1.Methodological breakthroughs and challenges in research of soil phage microecology.
Xiaofang WANG ; Shuo WANG ; Keming YANG ; Yike TANG ; Yangchun XU ; Qirong SHEN ; Zhong WEI
Chinese Journal of Biotechnology 2025;41(6):2310-2323
Phages, as obligate bacterial and archaeal parasites, constitute a virus group of paramount ecological significance due to their exceptional abundance and genetic diversity. These biological entities serve as critical regulators in Earth's ecosystems, driving biogeochemical cycles, energy fluxes, and ecosystem services across terrestrial and marine environments. Within soil microbiomes, phages function as microbial "dark matter," maintaining the soil-plant system balance through precise modulation of the microbial community structure and functional dynamics. Despite the growing research interests in soil phages in recent years, the proportion of such studies in environmental virology remains disproportionately low, which is primarily attributed to researchers' limited familiarity with the research methodologies for phage microecology, incomplete technical frameworks, and inherent challenges posed by soil environmental complexity. To address these challenges, this review synthesizes cutting-edge methodologies for soil phage investigation from four aspects: (1) tangential flow filtration (TFF)-based phage enrichment strategies; (2) integrated quantification approaches combining double-layer agar plating, epifluorescence microscopy, and flow cytometry; (3) multi-omics analytical pipelines leveraging metagenomics and viromics datasets; and (4) computational frameworks merging machine learning algorithms with eco-evolutionary theory for deciphering phage-host interaction networks. Through comparative analysis of methodological principles, technical merits, and application scopes, we establish a comprehensive workflow for soil phage research. Future research in this field should prioritize: (1) construction of soil phage resource libraries, (2) exploration of RNA phages based on transcriptomes, (3) functional characterization of unknown genes, and (4) deep integration and interaction validation of multi-omics data. This systematic methodological synthesis provides critical technical references for addressing fundamental challenges in characterizing soil phages regarding the community structure, functional potential, and interaction mechanisms with hosts.
Bacteriophages/physiology*
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Soil Microbiology
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Ecosystem
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Microbiota
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Metagenomics/methods*
2.Intervention effect of "Internet plus" postpartum health care service on postpartum depression
Jinfang YUAN ; Jun LYU ; Jinmei QIN ; Jian YANG ; Xiaofang XU
Shanghai Journal of Preventive Medicine 2024;36(9):899-903
ObjectiveTo explore the influence of "Internet plus" postpartum health care service on postpartum depression, and to provide an evidence for reducing the incidence of postpartum depression and improving the quality of life for postnatal women. MethodsMothers who gave birth between August 1, 2021 and June 30, 2023 lived in the six streets of Xuhui District were selected as the research subjects. The puerperants were randomly divided into the intervention group and the control group according to the order of enrollment using a numerical numbering system, with 210 cases in each of the intervention group and control group. The intervention group adopted the "Internet plus" postpartum health care services, while the control group adopted the conventional postpartum health care services. The risk factors related to postpartum mental health and the incidence of postpartum depression were compared between the two groups. ResultsThere was no statistically significant difference in the scores of postpartum mental health-related risk factors between the two groups at the first 2 weeks and 1st month after delivery (t=0.736 and t=1.260, P>0.05). However, there was a statistically significant difference in the scores of postpartum mental health-related risk factors at the 3rd months after delivery and 6th months after delivery (t=2.089, P<0.05; t=2.655, P<0.05). There was no statistically significant difference in depression scores at the first 2 weeks after the birth (t=0.560, P>0.05). In the 1st month, the 3rd month and the 6th month after delivery, the intervention group adopted the "Internet plus" postpartum health care service, thus the differences in depression scores were statistically significant (t=2.616, t=2.793 and t=3.107, P<0.05). Conclusion"Internet plus" postpartum health care service is conducive to reducing postpartum depression, promoting maternal mental health, and significantly improving the well-being of postnatal women.
3.Progress in the application of non-peptide gonadotropin-releasing hormone antagonist in the treatment of uterine fibroid
Yunxi ZHENG ; Xiaofang YI ; Congjian XU
Chinese Journal of Clinical Pharmacology and Therapeutics 2024;29(5):482-487
Non-peptide gonadotropin-releasing hormone antagonist(GnRH-antagonist)is a highly efficient and selective antagonist of GnRH receptor.The oral preparations(Elagolix,Relugolix and Linza-golix)had been approved for listing abroad.It shows efficacy in reducing the size of uterine fi-broid and controlling heavy bleeding.Appropriate combination of'add-back'therapy could improve the safety in medical application and patient com-pliance.Compared with other hormonal pharma-ceuticals,oral GnRH-antagonists showed promising prospects in the treatment of uterine fibroid.
4.Progress on the treatment of neonatal hypoxic-ischemic encephalopathy with combination of therapeutic hypothermia and drugs
Xiaofang XU ; Chunli LIU ; Yayu ZHANG
International Journal of Pediatrics 2024;51(5):335-340
Hypoxic-ischemic encephalopathy(HIE)is a neonatal brain injury disease caused by hypoxia and reduced cerebral blood flow due to perinatal asphyxia.Its incidence rate is quite high,and it is also one of the main factors leading to infant death. Effective treatment of HIE can reduce brain damage and improve the prognosis. In recent years,therapeutic hypothermia has been clinically recognized as an effective treatment for HIE,which can improve the survival rate of full-term infants with moderate to severe HIE and significantly reduce disability rates. However,the effective rate of the treatment is relatively low,with approximately 40% to 55% of children still facing moderate to severe neurodevelopmental sequela after therapeutic hypothermia.Therefore,a combination treament of HIE with neuroprotective drugs has been paid more attention.This treatment method further reduces the severity of hypoxic-ischemic brain injury,improves clinical symptoms,enhances neurological behavior,and alleviates neurodevelopmental disorders caused by hypoxic-ischemic brain injury,providing new ideas for exploring more neuroprotective therapies for HIE in the future.
5.Clinical Study on Xuanbai Chengqi Decoction in the Treatment of Severe Pneumonia Complicated with Gastrointestinal Dys-function of Lung Heat and FU-Organ Repletion Type
Guisong ZHU ; Xiaofang YIN ; Hong ZHU ; Rong JIA ; Zimeng ZOU ; Biao XU
Journal of Nanjing University of Traditional Chinese Medicine 2024;40(8):831-837
OBJECTIVE To explore the effect of Xuanbai Chengqi Decoction on respiratory and oxygenation functions and the ex-pression levels of serum aquaporin(AQP)1 and AQP5 in patients with severe pneumonia complicated with gastrointestinal dysfunction of lung heat and fu-organ repletion type.METHODS 60 patients with severe pneumonia complicated with gastrointestinal dysfunc-tion of lung heat and fu-organ repletion type were randomly divided into control group and treatment group,with 30 cases each.The control group received standardized Western medicine treatment,and the treatment group was treated with Xuanbai Chengqi Decoction in addition to the control group.Both groups were treated for 7 d.The respiratory rate and oxygenation index,mechanical ventilation u-tilization rate,the clinical score including CURB-65 and CPIS scores,TCM syndrome score,gastrointestinal function indicators inclu-ding intra-abdominal pressure,serum gastrin(GAS)and vasoactive intestinal peptide(VIP),AQP1 and AQP5 levels were compared between the two groups before and after treatment.Ventilation utilization and ICU hospitalization days during treatment were compared between the two groups.RESULTS After treatment,compared with the control group,the respiratory rate,TCM syndrome score and intra-abdominal pressure in the treatment group were decreased significantly(P<0.05,P<0.01);meanwhile,the oxygenation index and the levels of serum GAS,AQP1 and AQP5 were increased significantly(P<0.05,P<0.01).CONCLUSION Xuanbai Chengqi Decoction can significantly improve clinical symptoms such as respiratory and oxygenation functions in patients,and its mechanism may be related to the regulation of AQP1 and AQP5.
6.Effects of health education based on the integrated theory of health behavior change on cardiac function and exercise tolerance and nursing satisfaction in patients with chronic heart failure
Liping XU ; Xiaofang ZHANG ; Huixia XU ; Jian LUO
Chinese Journal of Health Management 2024;18(6):451-456
Objective:To analyze the impact of health education based on the integrated theory of health behavior change on the cardiac function, exercise endurance and nursing satisfaction in patients with chronic heart failure.Methods:In this randomized controlled trial, 130 patients with chronic heart failure admitted to Quzhou Hospital Affiliated with Wenzhou Medical University from June 2020 to December 2022 were selected as the research subjects. The patients were randomly divided into a control group and an experimental group (65 cases in each group) with a random number table method. The patients in the control group were given routine nursing care, the experimental group were given health education based on the integration theory of health behavior change on the basis of the control group, mainly including health assessment, health education, behavioral intervention, psychological support, etc. The intervention time for both group was 4 weeks. The independent sample t-test, χ2 test and Mann Whitney U test were applied to compare the improvement of cardiac function, plasma brain natriuretic peptide (BNP), echocardiographic indexes [left ventricular ejection fraction (LVEF), left ventricular volume index (LVMI) and left ventricular end-diastolic diameter (LVEDD)] and exercise endurance [maximum oxygen uptake (VO 2max), maximum power and exhaustion time] between the two groups, and the nursing satisfaction of the two groups was compared too. Based on the above results, the impact of health education based on the integrated theory of health behavior change on the cardiac function, exercise endurance and nursing satisfaction in patients with chronic heart failure were analyzed. Results:There was no statistically significant difference in various indicators between the two groups before intervention (all P>0.05). After the intervention, the BNP, LVMI and LVEDD in the experimental group were all clearly lower than those in the control group [(572.87±89.72) vs (680.46±104.32) mg/L, (140.74±9.54) vs (151.91±11.52) g/m 2 and (77.62±4.32) vs (80.31±5.57) mm, respectively], and they were all significantly lower than those before intervention [(963.41±228.69) mg/L, (170.33±12.61) g/m 2 and (90.10±6.77) mm, respectively]. The LVEF, the VO 2max, maximum power, exhaustion time, and nursing satisfaction in the experimental group were all significantly higher than those in the control group [54.55%±3.80% vs 52.16%±4.18%, (16.77±2.82) vs (15.61±3.15) ml·kg -1·ml -1, (88.91±7.13) vs (85.72±8.24) W, (13.47±1.62) vs (12.00±1.56) min, 95.4% vs 84.6%], and they were all significantly higher than those before intervention [50.11%±4.22%, (14.03±3.26) ml·kg -1·ml -1, (81.42±6.46) W, (10.02±0.82) min, respectively] (all P<0.05). Conclusion:Health education based on the integration theory of health behavior change is beneficial for improving the cardiac function, exercise endurance and nursing satisfaction in patients with chronic heart failure.
7.Impact of bladder volume on dosimetry of CTV and OAR in localized prostate cancer treated with proton therapy
Danni WANG ; Huan LI ; Cheng XU ; Wendong FAN ; Mei CHEN ; Xiaofang QIAN ; Dawei QIN ; Chensheng SHI ; Ruozhui ZHAO ; Weixiang QI ; Qiyun HUANG ; Jiayi CHEN ; Lu CAO
Chinese Journal of Radiation Oncology 2024;33(6):524-531
Objective:To evaluate the impact of bladder volume on dosimetric parameters of clinical target volume (CTV) and organs at risk (OAR) of intensity modulated proton therapy (IMPT) for localized prostate cancer during the treatment planning and daily treatment.Methods:Clinical data of 25 patients with localized prostate cancer admitted to Ruijin Hospital affiliated to Shanghai Jiao Tong University School of Medicine from November 2021 to June 2022 and enrolled in the "Proton Therapy System" (SAPT-PS-01) registered clinical trial were retrospectively analyzed. All patients were male and the median age was 72 years old. A total of 30 sets of IMPT plans were obtained. Based on the planning CT (30 sets) and weekly verification CT during treatment (172 sets), bladder volume, CTV and OAR dose parameters were collected. Spearman correlation analysis was used to evaluate the correlation between bladder volume in CT and the dosimetric parameters of CTV and OAR during IMPT plans, and Wilcoxon-Mann-Whitney test was adopted to compare the dosimetric parameters of CTV and OAR among different bladder volume change groups.Results:The V 95% of CTV1 and CTV2 were both 100.0%±0.0% in IMPT plans. Bladder volume was significantly negatively correlated with D mean, V 70 Gy(RBE), V 60 Gy(RBE), V 50 Gy(RBE), V 40 Gy(RBE) of the bladder ( P<0.001, 0.003, <0.001, <0.001,<0.001), and D mean, V 50 Gy(RBE) of the small intestine (both P<0.001). During treatment, bladder D mean, V 70 Gy(RBE), V 60 Gy(RBE), V 50 Gy(RBE), V 40 Gy(RBE)( P<0.001, 0.001, <0.001, <0.001, <0.001), rectal D mean, V 50 Gy(RBE), V 40 Gy(RBE) (all P<0.001), small intestine D mean, V 50 Gy (RBE) (both P<0.001) of patients with bladder volume increase >20% compared to baseline were significantly decreased compared to those in IMPT plans. But CTV1 V 100%, and CTV2 V 95% were significantly decreased too( P=0.029, 0.020). In the bladder volume decreased>20% patients, the D mean, V 70 Gy(RBE), V 60 Gy(RBE), V 50 Gy(RBE), V 40 Gy(RBE) of the bladder were significantly increased compared to those in IMPT plans (all P<0.001). However, a bladder volume reduction of ≤20% and increase of ≤20% from baseline had no significant impact on CTV and OAR dosimetric parameters during treatment. Conclusions:For patients with localized prostate cancer undergoing proton therapy, a certain bladder volume should be ensured during planning CT scans. During the daily treatment, the bladder volume should be maintained between 80%-120% of the baseline level to ensure CTV coverage and good dose sparing to OAR.
8.Risk factors of aspiration during hospitalization in patients with ischemic stroke and establishment of a predictive model
Lingying YU ; Xiaolei WANG ; Xiaofang SHEN ; Jing CAO ; Ji XU ; Huaping DU
Journal of Clinical Medicine in Practice 2024;28(9):103-108
Objective To explore the risk factors of aspiration during hospitalization in patients with ischemic stroke (IS) and establish a predictive model. Methods Based on the case-control design, clinical materials of 316 IS patients treated in the Department of Neurology of Suzhou Ninth Hospital Affiliated to Soochow University from March 2022 to October 2023 were retrospectively collected. According to incidence of aspiration during hospitalization, the patients were divided into case group with 89 cases (aspiration occurred during hospitalization) and control group with 227 cases (no aspiration occurred during hospitalization). Univariate and multivariate Logistic regression analyses were performed in both groups to screen out the risk factors of aspiration during hospitalization in IS patients. R software was used to extract 70 % of the data from the two groups as the training set (establishing a Nomogram model), and the remaining 30 % data was used as test set. Value of predictive model was evaluated by area under the curve (
9.Abnormal uterine bleeding and associated factors among female medical college students in Shanghai
LU Xuan, XIAO Tongtong, YOU Xiaofang, TAN Hui, QIAN Xu
Chinese Journal of School Health 2023;44(1):110-114
Objective:
To understand the prevalence and pattern of abnormal uterine bleeding (AUB) among female medical college students in Shanghai,to provide a basis for menstrual health intervention for female college students.
Methods:
A total of 912 female medical students from a university in Shanghai were selected through cluster sampling. An anonymous questionnaire survey on menstrual history and related factors was conducted in March 2021.
Results:
The prevalence of AUB among female medical college students was 39.9%, with cycle disordered and non cycle disordered AUB of 24.7% and 15.2%, respectively. Among female college students with AUB, 21.7% had two or three abnormal menstrual symptoms. Multivariate Logistic analysis showed that sleep quality was associated with both types of AUB, and female undergraduates with poorer and poor sleep quality were at increased risk of both cyclic disordered AUB ( OR =2.05) and non cyclic disordered AUB ( OR =2.00). Low BMI ( OR =1.66) and weight gain and loss ( OR =1.76) were associated with cycle disordered AUB. Frequent insomnia ( OR =2.45) was associated with non cyclic disordered AUB( P <0.05).
Conclusion
Abnormal uterine bleeding (AUB) is common in female college students, female medical college students with AUB have multiple concurrent abnormal bleeding patterns. Factors associated with AUB varied according to the type of AUB, with sleep quality correlates with both types of AUB.
10.Bone/cartilage immunomodulating hydrogels: construction strategies and applications.
Maoyuan LI ; Guoshuang ZHENG ; Jiahui YANG ; Xiaofang CHEN ; Jianfeng XU ; Dewei ZHAO
Chinese Journal of Reparative and Reconstructive Surgery 2023;37(11):1423-1430
OBJECTIVE:
To review the research progress in the construction strategy and application of bone/cartilage immunomodulating hydrogels.
METHODS:
The literature related to bone/cartilage immunomodulating hydrogels at home and abroad in recent years was reviewed and summarized from the immune response mechanism of different immune cells, the construction strategy of immunomodulating hydrogels, and their practical applications.
RESULTS:
According to the immune response mechanism of different immune cells, the biological materials with immunoregulatory effect is designed, which can regulate the immune response of the body and thus promote the regeneration of bone/cartilage tissue. Immunomodulating hydrogels have good biocompatibility, adjustability, and multifunctionality. By regulating the physical and chemical properties of hydrogel and loading factors or cells, the immune system of the body can be purposively regulated, thus forming an immune microenvironment conducive to osteochondral regeneration.
CONCLUSION
Immunomodulating hydrogels can promote osteochondral repair by affecting the immunomodulation process of host organs or cells. It has shown a wide application prospect in the repair of osteochondral defects. However, more data support from basic and clinical experiments is needed for this material to further advance its clinical translation process.
Hydrogels
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Cartilage
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Bone and Bones
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Tissue Engineering/methods*


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