1.Bioinformatics prediction on glutathione S-transferase antigen epitopes of Echinoccocus granulosus
Zongji LI ; Yuankui CHU ; Xin YU ; Shuqin DING ; Xueying LIU ; Wei ZHAO
International Journal of Laboratory Medicine 2015;(13):1818-1820
Objective To analyse the secondary structure of glutathions S-transferase of Echinoccocus granulosus(EgGST)and predict the B cell and T cell epitopes with informatics tools,in order to provide basic data and references for the following design of epitope vaccine.Methods The B cell and T cell epitopes of EgGST were predicted by DNAstar,Biosun software and Propred MHC class-Ⅱ Binding Peptide Prediction Server software.Results Many distinct antigenic epitopes of EgGST were identified by comput-er,there existed 8 B cell epitopes and 7 T cell epitopes.Conclusion Analysis of predicted epitopes of EgGST antigenic might be sig-nificant for future research of epitope vaccine.
2."Effect of smoking on""destructive""blood lipid before PCI in male coronary artery disease"
Xin YU ; Yuankui CHU ; Xuevo HAN ; Zhen YANG ; Yiqing ZHANG ; Rong MA
International Journal of Laboratory Medicine 2014;(23):3162-3164
Objective To analyze the effect of smoking on blood lipid before percutaneous coronary intervention(PCI)in male coronary heart disease(CHD).Methods The clinical data in 124 cases of CHD with PCI were randomly extracted and divided into the smoking group (n = 88 )and the non-smoking group (n = 36 ).The age,past disease history,triglycerides (TG),cholesterol (CHOL),low density lipoprotein(LDL)and high density lipoprotein(HDL)were retrospectively investigated.Results The LDL level of the smoking group was(3.1±1.34)mmol/L,which was significantly higher than(2.5 ±0.95)mmol/L in the non-smoking group with statistical difference between them(P <0.05);the level of TG,HDL and LDL in the CHOL≥4.5 mmol/L group were (2.5±1.49)mmol/L,(0.99±0.29)mmol/L and(3.6 ±1.13)mmol/L respectively,which were hither than(1.8 ±1.23)mmol/L, (0.88±0.20)mmol/L and(2.2±0.69)mmol/L in the CHOL≤4.5 mmol/L group respectively,the differences among them had statistical significance(P <0.05 );the Sperman analysis found that there was a positive correlation between the level of vascular change with CHOL and LDL,at the same time the smoking level was negatively correlated with LDLA.Conclusion Smoking, CHOL and LDL have a close relationship with the male coronary heart disease.Moreover,smoking can affect the lipid metabolism and probably increase the risk of coronary heart disease.
3.The relationship of the genetic polymorphism of IL-6-174 and the response to benazepril treatment in patients with hypertensive renal damage
Xin YU ; Meiling YU ; Dekai ZHANG ; Yuankui CHU ; Yiqing ZHANG ; Jing BAI ; Yiwen XING ; Zhen YANG
Tianjin Medical Journal 2017;45(5):497-501
Objective To study the relationship between the genetic polymorphism of interleukine-6 (IL-6)-174 and the response to benazepril treatment in patients with hypertensive renal damage. Methods Two hundred and eighty-four patients with hypertension were enrolled in this study. The hypertensive renal damage was defined by the measurement of urinary albumin excretion rate (UAER). One hundred and sixty healthy subjects were enrolled simultaneously as control group. Blood samples were obtained from all the subjects, and plasma levels of IL-6 and the genotype of gene IL-6-174 were detected. The patients with hypertensive renal damage were treated with benazepril for 16 weeks. The responses were evaluated by the changes of UAER level to benazepril in different genotypes. Results Genotype CC was the most common of the gene IL-6-174 in patients with hypertension, followed by GG and GC successively, with the G/C allele frequency of 47%and 53%(P<0.05), while in patients with hypertensive renal damage, GG was the most common genotype of the gene IL-6-174, followed by GC and CC successively, with the G/C allele frequency of 68%and 32%(P<0.05). After benazepril treatment, the UAER was decreased most in patients with genotype CC, followed by GC and GG successively ( P<0.05). Conclusion The G allele frequency of the gene IL-6-174 is related with hypertensive renal damage in patients in Ningxia, with GG as the most common genotype. The patients with CC genotype have the best response to benazepril treatment, with most decreased UAER.
4.Protective effect of total flavonoids of lycium barbarum on vascular endothelial cells in type 2 diabetic rats
Wei WANG ; Jia SHANG ; Yuankui CHU
Chongqing Medicine 2017;46(32):4481-4483
Objective To study the protective effect of total flavonoids of lycium barbarum(TFLB) on vascular endothelial cells in streptozotocin(STZ)-induced diabetic mellitus(DM) rats injury model.Methods The injury model of DM rats was induced by STZ,and the rats were divided into normal control group,DM model group and TFLB interventiongroup(60,90 and 120 mg/mL).Rats in the normal control group and the DM model group were given the same amount of intragastric administration of normal saline every day.The rats in the intervention group were treated with TFLB at different concentrations for 4 weeks.After filling the stomach for 4 weeks,the blood samples were taken from the chest cavity,and the changes of serum vWF,sTM and sEPCR were measured by ELISA.The tissue of the thoracic aorta was removed and stained by HE,and the protective effect of TFLB on the vascular endothelium in DM rats was observed.Results Compared with DM model group,the levels of vascular endothelial function related factors vWF,sTM and sEPCR were down-regulated in the TFLB intervention group,and the difference was statistically significant(P<0.05,P<0.01).In the TFLB intervention group,with the increase of TFLB dose,the intima thickening degree of the rats was significantly reduced;the formation of mountain-like protrusions was gradually decreased;the outer membrane showed no significant damage;the vascular morphology arrangement tended to be regular.Conclusion TFLB can improve the hyperglycemiacaused damage of vascular endothelial cells,regulate the content of vascular injury related factors,delay the progression of DM complications,and protect the cardiovascular system.
5.Construction and identification of recombinant retroviral vector of human ngn3 gene and its packaging cell line.
Yuankui CHU ; Changrong LÜ ; Dongmei CHEN ; Hui CAO ; Zhongying DOU
Chinese Journal of Biotechnology 2010;26(4):448-453
In order to construct the recombinant retrovirus vector of human ngn3 gene and its packaging cell line, we successfully amplified the open reading frame (ORF) of ngn3 gene from human fetal pancreatic tissue by RT-PCR. The PCR products of human ngn3 gene was subcloned into pMD18-T vectors and sequenced. Results showed that its sequence was fully consistent with the ngn3 gene published in GenBank(GenBank Accession No. BC126468). The correct fragment was digested by EcoR I and Hpa I from recombinant pMD18-T vector and inserted into the same restriction enzyme sites of retroviral vector pMSCV-neo. We got recombinant retrovirus vector pMSCV-ngn3, which was identified by double restriction enzyme digestion and then transfected into PT67 cells by lipofectamine 2000. We established the PT67-ngn3 packaging cell line by G418 selection, which was detected by RT-PCR and immunohistochemistry staining. The detection results showed that the Ngn3 expressed at the mRNA and protein level in the packaging cell line. RT-PCR detection and electronic microscope analysis showed that the recombinant retroviral vector pMSCV-ngn3 was packaged into infectious virus particles and released into the supernatant of the cells. These results demonstrated that a PT67-ngn3 packaging cell line was successfully established, and this could facilitate the study of differentiation of the human fetal pancreatic progenitor cells into insulin-producing cells by using the ngn3 gene.
Basic Helix-Loop-Helix Transcription Factors
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biosynthesis
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genetics
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Cell Differentiation
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drug effects
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Cell Line
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Cloning, Molecular
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Fetus
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Genetic Vectors
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genetics
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Humans
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Insulin-Secreting Cells
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cytology
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Molecular Sequence Data
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Nerve Tissue Proteins
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biosynthesis
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genetics
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Open Reading Frames
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genetics
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Pancreas
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cytology
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RNA, Messenger
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biosynthesis
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genetics
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Recombinant Proteins
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biosynthesis
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genetics
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pharmacology
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Retroviridae
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genetics
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metabolism
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Stem Cells
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cytology
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Transfection
6.Study on correlation between genetic polymorphism of TNF-α-308 with benazepril treatment response in patients with hypertensive renal damage in Ningxia area
Xin YU ; Meiling YU ; Dekai ZHANG ; Yuankui CHU ; Yiqing ZHANG ; Jing BAI ; Yiwen XING ; Zhen YANG
Chongqing Medicine 2018;47(1):23-25,28
Objective To study the correlation between the genetic polymorphism of tumor necrosis factor-α(TNF-α)-308 with benazepril treatment response in the patients with hypertensive renal damage in Ningxia area.Methods Two hundred and eighty-four patients initially diagnosed as hypertension were enrolled and the hypertensive renal damage defined by the measurement of urinary albumin excretion rate(UAER).At the same time 160 individuals undergoing healthy physical examination were selected as the normal blood pressure control group.The plasma samples were obtained from all the subjects,and plasma level of TNF-α and TNF-α-308 gene polymorphism were detected.Then the patients with hypertensive renal damage were interfered with benazepril as one of the antihypertensive drugs,and the treatment response of different TNF-α-308 genotypes to benazepril was observed,and the comparative analysis was performed.Results Among the TNF-α-308 genotypes in the patients with simple hypertension,genotype GA was the most common,followed by GG and AA successively,with the G/A allele frequency of 53 %/47 % (P<0.05).In the patients with hypertensive renal damage,genotype GG was the most common,followed by GA and AA successively,with the G/A allele frequency of 70%/30%,the genotypes and allele frequency had no statistical difference(P<0.05).Before and after benazepril treatment,the change range of UAER in the patients with genotype AA was maximal,followed by the genotype GA and GG,the difference among 3 groups was statistically significant(P<0.05).Conclusion The TNF-α-308 gene is correlated with hypertensive renal damage and its response to benazepril treatment.