1.A novel homozygous splicing mutation in AK7 causes multiple morphological abnormalities of sperm flagella in patients from consanguineous Pakistani families.
Ansar HUSSAIN ; Huan ZHANG ; Muhammad ZUBAIR ; Wasim SHAH ; Khalid KHAN ; Imtiaz ALI ; Yousaf RAZA ; Aurang ZEB ; Tanveer ABBAS ; Nisar AHMED ; Fazal RAHIM ; Ghulam MUSTAFA ; Meftah UDDIN ; Nadeem ULLAH ; Musavir ABBAS ; Muzammil Ahmad KHAN ; Hui MA ; Bo YANG ; Qing-Hua SHI
Asian Journal of Andrology 2025;27(2):189-195
Multiple morphological abnormalities of the flagella (MMAF) represent a severe form of sperm defects leading to asthenozoospermia and male infertility. In this study, we identified a novel homozygous splicing mutation (c.871-4 ACA>A) in the adenylate kinase 7 (AK7) gene by whole-exome sequencing in infertile individuals. Spermatozoa from affected individuals exhibited typical MMAF characteristics, including coiled, bent, short, absent, and irregular flagella. Transmission electron microscopy analysis showed disorganized axonemal structure and abnormal mitochondrial sheets in sperm flagella. Immunofluorescence staining confirmed the absence of AK7 protein from the patients' spermatozoa, validating the pathogenic nature of the mutation. This study provides direct evidence linking the AK7 gene to MMAF-associated asthenozoospermia in humans, expanding the mutational spectrum of AK7 and enhancing our understanding of the genetic basis of male infertility.
Humans
;
Male
;
Sperm Tail/ultrastructure*
;
Homozygote
;
Consanguinity
;
Asthenozoospermia/pathology*
;
Infertility, Male/genetics*
;
Mutation
;
Pakistan
;
Adenylate Kinase/genetics*
;
Adult
;
Pedigree
;
RNA Splicing
;
Exome Sequencing
;
Spermatozoa
2.Novel bi-allelic variants in DNAH10 lead to multiple morphological abnormalities of sperm flagella and male infertility.
Muhammad SHOAIB ; Muhammad ZUBAIR ; Wasim SHAH ; Meftah UDDIN ; Ansar HUSSAIN ; Ghulam MUSTAFA ; Fazal RAHIM ; Huan ZHANG ; Imtiaz ALI ; Tanveer ABBAS ; Yousaf RAZA ; Sui-Xing FAN ; Qing-Hua SHI
Asian Journal of Andrology 2025;27(4):516-523
Multiple morphological abnormalities of sperm flagella (MMAF) is a severe form of asthenoteratozoospermia, characterized by morphological abnormalities and reduced motility of sperm, causing male infertility. Although approximately 60% of MMAF cases can be explained genetically, the etiology of the remaining cases is unclear. Here, we identified two novel compound heterozygous variants in the gene, dynein axonemal heavy chain 10 ( DNAH10 ), in three patients from two unrelated Pakistani families using whole-exome sequencing (WES), including one compound heterozygous mutation ( DNAH10 : c.9409C>A [p.P3137T]; c.12946G>C [p.D4316H]) in family 1 and another compound heterozygous mutation ( DNAH10 : c.8849G>A [p.G2950D]; c.11509C>T [p.R3687W]) in family 2. All the identified variants are absent or rare in public genome databases and are predicted to have deleterious effects according to multiple bioinformatic tools. Sanger sequencing revealed that these variants follow an autosomal recessive mode of inheritance. Hematoxylin and eosin (H&E) staining revealed MMAF, including sperm head abnormalities, in the patients. In addition, immunofluorescence staining revealed loss of DNAH10 protein signals along sperm flagella. These findings broaden the spectrum of DNAH10 variants and expand understanding of the genetic basis of male infertility associated with the MMAF phenotype.
Adult
;
Humans
;
Male
;
Alleles
;
Asthenozoospermia/pathology*
;
Axonemal Dyneins/genetics*
;
Dyneins/genetics*
;
Exome Sequencing
;
Infertility, Male/pathology*
;
Mutation
;
Pakistan
;
Pedigree
;
Sperm Tail/pathology*
3.A novel frameshift variant in AXDND1 may cause multiple morphological abnormalities of the sperm flagella in a consanguineous Pakistani family.
Imtiaz ALI ; Meng-Lei YANG ; Fazal RAHIM ; Haider ALI ; Aurang ZEB ; Nisar AHMAD ; Yousaf RAZA ; Wang YUE ; Muhammad SHOAIB ; Tanveer ABBAS ; Wasim SHAH ; Hui MA ; Huan ZHANG ; Hao YIN ; Qing-Hua SHI
Asian Journal of Andrology 2025;27(6):691-696
The syndrome of multiple morphological abnormalities of the sperm flagella (MMAF) is one of the most serious kinds of sperm defects, leading to asthenoteratozoospermia and male infertility. In this study, we use whole-exome sequencing to identify genetic factors that account for male infertility in a patient born from a consanguineous Pakistani couple. A homozygous frameshift mutation (c.1399_1402del; p.Gln468ArgfsTer2) in axonemal dynein light chain domain containing 1 ( AXDND1 ) was identified in the patient. Sanger sequencing data showed that the mutation was cosegregated recessively with male infertility in this family. Papanicolaou staining and scanning electron microscopy analysis of the sperm revealed severely abnormal flagellar morphology in the patient. Immunofluorescence and western blot showed undetectable AXDND1 expression in the sperm of the patient. Transmission electron microscopy analysis showed disorganized sperm axonemal structure in the patient, particularly missing the central pair of microtubules. Immunofluorescence staining showed the absence of sperm-associated antigen 6 (SPAG6) and dynein axonemal light intermediate chain 1 (DNALI1) signals in the sperm flagella of the patient. These findings indicate that AXDND1 is essential for the organization of flagellar axoneme and provide direct evidence that AXDND1 is a MMAF gene in humans, thus expanding the phenotypic spectrum of AXDND1 frameshift mutations.
Humans
;
Male
;
Sperm Tail/ultrastructure*
;
Frameshift Mutation
;
Infertility, Male/pathology*
;
Pakistan
;
Pedigree
;
Consanguinity
;
Axonemal Dyneins/genetics*
;
Adult
;
Spermatozoa
;
Exome Sequencing
4.CRX-527 as a candidate adjuvant in a recombinant BCG-based malaria vaccine
Nor Munirah Zakaria ; Muhammad Adamu Abbas ; Rapeah Suppian
Asian Pacific Journal of Tropical Biomedicine 2024;14(1):1-7
Abstract:
Objective: To investigate the role of CRX-527, a Toll-like receptor 4 agonist, as the possible adjuvant for recombinant Mycobacterium bovis Bacillus Calmette-Guerin expressing merozoite surface protein 1C (BCG-MSP-1C). Methods: The mice were immunized with BCG and BCG-MSP- 1C in the presence and absence of CRX-527. The untreated mice (injected with PBS-T80 only) were the negative control. The ability of CRX-527 to enhance IgG and its subclasses, as well as IL-4 and IFN-γ production in the serum and spleen supernatant was evaluated using ELISA. Results: Mice immunized with BCG-MSP-1C exhibited the highest production of IgGs, IL-4 and IFN-γ after third immunization. In addition, CRX-527 further promoted the production of total IgG and IgG subclasses as well as IFN-γ and IL-4 in the serum and splenocytes of immunized mice. Conclusions: CRX-527 has the potential as an adjuvant candidate for the candidate vaccines. Further study is needed to verify appropriate dosage for immunization and its efficacy.
5.A novel missense mutation of CCDC34 causes male infertility with oligoasthenoteratozoospermia in a consanguineous Pakistani family.
Nisar AHMAD ; Meng-Lei YANG ; Aurang ZEB ; Jian-Teng ZHOU ; Muhammad ZUBAIR ; Tanveer ABBAS ; Xiao-Hua JIANG ; Yuan-Wei ZHANG ; Huan ZHANG ; Wasim SHAH ; Qing-Hua SHI
Asian Journal of Andrology 2024;26(6):605-609
Male infertility is a worldwide health issue, affecting 8%-12% of the global population. Oligoasthenoteratozoospermia (OAT) represents a severe type of male infertility, characterized by reduced sperm count and motility and an increased frequency of sperm with aberrant morphology. Using whole-exome sequencing, this study identified a novel missense mutation (c.848C>A, p.A283E) in the coiled-coil domain-containing 34 gene (CCDC34) in a consanguineous Pakistani family. This rare mutation was predicted to be deleterious and to affect the protein stability. Hematoxylin and eosin staining of spermatozoa from the patient with OAT revealed multiple morphological abnormalities of the flagella and transmission electron microscopy indicated axonemal ultrastructural defects with a lack of outer dynein arms. These findings indicated that CCDC34 plays a role in maintaining the axonemal ultrastructure and the assembly or stability of the outer dynein arms, thus expanding the phenotypic spectrum of CCDC34 missense mutations.
Humans
;
Male
;
Mutation, Missense/genetics*
;
Pakistan
;
Consanguinity
;
Asthenozoospermia/genetics*
;
Pedigree
;
Infertility, Male/genetics*
;
Adult
;
Oligospermia/genetics*
;
Exome Sequencing
;
Axoneme/ultrastructure*
;
Spermatozoa/ultrastructure*
6.Perceived attitudes and barriers towards medical research: a survey of Jordanian interns, residents, and other postgraduates
Jamil ALMOHTASIB ; Leen AL-HUNEIDY ; Hana TAHA ; Rama RAYYAN ; Shahd MANSOUR ; Jehad SAMHOURI ; Muhammad HAMMOURI ; Hussam AL-SOMADI ; Adees Wirtan BEDROS ; Jaafar AL-OMAIR ; Rand ABBAS ; Mustafa Ibrahim ABU-USBA ; Abdallah AL-ANI
Korean Journal of Medical Education 2023;35(3):249-261
Purpose:
We investigated research barriers among Jordanian medical postgraduates to understand the current context of the local health research landscape and improve scholarly output.
Methods:
Using a validated questionnaire, Jordanian interns, residents, specialists, and consultants were examined for their perceived attitudes and barriers towards research. Participants were conveniently sampled from public, university, military, and private institutions. Differences in responses were examined using the Student t-test and analysis of variance. Binary logistic regression was utilized to examine predictors of being able to publish.
Results:
A total of 1,141 Jordanian medical postgraduates were recruited, of which 61.3% were junior postgraduates (i.e., interns and residents in their first 2 years of residency) while 38.7% were senior postgraduates (i.e., senior residents, specialists, and consultants). Around 76.0% of participants had no peer-reviewed publications. Of those with least one publication (n=273), only 31.1% had first authorships. Participants portrayed dominantly positive attitudes towards the importance of research. There were no significant differences between junior and senior postgraduates for overall attitudes (p=0.486) and knowledge barriers scores (p=0.0261). Conversely, senior postgraduates demonstrated higher mean organizational barriers (p<0.001). Seniority (odds ratio [OR], 5.268; 95% confidence interval [CI], 3.341–8.307), age (OR, 1.087; 95% CI, 1.019–1.159), academic standing (OR, 1.730; 95% CI, 1.103–2.715), and confidence (OR, 1.086; 95% CI, 1.009–1.169) were positive predictors of publication in peer reviewed journals.
Conclusion
The Jordanian medical research landscape is riddled with all forms of different barriers. The reworking of current and integration of new research training programs are of utmost importance.
7.A recurrent homozygous missense mutation in CCDC103 causes asthenoteratozoospermia due to disorganized dynein arms.
Muhammad ZUBAIR ; Ranjha KHAN ; Ao MA ; Uzma HAMEED ; Mazhar KHAN ; Tanveer ABBAS ; Riaz AHMAD ; Jian-Teng ZHOU ; Wasim SHAH ; Ansar HUSSAIN ; Nisar AHMED ; Ihsan KHAN ; Khalid KHAN ; Yuan-Wei ZHANG ; Huan ZHANG ; Li-Min WU ; Qing-Hua SHI
Asian Journal of Andrology 2022;24(3):255-259
Asthenoteratozoospermia is one of the most severe types of qualitative sperm defects. Most cases are due to mutations in genes encoding the components of sperm flagella, which have an ultrastructure similar to that of motile cilia. Coiled-coil domain containing 103 (CCDC103) is an outer dynein arm assembly factor, and pathogenic variants of CCDC103 cause primary ciliary dyskinesia (PCD). However, whether CCDC103 pathogenic variants cause severe asthenoteratozoospermia has yet to be determined. Whole-exome sequencing (WES) was performed for two individuals with nonsyndromic asthenoteratozoospermia in a consanguineous family. A homozygous CCDC103 variant segregating recessively with an infertility phenotype was identified (ENST00000035776.2, c.461A>C, p.His154Pro). CCDC103 p.His154Pro was previously reported as a high prevalence mutation causing PCD, though the reproductive phenotype of these PCD individuals is unknown. Transmission electron microscopy (TEM) of affected individuals' spermatozoa showed that the mid-piece was severely damaged with disorganized dynein arms, similar to the abnormal ultrastructure of respiratory ciliary of PCD individuals with the same mutation. Thus, our findings expand the phenotype spectrum of CCDC103 p.His154Pro as a novel pathogenic gene for nonsyndromic asthenospermia.
Asthenozoospermia/pathology*
;
Dyneins/genetics*
;
Homozygote
;
Humans
;
Male
;
Microtubule-Associated Proteins
;
Mutation
;
Mutation, Missense
;
Sperm Tail/metabolism*
8.Molecular characterization of mycotoxin-producing Aspergillus parasiticus and sensitivity pattern to different disinfectants
Zunira Mughis ; Muhammad Asad Ali ; Aftab Ahmad Anjum ; Muhammad Ovais Omer ; Mateen Abbas ; Maria Najeeb
Malaysian Journal of Microbiology 2022;18(5):524-532
Aims:
The study was aimed to isolate and characterize the mycotoxin-producing filamentous Aspergillus parasiticus from the feed samples. The sensitivity pattern of the isolates was assessed against different disinfectants.
Methodology and results:
Fifty different feed samples were screened for A. parasiticus isolation. Isolates were subjected to macroscopic and microscopic characterization. Polymerase chain reaction was performed to confirm the isolates at the genomic level. Mycotoxin producing potential of the isolates was assessed by thin-layer chromatography (TLC). To quantify the toxins, high performance liquid (HPLC) was employed. The antifungal potential of disinfectants was determined by the well diffusion method followed by minimum inhibitory concentration (MIC) calculation. Out of twenty isolates of A. parasiticus, 11(55%) isolates were observed positive for toxin production. Three toxigenic isolates (AspP2, AspP4 and AspP8) were selected to evaluate their susceptibility against disinfectants by well diffusion method. AspP2 produced maximum (5.90 ng/mL) toxin, followed by AspP4 (3.11 ng/mL) and AspP8 (18.47 ng/mL). Terralin showed maximum fungicidal activity with 29.66 ± 8.08 mm zone of inhibition at 0.42 μg/mL MIC. Hypochlorite and Instru Star showed 99% disinfection with 30, 60 and 90 min contact time (6 mean log reduction) for all A. parasiticus isolates. Alpha Guard inhibited growth after 15 min contact time for all the isolates.
Conclusion, significance and impact of study
This study provides data indicating the contamination of feed samples with mycotoxin-producing A. parasiticus isolates and their sensitivity against commercially available disinfectants. Use of these disinfectants in appropriate concentrations and time could help prevent the contamination of food, feed and healthcare settings with the fungal species.
Mycotoxins
;
Aspergillus
9.A DNA-based nanocarrier for efficient cancer therapy
Abbas MUHAMMAD ; Mirza Muhammad Faran Ashraf Baig ; Zhang YALIANG ; Yang YU-SHUN ; Wu SONGYU ; Hu YIQIAO ; Wang ZHONG-CHANG ; Zhu HAI-LIANG
Journal of Pharmaceutical Analysis 2021;11(3):330-339
The study aimed to achieve enhanced targeted cytotoxicity and cell-internalization of cisplatin-loaded deoxyribonucleic acid-nanothread (CPT-DNA-NT),mediated by scavenger receptors into HeLa cells.DNA-NT was developed with stiff-topology utilizing circular-scaffold to encapsulate CPT.Atomic force microscopy (AFM) characterization of the DNA-NT showed uniformity in the structure with a diameter of 50-150 nm and length of 300-600 nm.The successful fabrication of the DNA-NT was confirmed through native-polyacrylamide gel electrophoresis analysis,as large the molecular-weight (polymeric) DNA-NT did not split into constituting strands under applied current and voltage.The results of cell viability confirmed that blank DNA-NT had the least cytotoxicity at the highest concentration (512 nM) with a viability of 92% as evidence of its biocompatibility for drug delivery.MTT assay showed superior cyto-toxicity of CPT-DNA-NT than that of the free CPT due to the depot release of CPT after DNA-NT inter-nalization.The DNA-NT exhibited targeted cell internalizations with the controlled intracellular release of CPT (from DNA-NT),as illustrated in confocal images.Therefore,in vitro cytotoxicity assessment through flow cytometry showed enhanced apoptosis (72.7%) with CPT-DNA-NT (compared to free CPT;64.4%).CPT-DNA-NT,being poly-anionic,showed enhanced endocytosis via scavenger receptors.
10. Pam3CSK4 enhances adaptive immune responses to recombinant Mycobacterium bovis bacille Calmette-Guérin expressing Plasmodium falciparum C-terminus merozoite surface protein-1
Mohamed ABDIKARIM ; Muhammad ABBAS ; Munirah ZAKARIA ; Rapeah SUPPIAN ; Muhammad ABBAS ; Robaiza ZAKARIA
Asian Pacific Journal of Tropical Biomedicine 2019;9(7):271-277
Objective: To determine the effects of toll-like receptor 2 (TLR-2) agonist, Pam3CSK4, on cellular and humoral immune response against recombinant Mycobacterium bovis bacille Calmette-Guérin (rBCG) expressing the C-terminus of merozoite surface protein-1 of Plasmodium falciparum. Methods: Six groups of mice (n=6 per group) received intraperitoneal phosphate buffered saline T80 (PBS-T80), BCG or rBCG in the presence or absence of Pam3CSK4. Enzyme-linked immunosorbent assay was carried out to measure serum total IgG, IgG1, IgG2a, and IgG2b production. Spleens were also harvested and splenocytes were co-cultured with rBCG antigen for in vitro determination of IL-4 and IFN-γ via enzyme-linked immunosorbent assay. Results: The production of total IgG and the isotype IgG1, IgG2a and IgG2b was significantly higher in rBCG-immunised mice than in the BCG and PBS-T80-immunised mice, and Pam3CSK4 further enhanced their productions. A similar pattern was also observed in IFN-γ production. Moreover, there was no significant difference in IL-4 production in all groups either in the presence or absence of Pam3CSK4. Conclusions: We present evidence of the adjuvant effects of TLR-2 agonist in enhancing the production of total IgG, IgG1, IgG2a, IgG2b, as well as IFN-γ in response to rBCG. However, the presence or absence of Pam3CSK4 had no effect on IL-4 production.


Result Analysis
Print
Save
E-mail