1.Research progress in human adenovirus.
Wen-Juan GAO ; Yu JIN ; Zhao-Jun DUAN
Chinese Journal of Virology 2014;30(2):193-200
Human adenovirus (HAdV) is one of the most important pathogens in infants and young children with acute respiratory infections and other diseases. This article reviews the literature on HAdV, including its molecular biological characteristics, detection and typing, and pathogenic mechanism, the clinical features and epidemiological characteristics of HAdV-related diseases, and the prevention and control of HAdV infections. So far, 67 types of HAdV have been identified, including recombinant variants discovered in recent years. The major epidemic strains that cause acute respiratory infections are HAdV-3 and HAdV-7, both of which belong to the subgroup B. HAdV often leads to acute respiratory infections, but it also causes diseases of other systems. HAdV-related diseases have similar clinical manifestations as those caused by other respiratory viruses, but often accompanied by gastrointestinal symptoms. The pathogenic mechanism of HAdV remains unclear, especially for the new recombinant variants, due to few studies on their association with diseases. Because there are no prospective, large randomized controlled trials of HAdV infections, the treatment of HAdV infections is controversial. Vaccine is the most effective measure to reduce respiratory HAdV infections, but it is still not commercially available.
Adenovirus Infections, Human
;
virology
;
Adenoviruses, Human
;
classification
;
genetics
;
isolation & purification
;
physiology
;
Animals
;
Humans
2.Recent advance in new types of human adenovirus.
Chinese Journal of Virology 2013;29(3):342-348
Adenoviruses are double stranded DNA viruses that cause an array of diseases. More than 60 types of human adenovirus have been reported so far. The discovery and division of human adenovirus types 52-67 are based on the genomic sequencing and bioinformatic analysisy and different from the pre-existing 51 serotypes identified by traditional serological methods in composition and pathogenicity. The majority of new types of human adenovirus are homologous recombination within the same subgenus, and as a result, certain new serotypes acquire different pathogenicity. Recombination is a common evolutionary way for human adenovirus, however, the mechanism of recombination and potenital danger to human remain unknown. As new types of human adenovirus have been receiving increasing attention, in this review, the latest progress in new types of human adenovirus is summarized.
Adenovirus Infections, Human
;
virology
;
Adenoviruses, Human
;
classification
;
genetics
;
isolation & purification
;
physiology
;
Humans
;
Molecular Sequence Data
;
Phylogeny
3.Molecular and epidemiological study on viral diarrhea among infants in Lanzhou.
Xuan LUO ; Yu JIN ; Yu-ning LI ; Jin-song LI ; Wei-xia CHENG ; Ye-xia HAO ; Yong-xia WANG ; Shu-xian CUI ; Zhao-jun DUAN
Chinese Journal of Experimental and Clinical Virology 2011;25(1):36-38
OBJECTIVETo study the epidemiologic characteristics of viral diarrhea in children under 5 years old in Lanzhou, understand the four major virus in children of distribution.
METHODSIn the first hospital of Lanzhou university from Jul 2009 to Jun 2010,we collected 290 stool specimens from children with diarrhea and 114 asymptomatic controls. Rotavirus was detected by ELISA,further strain characterization was carried out by nested PCR. The human calicivirus, astrovirus, adenovirus were detected by RT-multiplex PCR and PCR.
RESULTSAt least one of the four viral agents was found in 60% of the specimens. Rotavirus, human calicivirus, adenovirus, and astrovirus were identified in 39.31%, 11.38%, 10.69%, and 4.83% in 290 specimens respectively. Rotavirus G3 was the most prevailing serotype, P [8] was the most common genotype. In the 114 control samples, 7 sample was positived for calicivirus, 5 samples were positived for human adenovirus and 1 sample was positived for astrovirus.
CONCLUSIONThe results indicated clearly the impact of viral agents causing diarrhea and the importance of long-term systematic surveillance.
Adenoviruses, Human ; isolation & purification ; Caliciviridae ; isolation & purification ; Child, Preschool ; China ; epidemiology ; Diarrhea ; epidemiology ; virology ; Female ; Humans ; Infant ; Male ; Mamastrovirus ; isolation & purification ; Rotavirus ; isolation & purification
4.Etiological and epidemiological study on viral diarrhea among children in Changchun.
Xian-E ZHANG ; Dan-Di LI ; Xiang LI ; Xian-Da YANG ; Kun CAI ; Yong-Xia WANG ; Li-Bin YANG ; Zhaojun DUAN
Chinese Journal of Experimental and Clinical Virology 2012;26(1):5-7
OBJECTIVETo study the pathogen and characteristics of viral diarrhea in children in Changchun area.
METHODS460 stools specimens were collected from children with acute diarrhea cured in the childrens, hospital of Changchun in 2010. Rotavirus were detected by ELISA, caliceverus and astrovirus were detected by reverse transcription-polymerase chain reactions (RT-PCR), adenovirus were detected by polymerase chain reactions (PCR).
RESULTSA total of 460 specimens were detected. The detection rate of rotavirus, caliceverus, astrovious, adenovious respectively is 35.22%, 20.43%, 9.78%, 3.70%, the detectablerate of mixed infection is 7.61%, children under 2 years old were the major patient. The main genotypes of the virus: rotavirus (G3P[8]), caliceverus (GII-4), astrovious (type I), adenovious (Ad41).
CONCLUSIONRotavirus is the main pathogen in Changchun. Followed by caliceverus, astrovious, adenovious.
Adenoviruses, Human ; isolation & purification ; Caliciviridae ; isolation & purification ; Child, Preschool ; China ; epidemiology ; Diarrhea ; epidemiology ; etiology ; Female ; Humans ; Infant ; Male ; Mamastrovirus ; isolation & purification ; Rotavirus ; isolation & purification ; Virus Diseases ; epidemiology ; etiology
5.Detection of Mycoplasma pneumoniae, Chlamydia trachomatis and common respiratory viruses in children with acute respiratory infection in Nanjing.
Qian CHEN ; Sheng-Yun SHI ; Zheng HU ; Qi-Hua ZHANG ; Xin CAO
Chinese Journal of Contemporary Pediatrics 2010;12(6):450-454
OBJECTIVETo investigate the nonbacterial pathogens in children with acute respiratory infection (ARI) in Nanjing.
METHODSThe presence of Mycoplasma pneumoniae (MP) and Chlamydia trachomatis (CT) was determined by quantitative PCR in the nasopharyngeal samples from 1 592 hospitalized children with ARI. Common respiratory viruses, including respiratory syncytial virus (RSV), adenovirus (ADV), influenza virus types A and B (IVA and IVB), parainfluenza virus types 1, 2, 3(PIV-1, 2, 3) and human metapneumovirus (hMPV), were detected using direct immunofluorescence assay.
RESULTSMP and CT were detected in 25.7% and 2.4% of the 1 592 samples respectively. The overall positive rate of respiratory viruses was 40.9%. Among the viruses, the top detected virus was RSV (61.3%), followed by PIV-3 (6.7%) and hMPV (4.9%). Mixed infection among MP, CT and viruses was observed in 107 cases (6.7%). The infants under 1 year old were susceptible to mix-infection (68/107, 63.6%).
CONCLUSIONSRespiratory virus is the main pathogen responsible for ARI in children from Nanjing. RSV is the most commonly identified virus. MP is also the frequently identified pathogen for ARI in children. Mixed infection is common in infants under 1 year old.
Adenoviruses, Human ; isolation & purification ; Adolescent ; Child ; Child, Preschool ; Chlamydia trachomatis ; isolation & purification ; Female ; Humans ; Infant ; Infant, Newborn ; Male ; Metapneumovirus ; isolation & purification ; Mycoplasma pneumoniae ; isolation & purification ; Orthomyxoviridae ; isolation & purification ; Respiratory Syncytial Virus, Human ; isolation & purification ; Respiratory Tract Infections ; microbiology ; virology
6.Virus detection in bronchoalveolar lavage fluid of 122 children with severe pneumonia.
Le-Yun XIE ; Li-Li ZHONG ; Bing ZHANG ; Zhao-Jun DUAN ; Zhi-Ping XIE ; Han-Chun GAO ; Qian-Qian CHEN ; Zhong-Hua DENG ; Lin LIN ; Xiao-Qian GAO ; Ni-Guang XIAO
Chinese Journal of Experimental and Clinical Virology 2013;27(2):95-97
OBJECTIVETo investigate the prevalence of viral pathogen in children with severe pneumonia in Hunan.
METHODBronchoalveolar lavage fluid [BALF] were collected from 122 hospitalized children with severe pneumonia in People's Hospital of Hunan province from January 2011 to December 2011. Nested- or reverse transcription Polymerase chain reaction (PCR or RT-PCR) was used to screen Adenovirus (ADV), Human Bocavirus (HBoV), Parainfluenzaviruses1-4 (PIV1-4), Human Respiratory Syneytial virus (RSV), Influenza virus A (IFVA), Influenza virus B (IFVB), Human Rhinovirus(HRV), Human Metapneumovirus (HMPV), human coronaviruses NL63 and HKU1 (HCoV-NL63, HCoV- HKU1).
RESULTSAmong the 122 bronchoalveolar lavage fluid, viral agents were detected in 60 samples(49.1%), among which ADV (40.98%) was the most common virus, followed by RSV (7.37%) and HBoV (7.37%). Two viruses were detected in 21 individual (35%) samples, of which 20 were dual positive for ADV (40%).
CONCLUSIONADV is the most frequently detected viral etiology of severe pneumonia in children in Hunan during this year. And its Coinfection with other respiratory viruses was common.
Adenoviruses, Human ; isolation & purification ; Adolescent ; Bronchoalveolar Lavage Fluid ; virology ; Child ; Child, Preschool ; Female ; Humans ; Infant ; Male ; Pneumonia ; virology ; Reverse Transcriptase Polymerase Chain Reaction ; Seasons ; Viruses ; isolation & purification
7.Identification and typing of adenovirus from acute respiratory infections in pediatric patients in Beijing from 2003 to 2012.
Jie DENG ; Yuan QIAN ; Lin-Qing ZHAO ; Ru-Nan ZHU ; Yu SUN ; Run TIAN
Chinese Journal of Virology 2013;29(6):615-620
Adenovirus (ADV) is one of the most common causes of acute respiratory infections for infants and children. The objective of this study was to understand the prevalence of ADV in acute respiratory infections in infants and children in Beijing and the types of the circulating ADVs. Clinical specimens were collected from patients with acute respiratory infections in a consecutive period of 10 years from Jan 2003 to Dec 2012. ADVs were detected from the collected clinical specimens by tissue culture and/or immunofluorescence assay and typed by nested-PCR based on the sequence of hexon gene for ADV types 3 and 7. For those strains which could not be typed by the nest-PCR, the gene fragment was amplified by a universal primer pair for all ADV types from group A to F and the PCR products were sequenced directly and analyzed with sequence comparison. Out of 39214 clinical specimens collected, including 7198 throat swabs from outpatients and 32016 nasopharyngeal aspirates from hospitalized patients, 884 were ADV positive by tissue culture and/or immunofluorescence assay, the overall positive rate was 2.25% (884/39214). The positive rate of ADV from the hospitalized was 2.08% (665/32016), while from the outpatients was 3.04% (219/7198). The ADV positive rate for year 2010 was 3.69%, which was the highest among the 10 years. The types of the ADVs were tested for 848 out of the 884 patients by using the nest-PCR and sequence analysis. It was showed that AD3 was the most prevalent with the rate of 53.18% (451/848), followed by AD7 36.79% (312/848), AD2 3.78% (32/848), AD55 2.24% (19/848), AD1 2.0% (17/848), AD5 0.94% (8/848), AD14 0.47% (4/848), AD6 0.35% (3/848) and AD4 0.24% (2/848). AD3 was the most predominant in most of the years among these 10 years, except 2012, 2003 and 2007. AD7 was the most predominant in 2012, and AD3 and AD7 were co-circulated in 2003 and 2007. Among 26 ADV infected severe pneumonia cases with pulmonary failure, 23 (88.5%) were AD7 positive, while 12 ADV associated tonsillitis, 11 (91.7%) were AD 3. The ADV positive rates from age groups 0-3 years were higher than age groups older than 4 years. The ratio for ADV positive males to females was 1.9 to 1. Adenovirus is still an important pathogen of acute respiratory infection in infants and young children. Most of the ADV associated acute respiratory infections in children in Beijing from 2003 to 2012 were AD3 and AD7. Most of the severe lower respiratory infections were associated with AD7. AD55 generated by recombination of AD11 and AD14 emerged in 2006.
Adenovirus Infections, Human
;
epidemiology
;
virology
;
Adenoviruses, Human
;
classification
;
genetics
;
isolation & purification
;
Adolescent
;
Child
;
Child, Preschool
;
China
;
epidemiology
;
Female
;
Humans
;
Infant
;
Male
;
Respiratory Tract Infections
;
epidemiology
;
virology
8.Viral etiology of acute respiratory infection in children from Wenzhou between 2007 and 2008.
Jie CHANG ; Chun-Yun LI ; Hai-Jing LI ; Yun-Chun LUO ; Xiao-Fang CHEN ; Shao-Yan YANG
Chinese Journal of Contemporary Pediatrics 2010;12(1):32-34
OBJECTIVETo study the viral etiology of acute respiratory infection (ARI)in children from Wenzhou, Zhejiang between 2007 and 2008.
METHODSThe nasopharyngeal aspirate samples were obtained from 5 097 hospitalized children with ARI. Seven common respiratory viruses, including respiratory syncytial virus (RSV), influenza virus A and B, parainfluenza viruses 1, 2 and 3 and adenovirus, were detected using direct immunofluorescence.
RESULTSViral agents were identified in 2 209 cases (43.3%).Of the 2 209, RSV was the most frequent (78.1%), followed by parainfluenza 3 (12.4%), influenza virus A (3.0%), adenovirus (2.8%), parainfluenza 1 (1.7%), influenza B (0.5%) and parainfluenza 2 (0.3%). The infants at ages of <3 months and <6 months had higher detection rate of viruses (53.6% and 49.2%, respectively). A highest detection rate of viruses was found in winter.
CONCLUSIONSRSV is the leading pathogen of ARI in children from Wenzhou, Zhejiang between 2007 and 2008. The children at age of less than 6 months are susceptible to respiratory viruses. The viral activity peaks in winter.
Acute Disease ; Adenoviruses, Human ; isolation & purification ; Adolescent ; Age Factors ; Child ; Child, Preschool ; Female ; Humans ; Infant ; Infant, Newborn ; Male ; Nasopharynx ; virology ; Orthomyxoviridae ; isolation & purification ; Respiratory Syncytial Virus, Human ; isolation & purification ; Respiratory Tract Infections ; virology ; Seasons ; Time Factors
9.Etiological study on cases with viral diarrhea in Ningxia during 2011.
Jun ZHAN ; Jiangtao MA ; Hui CHEN ; Fang YUAN ; Xuemin MA ; Xiang LIU ; Qiong HAO
Chinese Journal of Epidemiology 2014;35(6):729-732
OBJECTIVETo investigate the etiological characteristics of human rotavirus (HRV), human calicivirus (HuCV), human astrovirus (HAstV) and human enteral adenovirus (HAdV) in Ningxia province during 2011.
METHODSStool specimen was collected from acute diarrhea case of Ningxia during 2011. HRV was detected by ELISA and serotype/genotype identified on those RT-PCR positive specimens. HuCV, HAstV and HAdV were detected by RT-PCR.
RESULTSIn this study, a total of 690 specimens were detected, with the infection rates of HRV, HuCV, HAstV and HAdV as 2.17%, 21.74%, 3.19% and 6.52%, respectively. Co-infections were found in 4.20% of all the samples being tested. Among 15 HRV positive cases, serotypes G1, G3 and P[4] were the most predominant strains.
CONCLUSIONChildren who were under 2 years of age were the majority among patients infected by diarrhea viruses while HuCV was recognized as the main pathogen responsible for the viral diarrhea cases in Ningxia, 2011.
Adenoviruses, Human ; isolation & purification ; Adolescent ; Adult ; Aged ; Aged, 80 and over ; Caliciviridae ; isolation & purification ; Child ; Child, Preschool ; China ; epidemiology ; Diarrhea ; virology ; Humans ; Infant ; Infant, Newborn ; Mamastrovirus ; isolation & purification ; Middle Aged ; Rotavirus ; isolation & purification ; Young Adult
10.Molecular epidemiology of viral diarrhea in Chengdu infants and young children.
Xao-Li XIE ; Wei ZHANG ; Xue-Chun LIAO ; Xiao-Zhi DENG ; Li-Rong LIU ; Qi-Cheng ZHANG ; Li-Hong SHANG ; Yan WEN ; Ming REN
Chinese Journal of Experimental and Clinical Virology 2012;26(1):2-4
OBJECTIVETo investigated the molecular epidemiologic features of viral diarrhea in Chengdu infants and young children, and to establish baseline patterns of etiology, provides the scientific basis for the vaccine development and the epidemic situation control.
METHODSFrom March, 2006 to December, 2008, a total of 376 infants and young children from Chengdu area hospitalized for diarrhea in Chengdu Children's Hospital were enrolled in this study. The stool specimen collected from each patient was tested for rotavirus (RV), Calicivirus (CV), astrovirus (AstV) and adenovirus (Adv) by using enzyme linked immunosorbent assay (ELISA) and reverse transcription-polymerase chain reaction (RT-PCR) examination.
RESULTSAmong those 376 cases,there were 142 cases (37.76%) of RV infections,which scattered predominantly in October to December. Among 234 cases RV negativity,there were 29 cases HuCV infections (15.85%), 5 cases AstV infections (1.64%), and 8 cases Adv infections (2.04%).
CONCLUSIONRV appeared to be the main etiological agent of viral diarrhea in Chengdu infants and young children,the predominant serotype of RV were G3, P[8] and P[4],HuCV might be the important etiological agent besides RV.
Adenoviruses, Human ; genetics ; isolation & purification ; Caliciviridae ; genetics ; isolation & purification ; Child, Preschool ; China ; epidemiology ; Diarrhea ; epidemiology ; virology ; Female ; Genotype ; Humans ; Infant ; Infant, Newborn ; Male ; Mamastrovirus ; genetics ; isolation & purification ; Molecular Epidemiology ; Rotavirus ; genetics ; isolation & purification ; Virus Diseases ; epidemiology ; virology ; Viruses ; genetics