1.Performance verification of domestic nucleic acid testing system in blood stations based on T/CSBT
Chuanbang ZANG ; Yan WANG ; Li WANG
Chinese Journal of Blood Transfusion 2023;36(9):830-834
【Objective】 To explore the performance verification of the Shengxiang automatic NAT system for HBV DNA, HCV RNA and HIV RNA-1 using PCR-fluorescence in the laboratories of blood stations, in order to meet the requirements of T/CSBT and ensure the quality of nucleic acid detection. 【Methods】 Samples used in the external quality assessment (EQA) of National Center for Clinical Laboratories of the year 2022 were taken to verify the concordance. The standard materials of HBV DNA, HCV RNA and HIV RNA-1 were used to verify the analytical sensitivity, endogenous interfering substances, repeatability, anti-cross contamination ability and stability. 【Results】 The concordance rate of 20 EQA samples was 100%. The analytical sensitivity of HBV DNA, HCV RNA and HIV RNA-1 were all reactive and met T/CSBT. The yielding of HBV DNA, HCV RNA and HIV RNA-1 was affected little with lipemia at 3g/L and hemolysis at 4g/L. The coefficients of variation(CV) of intra-assay and inter-assay which met T/CSBT were all less than 5%, and the intra-assay variation coefficient was less than the inter-assay variation coefficient. The test results of 40 negative samples tested for cross contamination resistance were 100% negative, and 40 positive samples of HBV with 10 000 IU/mL were 100% positive. The stability verification results showed that the detection rate of weak positive samples was 100%. The coefficient of variation of the test results of the reagent after 1 and 5 freeze-thaw cycles were less than 5%,and the difference between the detection Ct value of reagent underwent once freeze-thaw and five-time freeze-thaw was not statistically significant. 【Conclusion】 The analytical sensitivity,endogenous interfering substances, repeatability,anti-cross contamination ability,stability and the compliance rate of domestic Shengxiang Gene automatic NAT system and supporting reagents by PCR-fluorescence method all meet T/CSBT, so it can be used for nucleic acid detection in blood screening in blood station laboratory.
2.Application of phylogenetic information of ITS2 secondary structure in DNA barcoding of Solanum medicinal plant.
Shuo YANG ; Yuan-Yuan XUE ; Mei-Hui LI ; Feng-Xi ZHAO ; Hong ZHAO ; Wei ZHANG
China Journal of Chinese Materia Medica 2017;42(3):456-464
Internal transcript spacer 2 (ITS2) is one of the broadly used standard core barcodes and also the only nuclear barcode in identification of Chinese traditional medicine. Although the DNA barcode method based on ITS2 is popular and has been used in Chinese Pharmacopoeia, its low discriminatory efficiency is still a problem to its extensive application. Therefore, further study is still necessary to explore its phylogenetic information for medicinal plants identification. In cells, ITS2 activity is based on its secondary structure. The secondary structures are particularly useful in phylogenetic analysis because they include information not found in the primary sequence. In this study ITS2 secondary structure of 40 samples from 26 species were predicted and used to explore their utility in addressing the identification problems of Chinese traditional medicine in Solanum. The secondary structures were predicted and aligned, and their consensus models were generated using the three different software of LocARNA, MASTR and PicXAA-R. RNAstat software was used to transform the secondary structures into 28 symbol code data for maximum parsimony (MP) analysis. The results showed that the phylogenetic information increased 88.57% after ITS2 secondary structure information has been added, and then the support values above 50%, 75% and 90% in the tree increased 19.05%, 66.67% and 66.67%, respectively, indicating that the identification of Solanum medical plants has been well resolved. Thus, our analysis suggests that ITS2 secondary structure information should be incorporated into the current DNA barcoding analysis as a beneficial supplement of phylogenetic information.
3.Data analysis of the speed of sound detection of right calcaneus in 224 adults from Guangdong province
Lingju GUAN ; Zhi LI ; Weihai ZHOU
Chinese Journal of Tissue Engineering Research 2007;0(02):-
To obtain the sound speed data of the right calcaneus of adults in different ages in Guangdong province,we measured the speed of sound of right calcaneus of 224 adults aged 20 to 70 years by the OSTEOSPACE type ultrasound bone densitometry(MEDILINK Company in France) .The results showed that the maximum of the right calcaneus speed of sound occurred at the age of 31-40 years in female(1 591.61?38.14) m/s and 21-30 years in male(1 600.66?30.09) m/s.After the right calcaneus speed of sound reached the maximum,it began to decrease with the age in both male and female.The right calcaneus speed of sound decreased significantly at the age of 41-50 years in male,and at 51-60 years in female.The speed of sound in female at the age of 21-30 years is markedly lower than that in male.The experiment indicates that the speed of sound of right calcaneus decreases with age after reaches the peak.That the speed of sound decreases significantly in male is earlier than that in female.
4.The application of septum cartilage in correcting of the unilateral cleft lip nasal deformity.
Lipeng DONG ; Chunling XUE ; Fang DONG ; Yuhu DING ; Rongqiang LI
Chinese Journal of Plastic Surgery 2002;18(1):15-17
OBJECTIVETo explore an ideal method for comprehensive correcting of the unilateral cleft lip nasal defomity.
METHODSThe operation includes replacement of the displaced tissue, excision of the deviated septum, and correction of the deviated septum and the deformity of the lower nose. The excised nasal septum was grafted on the alar base, the nasal columella and the nasal tip.
RESULTS32 patients were treated with this method from 1994 to 1999. Postoperative fellow-up for 1-3 years demonstrated satisfactory results.
CONCLUSIONThrough excision and grafting of the nasal septum, the deviated septum and the deformity of the lower nose are effectively corrected. Complete undermining and replacement of the displaced structure are the basis of correcting the cleft lip nasal deformity.
Adolescent ; Adult ; Cartilage ; transplantation ; Cleft Lip ; surgery ; Female ; Humans ; Male ; Nasal Septum ; transplantation ; Nose ; abnormalities ; surgery
5.EX-PRESS glaucoma drainage device combined with phacoemulsification for cataract patients with acute angle-closure glaucoma and ocular hypertension
International Eye Science 2018;18(12):2235-2237
AIM: To investigate the clinical efficacy and safety of EX-PRESS glaucoma drainage combined with phacoemulsification in the treatment of patients with acute angle-closure glaucoma and ocular hypertension with cataract.
METHODS: Patients with acute angle-closure glaucoma and cataract sustained high intraocular pressure who were admitted to our hospital from January 2016 to January 2017 were enrolled in this study. All patients were treated with EX-PRESS glaucoma drainage device combined with phacoemulsification. The anterior chamber depth before and after operation, intraocular pressure, corrected visual acuity at 1, 4, 8, 12, 24, and 48wk after surgery were performed. The success rate of surgery and intraoperative and postoperative complications were recorded.
RESULTS: The anterior chamber depth of the preoperative patients was 1.974±0.182mm, and that after operation was 2.961±0.175mm. The difference was statistically significant(P<0.01). At 1, 4, 8, 12, 24, and 48wk, the intraocular pressure was significantly lower than that before surgery(P<0.05). The proportion of successful patients at 12, 24, and 48wk after surgery gradually decreased, but the total success rate was 100%. The corrected visual acuity of the patients was significantly improved compared with the preoperative 48wk after operation, and the difference was statistically significant(P<0.05). There were no serious intraoperative and postoperative complications in this group of patients.
CONCLUSION: EX-PRESS glaucoma drainage combined with phacoemulsification is safe and effective in cataract patients with acute angle-closure glaucoma with high intraocular pressure.
6.How Competitive Orientation Influences Unethical Decision-making in Clinical Practices?.
Yali LI ; Taiwen FENG ; Wenbo JIANG
Asian Nursing Research 2018;12(3):182-189
PURPOSE: This study aims to investigate how competitive orientation influences unethical decision-making (UDM) through relationship conflict and the moderating effect of hostile attribution bias. METHODS: This study was conducted using a self-report questionnaire. Data were collected from 727 employees in Chinese hospitals. For each variable, measures were adopted or adapted from existing literature. Data were analyzed using descriptive statistics, correlation analysis, confirmatory factor analysis, and hierarchical regression analysis. Common method variance was established using Harman's single-factor test. RESULTS: Competitive orientation is significantly and positively associated with relationship conflict (β = .36, p < .001) and UDM (β = .35, p < .001). Relationship conflict is significantly and positively associated with UDM (β = .51, p < .001). Relationship conflict partially mediates the relationship between competitive orientation and UDM. In addition, hostile attribution bias strengthens the positive relationship between competitive orientation and UDM through relationship conflict. CONCLUSION: This study provides some implications for hospital employees to deal with ethical dilemmas in decision-making. Hospital employees including nurses, physicians, and other health-care professionals should raise awareness of competitive orientation and adopt a cooperative approach to human relations. Effective training programs should be utilized to direct all hospital employees to depress hostile attribution bias whenever possible to everything in clinical practice.
Asian Continental Ancestry Group
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Bias (Epidemiology)
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Conflict (Psychology)
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Decision Making
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Education
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Ethics, Clinical
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Hostility
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Humans
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Methods
8.Test-retest Reliability of Isokinetic Test for Hip Concentric Flexion and Extension
Junfeng GUO ; Luming LI ; Shunji SHEN ; Kang TIAN ; Ming LEI
Chinese Journal of Rehabilitation Theory and Practice 2018;24(12):1451-1455
Objective To investigate the reliability of isokinetic test for concentric flexion and extension of hip joint. Methods From September, 2014 to June, 2015, 30 healthy young people accepted isokinetic test for concentric flexion and extension of hip twice with the same procedure and method within a week. The intra-class correlation coefficient (ICC) of peak torque, peak torque to body weight, total work, total work to body weight and average power between the two tests was calculated. Results The ICCs were above 0.70 in all the parameters on both sides at 60°/s (P < 0.01). Meanwhile they were above 0.61 of right hip at 180°/s (P < 0.05), but below 0.55 on left (P > 0.05). Conclusion The isokinetic test for hip is reliable for clinical assessment.
9.Expression Level of MiR-146a in Acute Myeloid Leukemia Patients and Its Clinical Significance.
Yi-Li WANG ; Xiu-Zhi DENG ; Chun-Jing TANG ; Xiao-Yi WANG ; Jie YU
Journal of Experimental Hematology 2020;28(4):1171-1176
OBJECTIVE:
To detect the expression of miR-146a in patients with AML, and to evaluate the relationship between miR-146a expression level and clinical characteristics, treatment response, EFS and OS.
METHODS:
154 patients with newly diagnosed AML were enrolled in AML group, 50 controls (patients with thrombocytopenic purpura or voluntary donor of bone marrow) were enrolled in control group. The miR-146a expression levels in bone marrow mononuclear cells was detected by RT-PCR between 2 group. AML patients were treated with chemotherapeutic drugs, and their clinical response and survivals were assessed.
RESULTS:
The expression level of MiR-146a in AML group was significantly lower than that in control group. The ROC showed that miR-146a could distinguish the patients in AML and control group better (area under curve 0.819 (95%CI: 0.761-0.877). Meanwhile, the proportion of good and moderate good prognosis (P<0.001), proportion of WBC count ≤15.2×10/L (P<0.05), CR rate (P<0.05), EFS (P<0.01) and OS (P<0.01) in patients with high miR-146a expression were higher than those in patients with low miR-146a expression. Cox's model showed that miR-146a expression level positively realated with incressed EFS and OS.
CONCLUSION
MiR-146a is downregulated in AML patients, which might be served as a biomarker for predicting risk and prognosis of AML patients.
Bone Marrow
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Humans
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Leukemia, Myeloid, Acute
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MicroRNAs
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Prognosis
10.Analysis of GJB2, SLC26A4, GJB3 and 12S rRNA gene mutations among patients with nonsyndromic hearing loss from eastern Shandong.
Shiyu SUN ; Linyuan NIU ; Jinjun TIAN ; Wei CHEN ; Yanna LI ; Ningning XIA ; Caining JYU ; Xiaoli CHEN ; Chunxiao ZHANG ; Xinqiang LAN
Chinese Journal of Medical Genetics 2019;36(5):433-438
OBJECTIVE:
To explore the characteristics of mutations of four common pathogenic genes (GJB2, SLC26A4, GJB3 and 12S rRNA) among patients with nonsyndromic hearing loss (NSHL) from eastern Shandong.
METHODS:
Peripheral blood samples of 420 NSHL patients were collected, and a hereditary-deafness-gene microarray was used to detect GJB2 c.235delC, c.299-300delAT, c.35delG and c.176del16 mutations, GJB3 c.538C>T mutation, SLC26A4 c.2168A>G and c.IVS7-2A>G mutations, and 12S rRNA c.1555A>C and c.1494C>T mutations. For patients carrying single heterozygous mutations, the coding regions of the above genes were analyzed with Sanger sequencing.
RESULTS:
The results of the microarray assay and Sanger sequencing showed that 84 patients (20.00%) carried GJB2 mutations, with c.235delC (16.43%) and c.299-300delAT (7.86%) being most common. Seventy-five patients (17.86%) carried SLC26A4 mutations, for which c.IVS7-2A>G accounted for 15.71%. In addition, 5.95% of patients carried 12S rRNA mutations. Only one patient was found to carried GJB3 mutation (c.538C>T).
CONCLUSION
Common pathogenic mutations for NSHL in eastern Shandong included GJB2 c.235delC and SLC26A4 c.IVS7-2A>G. Of note, 5.95% of patients were due to 12S rRNA m.1555A>G mutation, which gave a frequency greater than other regions of China.
China
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Connexin 26
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Connexins
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DNA Mutational Analysis
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DNA, Mitochondrial
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Deafness
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Genes, rRNA
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Hearing Loss
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Humans
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Mutation
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RNA, Ribosomal
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Sulfate Transporters