1.Currently Clinical Views on Genetics of Wilson's Disease.
Chen CHEN ; Bo SHEN ; Jia-Jia XIAO ; Rong WU ; Sarah Jane Duff CANNING ; Xiao-Ping WANG
Chinese Medical Journal 2015;128(13):1826-1830
OBJECTIVEThe objective of this study was to review the research on clinical genetics of Wilson's disease (WD).
DATA SOURCESWe searched documents from PubMed and Wanfang databases both in English and Chinese up to 2014 using the keywords WD in combination with genetic, ATP7B gene, gene mutation, genotype, phenotype.
STUDY SELECTIONPublications about the ATP7B gene and protein function associated with clinical features were selected.
RESULTSWilson's disease, also named hepatolenticular degeneration, is an autosomal recessive genetic disorder characterized by abnormal copper metabolism caused by mutations to the copper-transporting gene ATP7B. Decreased biliary copper excretion and reduced incorporation of copper into apoceruloplasmin caused by defunctionalization of ATP7B protein lead to accumulation of copper in many tissues and organs, including liver, brain, and cornea, finally resulting in liver disease and extrapyramidal symptoms. It is the most common genetic neurological disorder in the onset of adolescents, second to muscular dystrophy in China. Early diagnosis and medical therapy are of great significance for improving the prognosis of WD patients. However, diagnosis of this disease is usually difficult because of its complicated phenotypes. In the last 10 years, an increasing number of clinical studies have used molecular genetics techniques. Improved diagnosis and prediction of the progression of this disease at the molecular level will aid in the development of more individualized and effective interventions, which is a key to transition from molecular genetic research to the clinical study.
CONCLUSIONSClinical genetics studies are necessary to understand the mechanism underlying WD at the molecular level from the genotype to the phenotype. Clinical genetics research benefits newly emerging medical treatments including stem cell transplantation and gene therapy for WD patients.
Adenosine Triphosphatases ; genetics ; Cation Transport Proteins ; genetics ; Copper-transporting ATPases ; Hepatolenticular Degeneration ; genetics ; Humans ; Phenotype
2.Clinical signs and genetic sequencing of benign recurrent intrahepatic cholestasis.
Xing-Yu ZE ; Xin-Yan ZHAO ; Jun JIANG ; Ji-Dong JIA ; Tai-Ling WANG ; Bao-En WANG
Chinese Medical Journal 2013;126(24):4802-4803
Adenosine Triphosphatases
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genetics
;
Adolescent
;
Adult
;
Cholestasis, Intrahepatic
;
diagnosis
;
genetics
;
Chronic Disease
;
Female
;
Humans
;
Male
;
Young Adult
3.Advances of genetic research on the SPG4 gene.
Hua-rong YANG ; Yong QI ; Zhi SONG ; Hao DENG
Chinese Journal of Medical Genetics 2010;27(3):282-285
The hereditary spastic paraplegia (HSP), also known as Strumpell-Lorrain familial spasmodic paraplegia, is a highlighted clinical and genetic heterogeneity disorder with the prevalence of (2-9.6)/100,000. This disorder is characterized by progressive, usually severe spasticity and pyramidal weakness, predominantly in the lower limbs. Inheritance of this disease has been reported to be autosomal dominant (AD), autosomal recessive (AR), or X-linked recessive (XR), with the AD forms of HSP (ADHSP) being the most common type. At least 40 HSP gene loci have been localized and 19 genes have been identified. Forty percent of HSP cases are caused by mutations in the spastin (spastic paraplegia-4, SPG4) gene. Genetic diagnosis, the gold standard for diagnosis of the disease, may contribute to early diagnosis, presymptomatic diagnosis and prenatal diagnosis. The study of animal models plays an important role in revealing the molecular pathological mechanism of HSP. The known genetic research advances of the SPG4 gene are reviewed in this article.
Adenosine Triphosphatases
;
genetics
;
Animals
;
Humans
;
Spastic Paraplegia, Hereditary
;
diagnosis
;
genetics
;
pathology
;
Spastin
4.Clinical feature and ATP8B1 mutation analysis of a patient with progressive familial intrahepatic cholestasis type I.
Ying CHENG ; Li GUO ; Yuan-Zong SONG
Chinese Journal of Contemporary Pediatrics 2016;18(8):751-756
Progressive familial intrahepatic cholestasis type I (PFIC1) is an autosomal recessive disorder caused by biallelic mutations of ATP8B1 gene, with progressive cholestasis as the main clinical manifestation. This paper reports the clinical and genetic features of a PFIC1 patient definitely diagnosed by ATP8B1 genetic analysis. The patient, a boy aged 14 months, was referred to the hospital with the complaint of jaundiced skin and sclera over 10 months. The patient had been managed in different hospitals, but the therapeutic effects were unsatisfactory due to undetermined etiology. On physical examination, hepatosplenomegaly was discovered in addition to jaundice of the skin and sclera. The liver was palpable 4 cm below the right subcostal margin and 2 cm below the xiphoid while the spleen 2 cm below the left subcostal margin. The liver function test revealed elevated levels of serum total bile acids, bilirubin, and transaminases; however, the γ-glutamyl transferase level was normal. The diagnosis was genetic cholestasis of undetermined origin. At the age of 1 year and 8 months, a Roux-en-Y cholecystocolonic bypass operation was performed, and thereafter the jaundice disappeared. At 5 years and 1 month, via whole genome sequencing analysis and Sanger sequencing confirmation, the boy was found to be a homozygote of mutation c.2081T>A(p.I694N) of ATP8B1 gene, and thus PFIC1 was definitely diagnosed. The boy was followed up until he was 6 years, and jaundice did not recur, but the long-term outcome remains to be observed.
Adenosine Triphosphatases
;
genetics
;
Cholestasis, Intrahepatic
;
genetics
;
DNA Mutational Analysis
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Humans
;
Infant
;
Male
;
Mutation
;
Sequence Analysis, DNA
5.SMARCA2 deficiency in NSCLC: a clinicopathologic and immunohistochemical analysis of a large series from a single institution.
Shanshan SUN ; Qiujing LI ; Zhenkun ZHANG ; Sili XIONG ; Yujie ZHANG ; Qian LIU ; Zhe LI ; Fujun YANG ; Shukun ZHANG
Environmental Health and Preventive Medicine 2022;27(0):3-3
BACKGROUND:
SMARCA2 (SWI/SNF Related, Matrix Associated, Actin Dependent Regulator of Chromatin, Subfamily A, Member 2) is an important ATPase catalytic subunit in the switch-sucrose nonfermenting (SWI/SNF) complex. However, its relationship with the pathological features of NSCLC and its prognosis remain unclear.
METHODS:
We retrospectively reviewed 2390 patients with surgically resected NSCLC, constructed tissue microarrays (TMAs) and performed immunohistochemical assays. We analyzed the correlation of SAMRCA2 with clinicopathological features and evaluated its prognostic value.
RESULTS:
Among 2390 NSCLC cases, the negative expression ratios of SAMRCA2, SMARCA4, ARID1A, ARID1B and INI1 were 9.3%, 1.8%, 1.2%, 0.4% and 0%, respectively. In NSCLC, male sex, T3 and T4 stage, moderate and poor differentiation, tumor ≥ 2 cm, Ki67 ≥ 15%, SOX-2 negative expression, middle lobe lesion and adenocarcinoma were relative risk factors affecting SMARCA2-negative expression. In lung adenocarcinomas, high-grade nuclei, histological morphology of acinar and papillary, solid and micropapillary and TTF-1-negative expression were relative risk factors affecting SMARCA2-negative expression. Kaplan-Meier survival analysis showed that the OS was shorter in the SMARCA2-negative group. Multivariate survival analysis revealed that SMARCA2-negative expression was an independent factor correlated with a poor prognosis in NSCLC.
CONCLUSION
In conclusion, SMARCA2-negative expression is an independent predictor of a poor outcome of NSCLC and is a potential target for NSCLC treatment.
Adenosine Triphosphatases/metabolism*
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Carcinoma, Non-Small-Cell Lung/genetics*
;
Humans
;
Male
;
Retrospective Studies
;
Transcription Factors/genetics*
6.Progress in genetic research on familiar aneurysms.
Junyu LIU ; Junxia YAN ; Yifeng LI ; Weixi JIANG
Journal of Central South University(Medical Sciences) 2019;44(3):338-344
The subarachnoid hemorrhage (SAH) caused by ruptured intracranial aneurysms (IAs) is always a lethality. Increasing evidence suggests a familiar aggregation of IA occurrence, which may relate to genetics and there might be an increasing number of IAs in IA families when mutation of disease genes is aggregating. With the progress in the study of familiar intracranial aneurysms (FIAs), a large number of chromosome fragments are found to be related with IAs, such as 1p36, 5q31, 7q11, 14q22, 17cen, 19q13, Xp22. Further studies indicated that mutation of several genes could be the cause of FIAs, including TNFRSF13B, ANRIL, SOX17, ADAMTS15, RNF213 and LOXL2. The independent genetic epidemiologic study on aneurysm families can be used to discover the related genes more effectively, and to explore the mechanism of occurrence of IAs. It's also the precondition for the prevention of disease.
Adenosine Triphosphatases
;
Amino Acid Oxidoreductases
;
Genetic Research
;
Humans
;
Intracranial Aneurysm
;
genetics
;
Risk Factors
;
Ubiquitin-Protein Ligases
9.AAA ATPases and hereditary spastic paraplegia.
Chinese Journal of Medical Genetics 2009;26(3):298-301
The hereditary spastic paraplegias (HSPs or SPGs) are clinically and genetically highly heterogeneous neurodegenerative disorders mainly characterized by progressive spasticity and weakness in the lower limbs. The inheritance mode includes autosomal dominant(AD-HSP), autosomal recessive(AR-HSP) and X-linked recessive(XR-HSP). Thirty-five loci have been mapped with 17 disease-associated genes identified. SPG4 and SPG7 are the common subtypes in the AD-HSP and AR-HSP, respectively. The authors briefly review the function of spastin (SPG4) and paraplegin (SPG7), both of which belong to AAA ATPases family, and the recent progress of the study on the pathogenesis of HSPs.
Adenosine Triphosphatases
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genetics
;
Age of Onset
;
Chromosome Mapping
;
DNA Mutational Analysis
;
Genetic Heterogeneity
;
Genotype
;
Humans
;
Phenotype
;
Spastic Paraplegia, Hereditary
;
genetics
10.Structure and function of heavy metal transporter P(1B)-ATPase in plant: a review.
Yuxiu ZHANG ; Yuanya ZHANG ; Tao SUN ; Tuanyao CHAI
Chinese Journal of Biotechnology 2010;26(6):715-725
The regulation of the heavy-metal accumulation in vivo for plant survival is very complex. The metal cation transporter plays key roles in the metabolic process. P(1B)-ATPases are the only subgroup of P-ATPases that contribute to heavy metal homeostasis presented in most organisms. Arabidopsis thaliana contains eight genes encoding P(1B)-ATPases. The current reports show that the functions of P(1B)-ATPases are involved in maintaining metal homeostasis, transporting and detoxification in plants. P(1B)-ATPases not only mediated metal ion mobilization and uptake in roots, but also contribute to the metal transport, storage and tolerance in shoots, especially in heavy metal hyperaccumulators. In this paper, we reviewed and discussed the evolution, classification, structure and function of P(1B)-ATPases in plants. HMAs-transgenic manipulation could be a feasible approach for phytoremediation and mineral nutrition fortification.
Adenosine Triphosphatases
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genetics
;
metabolism
;
Biodegradation, Environmental
;
Biological Transport
;
physiology
;
Cation Transport Proteins
;
classification
;
genetics
;
metabolism
;
Metals, Heavy
;
metabolism
;
Plant Proteins
;
genetics
;
metabolism
;
Plants
;
enzymology
;
genetics
;
metabolism