1.Sequence variation and bioinformatics analysis of Toxoplasma gondii GRA16 Gene
Hu, L.Y., Zhang, N.Z., Gao, Q., Chen, J., Wen, F.L., Wang, S.K., Zhu, X.Q.
Tropical Biomedicine 2015;32(3):557-562
Toxoplasmosis is caused by the intracellular protozoan Toxoplasma gondii. It is
anopportunistic zoonosis in warm-blooded animals and humans, with a worldwide distribution.
Toxoplasma gondii dense granule protein 16 (TgGRA16) can modulate some functions in
host cells and is considered a significant virulent factor of the parasite. The present study
reports sequence variation in TgGRA16 gene among T. gondii strains from different hosts and
geographical locations, and the construction of phylogenetic relationships of these T. gondii
strains based on sequences of TgGRA16, and analysis of B cell epitopes in TgGRA16. Our
results showed that all TgGRA16 gene sequences were 1518 bp and the C+G contents ranged
from 52.17% to 52.59%. Sequence variation in the TgGRA16 gene was 0-1.51%. Phylogenetic
analysis revealed that TgGRA16 gene sequence could not be used to differentiate the different
T. gondii genotypes. Six B cell epitopes were predicted in TgGRA16. These results indicated
that TgGRA16 gene is not an ideal marker for studying genetic relationships of T. gondii
isolates, but may represent a good vaccine candidate against toxoplasmosis.
2.Molecular characterization of ascaris from Tibetan pigs by three mitochondrial markers of nad1, cox1 and cox2
Luo, H.Q. ; Zhang, H. ; Li, K. ; Lan, Y.F. ; Wang, X.Q. ; Khalid, M. ; Mujeeb, R. ; Huang, S.C. ; Li, J.K.
Tropical Biomedicine 2017;34(3):576-582
Ascaris is a helminthic parasite, which infects a wide range of host species
causing ascariasis, a predominant disease worldwide. This parasite causes significant economic
losses to the pig industry. The current study was designed to determine the Ascaris nematode
by the genetic characterization of three mitochondrial (mt) genes namely NADH dehydrogenase
subunit 1 (nad1), cytochrome oxidase subunit 1 (cox1) and cytochrome oxidase subunit 2
(cox2). A high infection rate of Ascaris nematode has been found in Tibetan pigs at the
slaughter houses in Tibet Autonomous Region of China. The nad1, cox1 and cox2 genes
sequences collected from adult Ascaris individuals were amplified by polymerase chain
reaction. The cloned-amplicons and the positive products were sequenced and phylogenetic
analysis was performed. The results indicated that the Ascaris infecting the Tibetan pigs
were Ascaris suum (A. suum). This is the first report on the isolation, identification and
genetic characterization of three mitochondrial genomes (nad1, cox1, and cox2) of A. suum
originated from Tibetan pigs at high altitudes in Tibet.