1.Phylogenetic Analysis of Human Bocavirus in Hospitalized Children with Acute Respiratory Tract Infection in Korea.
Jong Gyun AHN ; Seong Yeol CHOI ; Dong Soo KIM ; Ki Hwan KIM
Korean Journal of Pediatric Infectious Diseases 2012;19(2):71-78
PURPOSE: Human bocavirus (hBoV), a recently discovered virus, has been detected in children with respiratory tract infections worldwide. The aim of this study was to analyze the frequency and molecular phylogeny of hBoV in the respiratory samples of children with acute respiratory tract infections in 2010. METHODS: Nasopharyngeal samples were collected from 953 children with lower respiratory tract infections at Severance children's hospital in Korea from January 2010 to December 2010. We applied the multiplex PCR technique for the identification of 12 respiratory viruses from the samples. Among the total specimens, hBoV positive samples were subjected to phylogenetic analysis by sequencing a fragment of the VP1/VP2 gene junction. RESULTS: hBoV was detected in 141 (14.8%) among 953 patients. The 61.7% of hBoV-positive samples were found to co-exist with other respiratory viruses. The results of phylogenetic analysis showed that all 141 hBoV-positive isolates were identified as hBoV 1, revealing a high similarity among the isolates (>98%). CONCLUSION: hBoV 1 with minimal sequence variations circulated in children with acute respiratory infections during 2010. More research is needed to determine the clinical severity and outcomes of the minimal sequence variations.
Child
;
Child, Hospitalized
;
Human bocavirus
;
Humans
;
Korea
;
Multiplex Polymerase Chain Reaction
;
Phylogeny
;
Respiratory System
;
Respiratory Tract Infections
;
Viruses
2.A Nationwide Survey on the Child Day Care and Common Infectious Diseases.
Jong Gyun AHN ; Seong Yeol CHOI ; Dong Soo KIM ; Ki Hwan KIM
Korean Journal of Pediatric Infectious Diseases 2012;19(1):19-27
PURPOSE: As the number of children who attend child care centers has increased, concerns has increased about the effect of child day care on childhood illness. This study was conducted to examine the relationship between experience in child care and common infectious diseases in children under 5 years of age. METHODS: Data were collected by surveying 1,000 respondents with children under age 5 through online interviews using a structured questionnaire. The contents of the survey were composed of demographic characteristics, child care facilities usage, experience in infectious diseases, and immunization status. RESULTS: Among the 1,000 children <5 years of age, 78.5% attended a child care facility. Rates of common communicable illnesses were higher in children in child care than for children reared exclusively at home. The predominant communicable diseases which the respondents' children experienced, in order of decreasing frequency, were gastroenteritis (47.1%), otitis media (41.8%) and pneumonia (19.1%). The immunization rate of vaccines that are not included the national immunization program (NIP) (Haemophilus influenzae type b vaccine - 76.6%, hepatitis A vaccine - 63.3%, pneumococcal vaccine - 59.4%, rotavirus vaccine - 43.1%) was lower than that of the NIP vaccines (90.4%). CONCLUSION: Children in child care experience more bouts of common infectious disease, so nationwide policies to prevent or to control the spread of infectious agents in a child-care should be available and appropriate immunization should be emphasized as the most effective method for the control of infectious disease for children.
Child
;
Child Care
;
Communicable Diseases
;
Surveys and Questionnaires
;
Day Care, Medical
;
Gastroenteritis
;
Hepatitis A Vaccines
;
Humans
;
Immunization
;
Immunization Programs
;
Influenza, Human
;
Otitis Media
;
Pneumonia
;
Rotavirus
;
Vaccination
;
Vaccines
3.Enhanced detection and serotyping of Streptococcus pneumoniae using multiplex polymerase chain reaction.
Jong Gyun AHN ; Seong Yeol CHOI ; Dong Soo KIM ; Ki Hwan KIM
Korean Journal of Pediatrics 2012;55(11):424-429
PURPOSE: Methods for quick and reliable detection of Streptococcus pneumoniae are needed for the diagnosis of pneumococcal disease and vaccine studies. This study aimed to show that sequential multiplex polymerase chain reaction (PCR) is more efficient than conventional culture in achieving S. pneumoniae-positive results. METHODS: Nasopharyngeal (NP) secretions were obtained from 842 pediatric patients admitted with lower respiratory infections at Severance Children's Hospital in Korea between March 2009 and June 2010. For identification and serotype determination of pneumococci from the NP secretions, the secretions were evaluated via multiplex PCR technique with 35 serotype-specific primers arranged in 8 multiplex PCR sets and conventional bacteriological culture technique. RESULTS: Among the results for 793 samples that underwent both bacterial culture and PCR analysis for pneumococcal detection, 153 (19.3%) results obtained by PCR and 81 (10.2%) results obtained by conventional culture technique were positive for S. pneumoniae. The predominant serotypes observed, in order of decreasing frequency, were 19A (23%), 6A/B (16%), 19F (11%), 15B/C (5%), 15A (5%), and 11A (4%); further, 26% of the isolates were non-typeable. CONCLUSION: As opposed to conventional bacteriological tests, PCR analysis can accurately and rapidly identify pneumococcal serotypes.
Culture Techniques
;
Humans
;
Korea
;
Multiplex Polymerase Chain Reaction
;
Pneumonia
;
Polymerase Chain Reaction
;
Respiratory Tract Infections
;
Serotyping
;
Streptococcus
;
Streptococcus pneumoniae
4.A Case of Lung Involvement Associated with Juvenile Idiopathic Arthritis.
Chung Mo KOO ; Seong Yeol CHOI ; Jong Gyun AHN ; Ki Hwan KIM ; Dong Soo KIM
Journal of Rheumatic Diseases 2013;20(5):332-335
Juvenile idiopathic arthritis (JIA) can develop extra-articular manifestations, including growth retardation, osteopenia and chronic uveitis. However, pleuropulmonary involvement is rare. Approximately 40% of patients with JIA have abnormal pulmonary function tests without pulmonary symptoms, with the commonest abnormality in carbon monoxide diffusing capacity, but clinically evident pulmonary parenchymal disease in JIA is extremely uncommon. We describe a 15-year-old male with JIA who presented with dyspnea due to interstitial lung disease.
Adolescent
;
Arthritis
;
Arthritis, Juvenile Rheumatoid*
;
Bone Diseases, Metabolic
;
Carbon Monoxide
;
Dyspnea
;
Humans
;
Lung Diseases
;
Lung Diseases, Interstitial
;
Lung*
;
Male
;
Respiratory Function Tests
;
Uveitis
5.Usefulness of Serum Cystatin C for the Evaluation of Renal Function in Diabetic Patient.
Sung Hyun LEE ; Gyun Yeol AHN ; Ok Yeon JEONG ; Young Jin PARK ; Sook Jin JANG ; Dae Soo MOON
The Korean Journal of Laboratory Medicine 2005;25(3):155-161
BACKGROUND: Diabetic nephropathy is the most frequent complication in patients with diabetes mellitus (DM). In clinical practice, the glomerular filtration rate (GFR) is often estimated from serum creatinine. Recently, serum cystatin C has been suggested being a better parameter for diagnosis of impaired renal function. We evaluated serum cystatin C as a potential new marker of GFR in diabetes patients. METHODS: Serum cystatin C and serum creatinine (sCr) were measured in 73 DM patients to evaluate their usefulness in diabetic patients. DM patients were divided into three groups (whole DM patients, albuminuric patients, and DM patients with sCr<1 mg/dL). Serum cystatin C and sCr were compared with creatinine clearance (CCr). RESULTS: The overall correlation coefficient for the reciprocal of serum cystatin C was superior to that of the reciprocal of serum creatinine in all three patient groups. With CCr cut-off values of 60 mL/min and 80 mL/min, receiver operating characteristic (ROC) plotting demonstrated that serum cystatin C had a higher sensitivity and specificity for detecting decreased GFR than did serum creatinine in all three patient groups. CONCLUSIONS: These findings suggest that serum cystatin C is superior to serum creatinine as a marker of GFR measured by correction or mean ROC-plot AUC in diabetic patients; therefore, serum cystatin C could be used for the early detection of the impairment of renal function.
Area Under Curve
;
Creatinine
;
Cystatin C*
;
Diabetes Mellitus
;
Diabetic Nephropathies
;
Diagnosis
;
Glomerular Filtration Rate
;
Humans
;
ROC Curve
;
Sensitivity and Specificity
6.Trends of the Species and Antimicrobial Susceptibility of Microorganisms Isolated from Blood Cultures of Patients.
Gyun Yeol AHN ; Sook jin JANG ; Sung Hyun LEE ; Ok Yeon JEONG ; Bidur Prasad CHAULAGAIN ; Dae Soo MOON ; Young Jin PARK
Korean Journal of Clinical Microbiology 2006;9(1):42-50
BACKGROUND: Blood culture is an important procedure for the determination of the etiologic agent of septicemia. Analysis of the blood culture results can provide clinicians with very important information for the empirical treatment of patients. METHODS: In this study the blood cuture results at Chosun University Hospital during the years 2002 to 2005 were analysed to determine the species and antimicrobial susceptibility of the isolates. Blood culture bottles were incubated in BACTEC 9240 blood culture system; the isolates were identified by Vitek II, and antimicrobial susceptibility was tested by Vitek II system or the NCCLS disk diffusion method. RESULTS: Positive blood cultures were obtained from 1,520 (18.5%) patients. Among the microorganisms isolated from blood culture, 97.0% were aerobic and facultative anaerobic bacteria and 2.8% were fungi. Frequently isolated organisms in decreasing order were coagulase-negative staphylococci (CNS), Escherichia coli, Staphylococus aureus, Stenotrophomonas maltophilia, Serratia marcescens, and Klebsiella pneumoniae. The proportion of Pseudomonas aeruginosa isolates resistant to ceftazidime and imipenem was increased during the study period. CONCLUSION: E. coli was the most frequent etiologic agent of bacteremia except CNS, common contaminants of skin, at Chosun University Hospital. It seems to be necessary to enhance infection control measures to cope with an increasing number of the resistant bacteria to various antibiotics.
Anti-Bacterial Agents
;
Bacteremia
;
Bacteria
;
Bacteria, Anaerobic
;
Ceftazidime
;
Diffusion
;
Escherichia coli
;
Fungi
;
Humans
;
Imipenem
;
Infection Control
;
Klebsiella pneumoniae
;
Pseudomonas aeruginosa
;
Sepsis
;
Serratia marcescens
;
Skin
;
Stenotrophomonas maltophilia
7.Pseudo-outbreak of Stenotrophomonas maltophilia Due to Contamination of Bronchoscope.
Gyun Yeol AHN ; Feng Nan YU ; Sook Jin JANG ; Dong Min KIM ; Geon PARK ; Dae Soo MOON ; Young Jin PARK
The Korean Journal of Laboratory Medicine 2007;27(3):205-209
BACKGROUND: We noticed an abrupt increase in the isolation of Stenotrophomonas maltophilia from bronchoalveolar lavage (BAL) specimens collected at Chosun University Hospital. We performed surveillance cultures in order to identify the source of what appeared to be a pseudo-outbreak. METHODS: To investigate a possible nosocomial outbreak of S. maltophilia, we performed culture of 11 environmental specimens obtained from a bronchoscopy room and two bronchoscopes. Pulsedfield gel electrophoresis (PFGE) was used to examine the genetic relatedness among the strains of S. maltophilia recovered from BAL specimens of 3 patients and 1 environmental sample, as well as 9 unrelated strains of S. maltophilia as a control. RESULTS: During a 7 day-period in March 2006, S. maltophilia was isolated from the BAL specimens of 7 of 13 (54%) patients, compared to only 5 of 188 (2.6%) patients during the 6-month period prior to that period. S. maltophilia was isolated from 1 of the 11 environmental samples, which was obtained from a fiberoptic bronchoscope suction channel. All 7 patient isolates and one environmental isolate exhibited similar antibiotic susceptibility patterns. PFGE analysis of the genomic DNA from epidemic strains demonstrated an identical banding pattern, whereas each of epidemiologically unrelated strains showed a unique electrophoretic pattern. CONCLUSIONS: Apparently one of the hospital bronchoscopes became contaminated with S. maltophilia during a bronchoscopic procedure. It is likely that subsequent specimen contamination occurred because the bronchoscope had been inadequately cleaned and disinfected. The pseudo-outbreak was controlled successfully by removing the source of infection.
Aged
;
Aged, 80 and over
;
Bronchoalveolar Lavage Fluid/microbiology
;
Bronchoscopes/*microbiology
;
*Disease Outbreaks
;
Electrophoresis, Gel, Pulsed-Field
;
*Equipment Contamination
;
Gram-Negative Bacterial Infections/diagnosis/*epidemiology/transmission
;
Humans
;
Male
;
Microbial Sensitivity Tests
;
Middle Aged
;
Stenotrophomonas maltophilia/*genetics/isolation & purification
8.Evaluation of the detectability of Vitek II System for Inducible Clindamycin Resistance in Staphylococci.
Sung Hyun LEE ; Sook Jin JANG ; Dae Soo MOON ; Young Jin PARK ; Gyun Yeol AHN ; Hu Lin HAN ; Bidur Prasad CHAULAGAIN ; Ok Yeon JEONG
The Korean Journal of Laboratory Medicine 2005;25(6):406-410
BACKGROUND: While broth based antimicrobial susceptibility test methods work well for the detection of the majority of antimicrobial resistance mechanisms, antimicrobial resistance mechanism in some microorganisms may not be detected by these methods. The purpose of this study was to compare Vitek II system with a standard method for the ability to detect inducible clindamycin resistance in Staphylococcus aureus. METHODS: Of 200 clinical isolates of S. aureus tested, 183 were methicillin resistant (MRSA) and 17 were methicillin susceptible (MSSA). A disk approximation test (Clinical Laboratory Standards Institute; CLSI, Wayne, PA, USA) was performed as the standard method by placing standard erythromycin and clindamycin disks in adjacent positions. Vitek II ID-GPI (bioMerieux, Durham, NC, USA) was used for identification and Vitek AST-P536 (bioMerieux, Durham, NC, USA) for antimicrobial susceptibility tests. RESULTS: Clindamycin resistance rates of S. aureus tested by disk diffusion and Vitek II system were 89% and 56%, respectively. All but one inducible clindamycin resistant MRSA isolates were susceptible to clindamycin by Vitek II system. Five inducible clindmycin resistant MSSA isolates were all susceptible to clindamycin by Vitek II system. Vitek II system did not detect the inducible clindamycin resistance in S. aureus. CONCLUSIONS: Our results showed that Vitek II system was unacceptable for the detection of inducible clindamycin resistance in S. aureus. We suggests that the disk approximation test should be used to detect the inducible clindamycin resistance in S. aureus.
Clindamycin*
;
Diffusion
;
Erythromycin
;
Methicillin
;
Methicillin Resistance
;
Methicillin-Resistant Staphylococcus aureus
;
Staphylococcus aureus
9.Current Practice of Transradial Coronary Angiography and Intervention: Results from the Korean Transradial Intervention Prospective Registry.
Young Jin YOUN ; Jun Won LEE ; Sung Gyun AHN ; Seung Hwan LEE ; Junghan YOON ; Byung Ryul CHO ; Sang Sig CHEONG ; Hee Yeol KIM ; Jae Hwan LEE ; Jang Ho BAE ; Jin Bae LEE ; Jon SUH ; Keum Soo PARK ; Kyoo Rok HAN ; Myung Ho JEONG ; Seung Woon RHA ; Sung Ho HER ; Yun Hyeong CHO ; Sang Wook KIM
Korean Circulation Journal 2015;45(6):457-468
BACKGROUND AND OBJECTIVES: Although increasing evidence has indicated that radial access is a beneficial technique, few studies have focused on Korean subjects. The aim of this study was to evaluate current practice of coronary angiography (CAG) and percutaneous coronary intervention (PCI) using radial access in South Korea. SUBJECTS AND METHODS: A total of 6338 subjects were analyzed from Korean Transradial Intervention prospective registry that was conducted at 20 centers in Korea. After evaluating the initial access, subjects intended for radial access were assessed for their baseline, procedure-related, and complication data. Subjects were categorized into three groups: group of overall subjects (n=5554); group of subjects who underwent PCI (n=1780); and group of subjects who underwent primary percutaneous coronary intervention (PPCI) (n=167). RESULTS: The rate of radial artery as an initial access and the rate of access site crossover was 87.6% and 4.4%, respectively, in overall subjects. Those rates were 82.4% and 8.1%, respectively, in subjects who underwent PCI, and 60.1% and 4.8%, respectively, in subjects who underwent PPCI. For subjects who underwent CAG, a 6-F introducer sheath and a 5-F angiographic catheter was the most commonly used. During PCI, a 6-F introducer sheath (90.6%) and a 6-F guiding catheter were standardly used. CONCLUSION: The large prospective registry allowed us to present the current practice of CAG and PCI using radial access. These data provides evidence to achieve consensus on radial access in CAG and PCI in the Korean population.
Catheters
;
Consensus
;
Coronary Angiography*
;
Korea
;
Percutaneous Coronary Intervention
;
Prospective Studies*
;
Radial Artery
;
Registries
10.Comparison of Clinical Characteristics of Patients with Rotavirus Gastroenteritis Relative to the Infecting Rotavirus G-P Genotype.
Sook Jin JANG ; Jung Oak KANG ; Dae Soo MOON ; Sung Hyun LEE ; Ahn Gyun YEOL ; Ok Yeon JEONG ; Hu Lin HAN ; Bidur Prasad CHAULAGAIN ; Seong Sig CHO ; Young Jin PARK
The Korean Journal of Laboratory Medicine 2006;26(2):86-92
BACKGROUND: Group A rotavirus is a major cause of severe diarrhea in children throughout the world. For the proper management of rotavirus infections, it will be helpful to know their clinical characteristics according to the G and P genotypes of the infecting virus. METHODS: The diarrheal stool specimens from patients hospitalized in Chosun University Hospital during 2002-2003 were tested for rotavirus by Dipstick 'Eiken' Rota kit. Rotavirus antigen-positive stool specimens were analyzed for group A rotavirus by RT-PCR, and the group A-positive PCR products were genotyped for P and G types by PCR. RESULTS: Among the 119 specimens analyzed for genotypes, the predominant strain was genotype G4P[6] (51.3%), followed by G2P[4] (19.3%), G1P[8] (7.6%), G3P[8] (5.0%), and G9P[8] (4.2%). To examine the characteristics of each rotavirus genotype, a clinico-epidemiological study was performed for 100 patients whose medical records were available. The frequencies of diarrhea, vomiting, dehydration, and fever; the rates of nosocomial infection and transfer from other hospitals; and the mean severity scores were significantly different among the patients infected with different types of rotavirus. Especially, patients with G4P[6] type were more likely than those infected with other genotypes to show the following distinct features: Most patients showed milder symptoms and were neonates transferred from other obstetric hospitals and 68.4% of the cases were nosocomial infection. G4P[6] strains were isolated almost all along the year. The mean severity scores of patients infected by G4P[6], G2P[4], G1P[8], G3P[8], and G9P[8] strains were 6.8, 9.5, 8.0, 9.0, and 10.8, respectively. CONCLUSIONS: Many features of rotavirus infections including the epidemic period, rate of nosocomial infection, age and severity of symptoms were different according to the genotypes of the infecting virus.
Child
;
Cross Infection
;
Dehydration
;
Diarrhea
;
Fever
;
Gastroenteritis*
;
Genotype*
;
Humans
;
Infant, Newborn
;
Medical Records
;
Polymerase Chain Reaction
;
Rotavirus Infections
;
Rotavirus*
;
Vomiting