1.PREVALENCE AND CHARACTERISTICS OF ESCHERICHIA COLI ISOLATES HARBOURING SHIGA TOXIN GENES (STX) FROM ACUTE DIARRHOEAL PATIENTS IN DHAKA, BANGLADESH
JASMIN AKTER ; SURESH CHANDRA DAS ; THANDAVARAYAN RAMAMURTHY ; HASAN ASHRAF ; DEBASISH SAHA ; ABU SYED GOLAM FARUQUE ; GOPINATH BALAKRISH NAIR ; MOHAMMED ABDUS SALAM
Tropical Medicine and Health 2005;33(3):119-126
Shiga toxin genes (stx) harbouring Escherichia coli (STEC) strains were isolated and identified from diarrhoeal patients visiting the Dhaka Hospital of ICDDR,B: Centre for Health and Population Research, Dhaka, Bangladesh. Of the 189 E. coli strains isolated from 775 diarrhoeal stool specimens, 19 harboured stx1, and one isolate was revealed to have amplicons for both stx1 and stx2 by a PCR assay. Sequence analysis of the 349-bp stx1 from representative isolates revealed 100% homology with the sequence of stx1 available in the GenBank. Among the stx1 positive isolates, two harboured the eae but none were positive for hlyA, katP, etpD or saa genes. Fifteen of the 20 stx positive strains could be categorized into 13 non-O157 serogroups while 4 were untypable and one was a rough strain. Most of the STEC strains were resistant to ampicillin, cephalothin, co-trimoxazole, tetracycline, and nalidixic acid. In the Vero cell assay, all the strains were negative for expression of Shiga toxin (Stx). Randomly amplified polymorphic DNA (RAPD) PCR analysis demonstrated genetic diversity. This is one of the first reports to show the presence of STEC in diarrhoeal patients in Bangladesh.
2.Genetic Algorithm-based Convolutional Neural Network Feature Engineering for Optimizing Coronary Heart Disease Prediction Performance
Erwin Yudi HIDAYAT ; Yani Parti ASTUTI ; Ika Novita DEWI ; Abu SALAM ; Moch. Arief SOELEMAN ; Zainal Arifin HASIBUAN ; Ahmed Sabeeh YOUSIF
Healthcare Informatics Research 2024;30(3):234-243
Objectives:
This study aimed to optimize early coronary heart disease (CHD) prediction using a genetic algorithm (GA)-based convolutional neural network (CNN) feature engineering approach. We sought to overcome the limitations of traditional hyperparameter optimization techniques by leveraging a GA for superior predictive performance in CHD detection.
Methods:
Utilizing a GA for hyperparameter optimization, we navigated a complex combinatorial space to identify optimal configurations for a CNN model. We also employed information gain for feature selection optimization, transforming the CHD datasets into an image-like input for the CNN architecture. The efficacy of this method was benchmarked against traditional optimization strategies.
Results:
The advanced GA-based CNN model outperformed traditional methods, achieving a substantial increase in accuracy. The optimized model delivered a promising accuracy range, with a peak of 85% in hyperparameter optimization and 100% accuracy when integrated with machine learning algorithms, namely naïve Bayes, support vector machine, decision tree, logistic regression, and random forest, for both binary and multiclass CHD prediction tasks.
Conclusions
The integration of a GA into CNN feature engineering is a powerful technique for improving the accuracy of CHD predictions. This approach results in a high degree of predictive reliability and can significantly contribute to the field of AI-driven healthcare, with the possibility of clinical deployment for early CHD detection. Future work will focus on expanding the approach to encompass a wider set of CHD data and potential integration with wearable technology for continuous health monitoring.
3.Genetic Algorithm-based Convolutional Neural Network Feature Engineering for Optimizing Coronary Heart Disease Prediction Performance
Erwin Yudi HIDAYAT ; Yani Parti ASTUTI ; Ika Novita DEWI ; Abu SALAM ; Moch. Arief SOELEMAN ; Zainal Arifin HASIBUAN ; Ahmed Sabeeh YOUSIF
Healthcare Informatics Research 2024;30(3):234-243
Objectives:
This study aimed to optimize early coronary heart disease (CHD) prediction using a genetic algorithm (GA)-based convolutional neural network (CNN) feature engineering approach. We sought to overcome the limitations of traditional hyperparameter optimization techniques by leveraging a GA for superior predictive performance in CHD detection.
Methods:
Utilizing a GA for hyperparameter optimization, we navigated a complex combinatorial space to identify optimal configurations for a CNN model. We also employed information gain for feature selection optimization, transforming the CHD datasets into an image-like input for the CNN architecture. The efficacy of this method was benchmarked against traditional optimization strategies.
Results:
The advanced GA-based CNN model outperformed traditional methods, achieving a substantial increase in accuracy. The optimized model delivered a promising accuracy range, with a peak of 85% in hyperparameter optimization and 100% accuracy when integrated with machine learning algorithms, namely naïve Bayes, support vector machine, decision tree, logistic regression, and random forest, for both binary and multiclass CHD prediction tasks.
Conclusions
The integration of a GA into CNN feature engineering is a powerful technique for improving the accuracy of CHD predictions. This approach results in a high degree of predictive reliability and can significantly contribute to the field of AI-driven healthcare, with the possibility of clinical deployment for early CHD detection. Future work will focus on expanding the approach to encompass a wider set of CHD data and potential integration with wearable technology for continuous health monitoring.
4.Genetic Algorithm-based Convolutional Neural Network Feature Engineering for Optimizing Coronary Heart Disease Prediction Performance
Erwin Yudi HIDAYAT ; Yani Parti ASTUTI ; Ika Novita DEWI ; Abu SALAM ; Moch. Arief SOELEMAN ; Zainal Arifin HASIBUAN ; Ahmed Sabeeh YOUSIF
Healthcare Informatics Research 2024;30(3):234-243
Objectives:
This study aimed to optimize early coronary heart disease (CHD) prediction using a genetic algorithm (GA)-based convolutional neural network (CNN) feature engineering approach. We sought to overcome the limitations of traditional hyperparameter optimization techniques by leveraging a GA for superior predictive performance in CHD detection.
Methods:
Utilizing a GA for hyperparameter optimization, we navigated a complex combinatorial space to identify optimal configurations for a CNN model. We also employed information gain for feature selection optimization, transforming the CHD datasets into an image-like input for the CNN architecture. The efficacy of this method was benchmarked against traditional optimization strategies.
Results:
The advanced GA-based CNN model outperformed traditional methods, achieving a substantial increase in accuracy. The optimized model delivered a promising accuracy range, with a peak of 85% in hyperparameter optimization and 100% accuracy when integrated with machine learning algorithms, namely naïve Bayes, support vector machine, decision tree, logistic regression, and random forest, for both binary and multiclass CHD prediction tasks.
Conclusions
The integration of a GA into CNN feature engineering is a powerful technique for improving the accuracy of CHD predictions. This approach results in a high degree of predictive reliability and can significantly contribute to the field of AI-driven healthcare, with the possibility of clinical deployment for early CHD detection. Future work will focus on expanding the approach to encompass a wider set of CHD data and potential integration with wearable technology for continuous health monitoring.
5.Genetic Algorithm-based Convolutional Neural Network Feature Engineering for Optimizing Coronary Heart Disease Prediction Performance
Erwin Yudi HIDAYAT ; Yani Parti ASTUTI ; Ika Novita DEWI ; Abu SALAM ; Moch. Arief SOELEMAN ; Zainal Arifin HASIBUAN ; Ahmed Sabeeh YOUSIF
Healthcare Informatics Research 2024;30(3):234-243
Objectives:
This study aimed to optimize early coronary heart disease (CHD) prediction using a genetic algorithm (GA)-based convolutional neural network (CNN) feature engineering approach. We sought to overcome the limitations of traditional hyperparameter optimization techniques by leveraging a GA for superior predictive performance in CHD detection.
Methods:
Utilizing a GA for hyperparameter optimization, we navigated a complex combinatorial space to identify optimal configurations for a CNN model. We also employed information gain for feature selection optimization, transforming the CHD datasets into an image-like input for the CNN architecture. The efficacy of this method was benchmarked against traditional optimization strategies.
Results:
The advanced GA-based CNN model outperformed traditional methods, achieving a substantial increase in accuracy. The optimized model delivered a promising accuracy range, with a peak of 85% in hyperparameter optimization and 100% accuracy when integrated with machine learning algorithms, namely naïve Bayes, support vector machine, decision tree, logistic regression, and random forest, for both binary and multiclass CHD prediction tasks.
Conclusions
The integration of a GA into CNN feature engineering is a powerful technique for improving the accuracy of CHD predictions. This approach results in a high degree of predictive reliability and can significantly contribute to the field of AI-driven healthcare, with the possibility of clinical deployment for early CHD detection. Future work will focus on expanding the approach to encompass a wider set of CHD data and potential integration with wearable technology for continuous health monitoring.