1.A Case of Catheter-Related Bacteremia of Tsukamurella pulmonis.
Hyoeun Eun SHIM ; Heungsup SUNG ; Seung Mi BAEK ; Seung NAMGUNG ; Mi Na KIM ; Yong Gyun KIM ; Gyu Hyung LEE
The Korean Journal of Laboratory Medicine 2009;29(1):41-47
Tsukamurella pulmonis is an aerobic actinomycete. We report a catheter-related bacteremia of T. pulmonis. A 39 yr-old male with ALL was hospitalized to receive bone marrow transplantation (BMT). Although the patient developed a high fever at the 7th hospital day (HD), it subsided with vancomycin treatment, and he received BMT at 9th HD. Fever resurged at 16th HD despite sustained treatment with vancomycin, meropenem, and amphotericin B, but subsided with removal of Hickman catheter (HC) at 19th HD. Three sets of blood cultures comprising one from the HC and two from venipunctures were taken at 7th, 16th, and 19th HD, and the distal tip of the HC was also cultured. The aerobic vials of all 3 HC-withdrawn blood cultures and one peripheral blood culture taken at 19HD and the HC tip culture grew long, straight, thin gram-positive rods that were positive on modified Kinyoun stain. This organism showed tiny, rough, grey colonies after 3-day incubation and grew to large flat colonies when incubation was extended. It was catalase-positive, urease-positive, and alkaline-slant/alkaline-deep on triple sugar iron agar, and hydrolyzed hypoxanthine. The sequence of 1,296 base pairs of 16S rRNA of this organism showed a 100.0% homology with the published sequence of T. pulmonis DSM 44142T. To our knowledge, this is the first report of T. pulmonis bacteremia in Korea.
Actinomycetales/classification/genetics/isolation & purification
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Actinomycetales Infections/diagnosis/*microbiology/therapy
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Adult
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Bacteremia/*diagnosis/microbiology/therapy
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Bone Marrow Transplantation
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Catheter-Related Infections/*microbiology
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Humans
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Leukemia, Myeloid, Acute/therapy
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Male
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Phylogeny
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RNA, Ribosomal, 16S/genetics
2.Purification and characterization of a beta-D-xylosidase from Leifsonia shinshuensis DICP 16.
Hongwei LUAN ; Ying HU ; Xingbao LIU ; Dacheng HAO ; Ling YANG
Chinese Journal of Biotechnology 2008;24(5):867-873
A beta-D-xylosidase from Leifsonia shinshuensis DICP 16 was purified to apparent homogeneity using a combination of ammonium sulfate precipitation, DE 52 anion-exchange, Q-Sepharose Fast Flow anion-exchange, Toyopearl Butyl 650C hydrophobic-interaction and Sephacryl S-300 HR gel-permeation chromatography. The purified xylosidase consisted of two same subunits and had the relative molecular weight of 180 kD as determined by SDS-PAGE and gel-permeation chromatography. The maximal beta-D-xylosidase activity occurred at 55 degrees C and pH 7.0. It was stable at 45 degrees C and retained its original activity for 60 min. The stability declined rapidly when the temperature rose above 55 degrees C. The xylosidase was stable in the pH range from 6.0 to 11.0 for 20 h. At pH 7.0 and 45 degrees C the Km for p-nitrophenyl-beta-D-xylopyranoside (pNPX) was 1.04 mmol/L and the Vmx was 0.095 mmol nitrophenol/min/mg xylosidase. The enzyme was inhibited strongly by Fe2+ and Cu2+. It exhibited low levels of activity against other artificial substrates, compared to its activity against pNPX. When different natural xylosides were used as the substrates, the xylosidase showed distinct hydrolysis ability. It could hydrolyze 20-C, beta-(1-->6)-xyloside of ginsenoside Rb3 (G-Rb3) into ginsenoside Rd, but did not hydrolyze the other beta-D-glucosidic bonds of G-Rb3. Additionally, the xylosidase could not hydrolyze C-7 xylosyl-bearing taxanes.
Actinomycetales
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classification
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enzymology
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Amino Acid Sequence
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Culture Media
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Hydrogen-Ion Concentration
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Molecular Sequence Data
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Sequence Analysis, Protein
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Temperature
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Xylosidases
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chemistry
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genetics
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isolation & purification