1.Roles of Tumor Infiltrating Dendritic Cells and T Lymphocytes in Tumor Immunity of EBV-associated Gastric Carcinoma
Lin XIAO ; Dan HE ; Yungang DING ; Zhiying FENG ; Chunkui SHAO
Journal of Sun Yat-sen University(Medical Sciences) 2010;31(2):253-257
[Objective]To explore the roles of TIDC(tumor infiltrating dendritic cell)and TIL-T(tumor infiltrating T lymphocyte)in tumor immunity of EBV-associated gastric carcinoma(EBVaGC)and their clinical significance.[Methods]TIDC and TIL-T in EBVaGC(n=49)and EBVnGC(EBV-negative gastric carcinoma)(n=20)were detected by immunohistochemistry method and then their subtypes and their relationships with clinical and pathological factors were analyzed.[Results]Mild infiltration was detected in 29 of 49(59.2%)EBVaGCs and 18 of 20(90%)EBVnGCs,while marked infiltration of TIDC was detected in 20 of 49(40.8%)EBVaGCs and 2 of 20(10%)EBVnGCs.And the difference between the two groups was significant (P=0.013).The number of TIL-T in EBVaGC was hisher than that in EBVnGC(P=0.017),and most of them were CTLs.The number of TIL-T was positively correlated with that of TIDC(r=0.386,n=49,P=0.006).The degree of TIL-T infiltration in EBVaGC had negative relationship with the lymph node metastasis(P<0.001),while TIDC had no relationship with the clinical features.[Conclusion]TIDC and TIL-T may play important roles in the tumor immunity of EBVaGC;TIDC may contribute to the TIL-T recruitment in EBVaGC.
2.Methods and principles for coding of stock materials
Xiangang LIANG ; Yungang HE ; Liping LIU ; Weihua LI
Chinese Medical Equipment Journal 2015;(9):123-125
To explore the methods and principles for the coding of stock materials in order to realize efficient management, summarization and analysis of the stock materials in the equipment and glass equipment warehouses, to standardize the purchase channel and to facilitate the application for the stock materials. The warehouse name was changed and the purchase channel was standardized, and the coding was sequenced with the principles of system, or-der, concentration, uniqueness, completeness, memory, size and etc. The standardization and completeness of the coding of the stock materials were improved to realize proper directory architecture for materials coding. The coding facilitates the summarization, planned allocation and accounting of stock materials, with repeated purchase avoided and stock management enhanced.
3.dbDEMC 3.0:Functional Exploration of Differentially Expressed miRNAs in Cancers of Human and Model Organisms
Xu FENG ; Wang YIFAN ; Ling YUNCHAO ; Zhou CHENFEN ; Wang HAIZHOU ; E.Teschendorff ANDREW ; Zhao YI ; Zhao HAITAO ; He YUNGANG ; Zhang GUOQING ; Yang ZHEN
Genomics, Proteomics & Bioinformatics 2022;20(3):446-454
MicroRNAs(miRNAs)are important regulators in gene expression.The dysregulation of miRNA expression is widely reported in the transformation from physiological to pathological states of cells.A large number of differentially expressed miRNAs(DEMs)have been identified in various human cancers by using high-throughput technologies,such as microarray and miRNA-seq.Through mining of published studies with high-throughput experiment information,the data-base of DEMs in human cancers(dbDEMC)was constructed with the aim of providing a systematic resource for the storage and query of the DEMs.Here we report an update of the dbDEMC to version 3.0,which contains two-fold more data entries than the second version and now includes also data from mice and rats.The dbDEMC 3.0 contains 3268 unique DEMs in 40 different cancer types.The current datasets for differential expression analysis have expanded to 9 generalized cat-egories.Moreover,the current release integrates functional annotations of DEMs obtained by using experimentally validated targets.The annotations can be of great benefit to the intensive analysis of the roles of DEMs in cancer.In summary,dbDEMC 3.0 provides a valuable resource for charac-terizing molecular functions and regulatory mechanisms of DEMs in human cancers.