Acid Sequence
;
Animals
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Cattle
;
Cattle Diseases/immunology/*parasitology/prevention & control
;
Chromatography, Affinity
;
Electrophoresis, Polyacrylamide Gel
;
Glycoproteins/immunology/*isolation & purification
;
Immunoblotting
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Isoelectric Focusing
;
Ixodidae/chemistry/*immunology
;
Male
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Molecular Weight
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Rabbits
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Sequence Analysis, Protein
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Tick Infestations/immunology/parasitology/prevention & control/*veterinary
6.Role of Krebs von den Lungen-6 (KL-6) in Assessing Hypersensitivity Pneumonitis
Amira Ismail MOSTAFA ; Ayman Elsayed SALEM ; Heba Allah Moussa AHMED ; Aml Ibrahim BAYOUMI ; Radwa M. Abdel HALIM ; Rasha M. Abdel SAMIE
Tuberculosis and Respiratory Diseases 2021;84(3):200-208
Background:
Hypersensitivity pneumonitis (HP) is an increasingly recognized form of diffuse parenchymal lung disease. Krebs von den Lungen-6 (KL-6) is now classified as a human MUC1 mucin protein, and regenerating type II pneumocytes are the primary cellular source of KL-6/MUC1 in the affected lungs of patients with interstitial lung diseases (ILD). Serum KL-6/MUC1 levels have been demonstrated to be useful for the evaluation of various ILD. To determine the role of circulating KL-6 in evaluating the disease activity and management of HP.
Methods:
An observational cross-sectional study was conducted on 51 patients with HP and 20 healthy controls. Serum KL-6 levels were measured in both groups. Patients were further assessed based on chest high-resolution computed tomography (HRCT), pulmonary function test, 6-minute walk test, echocardiography, bronchioalveolar lavage, and/or transbronchial biopsy. Patients were divided into the fibrotic and non-fibrotic groups according to the HRCT findings.
Results:
The median serum KL-6 levels were significantly higher in HP patients as compared to the control group. The median serum KL-6 levels were found to be higher in the non-fibrotic HP group (1,900 IU/mL) as compared to the fibrotic group (1,200 IU/mL). There was a significant inverse correlation between serum KL-6 serum level and the dose of steroids as well as the duration of steroid therapy.
Conclusion
The presence of higher KL-6 levels in the non-fibrotic HP group implies its enhanced production by regenerating pneumocytes in response to alveolar injury. The significant association between serum KL-6 levels and the dose and the duration of steroid therapy emphasizes the significant role of steroids in the stabilization of the disease.
7.Role of Krebs von den Lungen-6 (KL-6) in Assessing Hypersensitivity Pneumonitis
Amira Ismail MOSTAFA ; Ayman Elsayed SALEM ; Heba Allah Moussa AHMED ; Aml Ibrahim BAYOUMI ; Radwa M. Abdel HALIM ; Rasha M. Abdel SAMIE
Tuberculosis and Respiratory Diseases 2021;84(3):200-208
Background:
Hypersensitivity pneumonitis (HP) is an increasingly recognized form of diffuse parenchymal lung disease. Krebs von den Lungen-6 (KL-6) is now classified as a human MUC1 mucin protein, and regenerating type II pneumocytes are the primary cellular source of KL-6/MUC1 in the affected lungs of patients with interstitial lung diseases (ILD). Serum KL-6/MUC1 levels have been demonstrated to be useful for the evaluation of various ILD. To determine the role of circulating KL-6 in evaluating the disease activity and management of HP.
Methods:
An observational cross-sectional study was conducted on 51 patients with HP and 20 healthy controls. Serum KL-6 levels were measured in both groups. Patients were further assessed based on chest high-resolution computed tomography (HRCT), pulmonary function test, 6-minute walk test, echocardiography, bronchioalveolar lavage, and/or transbronchial biopsy. Patients were divided into the fibrotic and non-fibrotic groups according to the HRCT findings.
Results:
The median serum KL-6 levels were significantly higher in HP patients as compared to the control group. The median serum KL-6 levels were found to be higher in the non-fibrotic HP group (1,900 IU/mL) as compared to the fibrotic group (1,200 IU/mL). There was a significant inverse correlation between serum KL-6 serum level and the dose of steroids as well as the duration of steroid therapy.
Conclusion
The presence of higher KL-6 levels in the non-fibrotic HP group implies its enhanced production by regenerating pneumocytes in response to alveolar injury. The significant association between serum KL-6 levels and the dose and the duration of steroid therapy emphasizes the significant role of steroids in the stabilization of the disease.
8.Evaluation of glycoproteins purified from adult and larval camel ticks (Hyalomma dromedarii) as a candidate vaccine.
Amr E EL HAKIM ; Yasser E SHAHEIN ; Sobhy ABDEL-SHAFY ; Amira M K ABOUELELLA ; Ragaa R HAMED
Journal of Veterinary Science 2011;12(3):243-249
In order to identify antigens that can help prevent camel tick infestations, three major glycoproteins (GLPs) about 97, 66 and 40 kDa in size were purified from adult and larval Egyptian ticks, Hyalomma (H.) dromedarii, using a single-step purification method with Con-A sepharose. The purified GLPs were evaluated as vaccines against camel tick infestation in rabbits. The rabbits received three intramuscular inoculations of GLPs (20 microg/animal) on days 0, 14, and 28. In the immunoblot analysis, Sera from the immunized rabbits recognized the native GLPs and other proteins from larval and adult H. dromedarii ticks along with those from other tick species such as Rhipicephalus sanguineus but not Ornithodoros moubata. The effects of immunity induced by these GLPs were determined by exposing rabbits to adult H. dromedarii ticks. These results demonstrated that GLP immunization led to a slightly decreased reproductive index and significantly reduced rates of egg hatchability. These results demonstrated that immunization with the purified GLPs can provide protection against infestation by H. dromedarii and some other tick species. Further studies are needed to confirm the effectiveness of immunization with GLPs against other tick species.
Animals
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Antigens/immunology/isolation & purification
;
Argasidae/immunology
;
Chromatography, Affinity/veterinary
;
Electrophoresis, Polyacrylamide Gel/veterinary
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Female
;
Glycoproteins/*immunology/isolation & purification
;
Immunoblotting/veterinary
;
Injections, Intramuscular/veterinary
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Ixodidae/growth & development/*immunology
;
Life Cycle Stages
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Male
;
Rabbits/*immunology/parasitology
;
Reproduction
;
Species Specificity
;
Tick Infestations/immunology/prevention & control/*veterinary
9.The Therapeutic Potential of Amniotic Fluid-Derived Stem Cells on Busulfan-Induced Azoospermia in Adult Rats
Heba F. IBRAHIM ; Safinaz H. SAFWAT ; Teshreen M. ZEITOUN ; Khaled F. EL MULLA ; Amira Y. MEDWAR
Tissue Engineering and Regenerative Medicine 2021;18(2):279-295
BACKGROUND:
Busulfan is an alkylating chemotherapeutic agent that is routinely prescribed for leukemic patients to induce myelo-ablation. However, it also results in azoospermia and infertility in cancer survivors. This research was constructed to explore the possible therapeutic role of amniotic fluid-derived stem cells (AFSCs) in improving busulfaninduced azoospermia in adult rats.
METHODS:
Forty two adult male albino rats were randomized into: (1) control group, (2) azoospermia group, (3) spontaneous recovery group, and (4) AFSCs-treated group, in which AFSCs were transplanted through their injection into the testicular efferent ducts. The assessment included a histo-pathological examination of the seminiferous tubules by the light and transmission electron microscopes. Additionally, the confocal laser scanning microscope was used for confirmation of homing of the implanted cells. Moreover, we conducted an immuno-fluorescence study for detection of the proliferating cell nuclear antigen (PCNA) in the spermatogenic cells, epididymal sperm count, and a histo-morphometric study.
RESULTS:
AFSCs successfully homed over the basement membrane of the injured seminiferous tubules. They greatly attenuated busulfan-induced degenerative and oxidative changes. They also caused a re-expression of PCNA in the germ cells, leading to resumption of spermatogenesis and re-appearance of spermatozoa.
CONCLUSION
AFSCs could be a promising treatment modality for male infertility induced by chemotherapy, as they possess prominent regenerative, anti-apoptotic, and anti-inflammatory potentials.
10.The Therapeutic Potential of Amniotic Fluid-Derived Stem Cells on Busulfan-Induced Azoospermia in Adult Rats
Heba F. IBRAHIM ; Safinaz H. SAFWAT ; Teshreen M. ZEITOUN ; Khaled F. EL MULLA ; Amira Y. MEDWAR
Tissue Engineering and Regenerative Medicine 2021;18(2):279-295
BACKGROUND:
Busulfan is an alkylating chemotherapeutic agent that is routinely prescribed for leukemic patients to induce myelo-ablation. However, it also results in azoospermia and infertility in cancer survivors. This research was constructed to explore the possible therapeutic role of amniotic fluid-derived stem cells (AFSCs) in improving busulfaninduced azoospermia in adult rats.
METHODS:
Forty two adult male albino rats were randomized into: (1) control group, (2) azoospermia group, (3) spontaneous recovery group, and (4) AFSCs-treated group, in which AFSCs were transplanted through their injection into the testicular efferent ducts. The assessment included a histo-pathological examination of the seminiferous tubules by the light and transmission electron microscopes. Additionally, the confocal laser scanning microscope was used for confirmation of homing of the implanted cells. Moreover, we conducted an immuno-fluorescence study for detection of the proliferating cell nuclear antigen (PCNA) in the spermatogenic cells, epididymal sperm count, and a histo-morphometric study.
RESULTS:
AFSCs successfully homed over the basement membrane of the injured seminiferous tubules. They greatly attenuated busulfan-induced degenerative and oxidative changes. They also caused a re-expression of PCNA in the germ cells, leading to resumption of spermatogenesis and re-appearance of spermatozoa.
CONCLUSION
AFSCs could be a promising treatment modality for male infertility induced by chemotherapy, as they possess prominent regenerative, anti-apoptotic, and anti-inflammatory potentials.