2.Bacteremia Caused by Laribacter hongkongensis Misidentified as Acinetobacter lwoffii: Report of the First Case in Korea.
Dae Sik KIM ; Yu Mi WI ; Ji Young CHOI ; Kyong Ran PECK ; Jae Hoon SONG ; Kwan Soo KO
Journal of Korean Medical Science 2011;26(5):679-681
Laribacter hongkongensis is an emerging pathogen in patients with community-acquired gastroenteritis and traveler's diarrhea. We herein report a case of L. hongkongensis infection in a 24-yr-old male with liver cirrhosis complicated by Wilson's disease. He was admitted to a hospital with only abdominal distension. On day 6 following admission, he complained of abdominal pain and his body temperature reached 38.6degrees C. The results of peritoneal fluid evaluation revealed a leukocyte count of 1,180/microL (polymorphonuclear leukocyte 74%). Growth on blood culture was identified as a gram-negative bacillus. The isolate was initially identified as Acinetobacter lwoffii by conventional identification methods in the clinical microbiology laboratory, but was later identified as L. hongkongensis on the basis of molecular identification. The patient was successfully treated with cefotaxime. To the best of our knowledge, this case is the first report of hospital-acquired L. hongkongensis bacteremia with neutrophilic ascites.
Acinetobacter/isolation & purification
;
Acinetobacter Infections/complications/diagnosis/microbiology
;
Bacteremia/complications/*microbiology
;
Cefotaxime/therapeutic use
;
Diagnosis, Differential
;
Gastroenteritis/complications/*diagnosis/*microbiology
;
Hepatolenticular Degeneration/complications/microbiology
;
Humans
;
Liver Cirrhosis/complications/microbiology
;
Male
;
Neisseriaceae/*isolation & purification
;
Phylogeny
;
Republic of Korea
;
Young Adult
3.A case of fulminant community-acquired Acinetobacter baumannii pneumonia in Korea.
Yoon Jung OH ; Sung Heon SONG ; Seung Hee BAIK ; Hak Hyun LEE ; In Mee HAN ; Dong Hyun OH
The Korean Journal of Internal Medicine 2013;28(4):486-490
Acinetobacter baumannii (AB) is a common pathogen found in patients with hospital-acquired pneumonia all over the world. Community-acquired AB pneumonia, however, is very rare and has seldom been reported in Asia-Pacific countries. Community-acquired AB pneumonia has a fulminant course and is associated with a higher mortality than hospital-acquired AB pneumonia. In Korea, no case of fatal community-acquired AB pneumonia has been reported to date. Here, we describe the first fatal case of fulminant community-acquired AB pneumonia in Korea.
Acinetobacter Infections/diagnosis/*microbiology/therapy
;
Acinetobacter baumannii/*isolation & purification
;
Community-Acquired Infections/diagnosis/*microbiology/therapy
;
Disease Progression
;
Fatal Outcome
;
Humans
;
Male
;
Middle Aged
;
Republic of Korea
;
Time Factors
;
Treatment Failure
4.Modified CHROMagar Acinetobacter Medium for Direct Detection of Multidrug-Resistant Acinetobacter Strains in Nasal and Rectal Swab Samples.
Wonkeun SONG ; Jacob LEE ; Taek Kyung KIM ; Min Jeong PARK ; Han Sung KIM ; Jae Seok KIM
Annals of Laboratory Medicine 2013;33(3):193-195
This study aimed to investigate whether CHROMagar Acinetobacter medium (CHROMagar, France) in combination with an antimicrobial supplement (modified CHROMagar Acinetobacter; CHROMagar, France) can be used for detecting and isolating multidrug-resistant Acinetobacter species (MRA) in nasal and rectal surveillance cultures. Nasal and rectal swab samples were collected from patients in an intensive care unit at a teaching hospital. The samples were used to inoculate modified CHROMagar Acinetobacter plates, which were examined after 24 and 48 hr of incubation at 37degrees C. Their susceptibility against the antimicrobial agents meropenem, imipenem, ciprofloxacin, and amikacin was analyzed using the Etest (bioMerieux, France). A total of 406 paired samples (406 nasal swabs and 406 rectal swabs) were obtained from 226 patients, and 120 samples (28 nasal and 28 rectal cultures, 47 nasal cultures only, and 17 rectal cultures only) yielded MRA. Seventy-five MRA isolates (18.5%) were recovered from the 406 nasal samples, and 45 MRA isolates (11.1%) were recovered from the 406 rectal samples. Of the 120 MRA isolates, 3 (2.5%) were detected only after 48 hr of incubation. The use of modified CHROMagar Acinetobacter together with nasal and rectal swabs and 1-day incubation is an effective surveillance tool for detecting MRA colonization.
Acinetobacter/drug effects/*isolation & purification
;
Acinetobacter Infections/diagnosis/microbiology
;
Anti-Bacterial Agents/pharmacology
;
*Drug Resistance, Multiple, Bacterial/drug effects
;
Humans
;
Intensive Care Units
;
Microbial Sensitivity Tests
;
Nose/*microbiology
;
Reagent Kits, Diagnostic
;
Rectum/*microbiology
5.Modified CHROMagar Acinetobacter Medium for Direct Detection of Multidrug-Resistant Acinetobacter Strains in Nasal and Rectal Swab Samples.
Wonkeun SONG ; Jacob LEE ; Taek Kyung KIM ; Min Jeong PARK ; Han Sung KIM ; Jae Seok KIM
Annals of Laboratory Medicine 2013;33(3):193-195
This study aimed to investigate whether CHROMagar Acinetobacter medium (CHROMagar, France) in combination with an antimicrobial supplement (modified CHROMagar Acinetobacter; CHROMagar, France) can be used for detecting and isolating multidrug-resistant Acinetobacter species (MRA) in nasal and rectal surveillance cultures. Nasal and rectal swab samples were collected from patients in an intensive care unit at a teaching hospital. The samples were used to inoculate modified CHROMagar Acinetobacter plates, which were examined after 24 and 48 hr of incubation at 37degrees C. Their susceptibility against the antimicrobial agents meropenem, imipenem, ciprofloxacin, and amikacin was analyzed using the Etest (bioMerieux, France). A total of 406 paired samples (406 nasal swabs and 406 rectal swabs) were obtained from 226 patients, and 120 samples (28 nasal and 28 rectal cultures, 47 nasal cultures only, and 17 rectal cultures only) yielded MRA. Seventy-five MRA isolates (18.5%) were recovered from the 406 nasal samples, and 45 MRA isolates (11.1%) were recovered from the 406 rectal samples. Of the 120 MRA isolates, 3 (2.5%) were detected only after 48 hr of incubation. The use of modified CHROMagar Acinetobacter together with nasal and rectal swabs and 1-day incubation is an effective surveillance tool for detecting MRA colonization.
Acinetobacter/drug effects/*isolation & purification
;
Acinetobacter Infections/diagnosis/microbiology
;
Anti-Bacterial Agents/pharmacology
;
*Drug Resistance, Multiple, Bacterial/drug effects
;
Humans
;
Intensive Care Units
;
Microbial Sensitivity Tests
;
Nose/*microbiology
;
Reagent Kits, Diagnostic
;
Rectum/*microbiology
6.Evaluation of Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry-Based VITEK MS System for the Identification of Acinetobacter Species from Blood Cultures: Comparison with VITEK 2 and MicroScan Systems.
Seung Yeob LEE ; Jong Hee SHIN ; Soo Hyun KIM ; Myung Geun SHIN ; Soon Pal SUH ; Dong Wook RYANG
Annals of Laboratory Medicine 2015;35(1):62-68
BACKGROUND: Acinetobacter species are the leading cause of bloodstream infection (BSI), but their correct identification is challenging. We evaluated the matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS)-based VITEK MS (bioMerieux, France), and two automated systems, VITEK 2 (bioMerieux) and MicroScan (Siemens, USA) for identification of Acinetobacter BSI isolates. METHODS: A total of 187 BSI isolates recovered at a university hospital in Korea between 2010 and 2012 were analyzed. The identification results obtained using VITEK MS and two automated systems were compared with those of rpoB sequencing. RESULTS: Of 187 isolates analyzed, 176 were identified to the species level by rpoB sequencing: the Acinetobacter baumannii group (ABG; 101 A. baumannii, 43 A. nosocomialis, 10 A. pittii isolates) was most commonly identified (82.4%), followed by Acinetobacter genomic species 13BJ/14TU (5.3%), A. ursingii (2.1%), A. soli (2.1%), A. bereziniae (1.1%), and A. junii (1.1%). Correct identification rates to the species group (ABG) level or the species level was comparable among the three systems (VITEK MS, 90.3%; VITEK 2, 89.2%; MicroScan, 86.9%). However, VITEK MS generated fewer misidentifications (0.6%) than VITEK 2 (10.8%) and MicroScan (13.1%) (P<0.001). In addition, VITEK MS demonstrated higher specificity (100%) for discrimination between ABG and non-ABG isolates than the other systems (both, 31.8%) (P<0.001). CONCLUSIONS: The VITEK MS system is superior to the VITEK 2 and MicroScan systems for identification of Acinetobacter BSI isolates, with fewer misidentifications and better discrimination between the ABG and non-ABG isolates.
Acinetobacter/*genetics/isolation & purification
;
Acinetobacter Infections/diagnosis/microbiology
;
Bacterial Proteins/genetics
;
Bacterial Typing Techniques/*instrumentation/*methods
;
Blood/*microbiology
;
DNA, Bacterial/*analysis/metabolism
;
Databases, Genetic
;
Humans
;
*Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
7.The Causes and Treatment Outcomes of 91 Patients with Adult Nosocomial Meningitis.
Hye In KIM ; Shin Woo KIM ; Ga Young PARK ; Eu Gene KWON ; Hyo Hoon KIM ; Ju Young JEONG ; Hyun Ha CHANG ; Jong Myung LEE ; Neung Su KIM
The Korean Journal of Internal Medicine 2012;27(2):171-179
BACKGROUND/AIMS: Frequent pathogens of nosocomial meningitis were investigated and the adequacy of empiric antibiotic therapy was assessed. Outcomes of nosocomial meningitis were also evaluated. METHODS: Ninety-one patients, who were diagnosed and treated for nosocomial meningitis at a single tertiary hospital in Daegu, Korea for 10 years, were included. Medical record and electronic laboratory data on the causative pathogens, antibiotics used, and outcomes were retrospectively investigated. RESULTS: Coagulase-negative Staphylococcus (40.9%) was the most common pathogen, followed by Acinetobacter (32.5%). Both were cultured as a single organism in cerebrospinal fluid (CSF). Seventy-eight patients (85.7%) had infections related to external ventricular drains (EVD). The most common empirical antibiotics were extended-spectrum beta-lactam antibiotics plus vancomycin (35/91, 38.6%). Of the 27 patients who had cultured Acinetobacter in CSF, 10 (37%) were given the wrong empirical antibiotic treatment. Seven of the 27 patients (26.9%) with cultured Acinetobacter died, and overall mortality of the 91 patients was 16.5%. In the multivariate analysis, the presence of combined septic shock (p < 0.001) and a persistent EVD state (p = 0.021) were associated with a poor prognosis. CONCLUSIONS: Acinetobacter is one of the leading pathogens of nosocomial meningitis and may lead to inadequate coverage of empiric antibiotic therapy due to increasing resistance. An EVD should be removed early in cases of suspected nosocomial meningitis, and carbapenem might be required for the poor treatment response.
Acinetobacter/classification/*isolation & purification
;
Acinetobacter Infections/cerebrospinal fluid/diagnosis/*drug therapy/*microbiology
;
Adult
;
Aged
;
Aged, 80 and over
;
Anti-Bacterial Agents/*therapeutic use
;
Cerebrospinal Fluid/microbiology
;
Cross Infection/cerebrospinal fluid/diagnosis/*microbiology/mortality/*therapy
;
Drug Resistance, Bacterial
;
Female
;
Humans
;
Logistic Models
;
Male
;
Meningitis, Bacterial/cerebrospinal fluid/diagnosis/*drug therapy/*microbiology/mortality
;
Middle Aged
;
Multivariate Analysis
;
Odds Ratio
;
Republic of Korea
;
Retrospective Studies
;
Risk Assessment
;
Risk Factors
;
Staphylococcal Infections/cerebrospinal fluid/diagnosis/*drug therapy/*microbiology/mortality
;
Staphylococcus/classification/*isolation & purification
;
Time Factors
;
Treatment Outcome
;
Young Adult
8.Clinical manifestations of pneumonia according to the causative organism in patients in the intensive care unit.
Jung Kyu LEE ; Jinwoo LEE ; Young Sik PARK ; Chang Hoon LEE ; Jae Joon YIM ; Chul Gyu YOO ; Young Whan KIM ; Sung Koo HAN ; Sang Min LEE
The Korean Journal of Internal Medicine 2015;30(6):829-836
BACKGROUND/AIMS: Whether the causative organism influences the clinical course of pneumonia in the intensive care unit (ICU) is controversial. We assessed the clinical manifestations and prognosis of pneumonia according to the causative pathogens in patients in a medical ICU. METHODS: A retrospective observational study was performed in a medical ICU. Among 242 patients who were admitted to the ICU, 103 who were treated for pneumonia were analyzed. RESULTS: The causative pathogen was identified in 50 patients (49.0%); 22 patients (21.6%) had multidrug-resistant (MDR) pathogens. The distribution of causative micro-organisms was Staphylococcus aureus (20%), Pseudomonas species (16%), Klebsiella pneumoniae (14%), and Acinetobacter baumannii (12%). No significant difference in ICU mortality rate, duration of ICU stay, duration of mechanical ventilation, or frequencies of re-intubation and tracheostomy were detected based on the identification of any pathogen. In sub-analyses according to the pneumonia classification, the number of pathogens identified did not differ between pneumonia types, and a higher incidence of identified MDR pathogens was detected in the hospital-acquired pneumonia group than in the community-acquired or healthcare- acquired pneumonia groups. However, the clinical outcomes of pneumonia according to identification status and type of pathogen did not differ significantly between the groups. CONCLUSIONS: Neither the causative micro-organism nor the existence of MDR pathogens in critically ill patients with pneumonia was associated with the clinical outcome of pneumonia, including ICU mortality. This result was consistent regardless of the pneumonia classification.
Acinetobacter Infections/diagnosis/*microbiology/mortality/therapy
;
Aged
;
Anti-Bacterial Agents/therapeutic use
;
Critical Illness
;
Drug Resistance, Multiple, Bacterial
;
Female
;
Hospital Mortality
;
Humans
;
Intensive Care Units
;
Klebsiella Infections/diagnosis/*microbiology/mortality/therapy
;
Length of Stay
;
Male
;
Middle Aged
;
Pneumonia, Bacterial/diagnosis/*microbiology/mortality/therapy
;
Proportional Hazards Models
;
Pseudomonas Infections/diagnosis/*microbiology/mortality/therapy
;
Respiration, Artificial
;
Retrospective Studies
;
Risk Factors
;
Staphylococcal Infections/diagnosis/*microbiology/mortality/therapy
;
Time Factors
;
Tracheostomy
;
Treatment Outcome
9.Use of Delta Neutrophil Index for Differentiating Low-Grade Community-Acquired Pneumonia From Upper Respiratory Infection.
Hyunjung KIM ; Yonggoo KIM ; Kwan Hyoung KIM ; Chang Dong YEO ; Jin Woo KIM ; Hae Kyung LEE
Annals of Laboratory Medicine 2015;35(6):647-650
No abstract available.
Acinetobacter baumannii/isolation & purification
;
Adult
;
Aged
;
Aged, 80 and over
;
Area Under Curve
;
C-Reactive Protein/analysis
;
Community-Acquired Infections/*diagnosis/microbiology/pathology
;
Female
;
Humans
;
Klebsiella pneumoniae/isolation & purification
;
Leukocyte Count
;
Male
;
Middle Aged
;
Neutrophils/*cytology
;
Pneumonia/*diagnosis/microbiology/pathology
;
ROC Curve
;
Respiratory Tract Infections/*diagnosis/microbiology/pathology
;
Severity of Illness Index
;
Staphylococcus aureus/isolation & purification
;
Streptococcus pneumoniae/isolation & purification
10.Nosocomial Infection by Sequence Type 357 Multidrug-Resistant Acinetobacter baumannii Isolates in a Neonatal Intensive Care Unit in Daejeon, Korea.
Ji Youn SUNG ; Sun Hoe KOO ; Hye Hyun CHO ; Kye Chul KWON
Annals of Laboratory Medicine 2013;33(4):279-282
Acinetobacter baumannii is an important microorganism responsible for a number of nosocomial outbreaks, in particular, in intensive care units (ICUs). We investigated a nosocomial infection caused by multidrug-resistant (MDR) A. baumannii in a neonatal intensive care unit (NICU) in Korea. A. baumannii isolates were characterized using Etest (AB Biodisk, Sweden), two multiplex PCR assays, and multilocus sequence typing (MLST) scheme. PCR and PCR mapping experiments were performed for detecting and characterizing the determinants of antimicrobial resistance. Eight strains isolated from an NICU belonged to European (EU) clone II and revealed only one sequence type (ST), namely, ST357. All the isolates were susceptible to imipenem but were resistant to amikacin, gentamicin, ceftazidime, cefepime, and ciprofloxacin. To the best of our knowledge, this is the first report of a nosocomial infection in an NICU in Korea caused by ST357 MDR/carbapenem-susceptible A. baumannii strains. This result demonstrates that nosocomial outbreaks of MDR/carbapenem-susceptible strains as well as MDR/carbapenem-resistant isolates may occur in NICUs.
Acinetobacter Infections/diagnosis/*microbiology
;
Acinetobacter baumannii/drug effects/genetics/*isolation & purification/metabolism
;
Anti-Bacterial Agents/pharmacology
;
Bacterial Proteins/genetics
;
Cross Infection/*microbiology
;
DNA, Bacterial/analysis
;
*Drug Resistance, Multiple, Bacterial
;
Humans
;
Imipenem/pharmacology
;
Infant, Newborn
;
*Intensive Care Units, Neonatal
;
Microbial Sensitivity Tests
;
Multilocus Sequence Typing
;
Multiplex Polymerase Chain Reaction
;
Republic of Korea