1.Development and application of Real-time PCR assay for detection of Theilera annulata infection in cattle in Xinjiang Uygur Autonomous Region, China
Guo, Q.Y., Cao, W.L., Wang, B.J., Chahan
Tropical Biomedicine 2016;33(1):27-34
Theileria annulata (T. annulata), the causative agent of tropical theileriosis, is a
protozoan parasite that also causes lymphoproliferative diseases in cattle. Development of
reliable and fast methods are necessary in the epidemiological investigation of T. annulata in
ticks and animals. Real-time PCR possesses merits of rapidity, accuracy, reliability, automation
and ease of standardization, which is widely used for the detection of blood borne parasites.
In this study, species-specific primers and TaqMan probe were designed on the basis of the
18s rRNA gene sequence of T. annulata, and the real-time PCR assay was developed by
optimizing the reaction parameter. The performance of real-time PCR was assessed by testing
47 blood samples from cattle and comparing with the results from conventional PCR. The
results show that this real-time PCR assay could specifically detect 10 copies DNA of T.
annulata, which is 10-fold sensitivity more than conventional PCR. No cross-reactions were
observed with Babesia bovis, Babesia bigemina, Trypanosoma evansi and Theileria equi. Of
the 47 field samples collected from Xinjiang Uygur Autonomous Region, China, 36.17% were
detected by real-time PCR, and 25.53% were found positive for T. annulata infection by
conventional PCR. These results indicated that the real-time PCR assay is a useful approach
for detecting T. annulata infections and has potential as an alternative tool for ecological
and epidemiological surveillance of ovine theileriosis.
2.Oral bacteria detection among children with cancer in a tertiary teaching hospital in Kuala Lumpur, Malaysia
Sidi Omar, S.F.N. ; Ngui, R. ; Ab Rahman, S.Z. ; Foo, J.C. ; Wang, Q.Y. ; Hassan, N.A. ; Lim, Y.A.L. ; Musa, S.
Tropical Biomedicine 2021;38(No.3):276-282
This study sought to determine the prevalence of pathogenic and non-pathogenic bacteria in the oral cavities of children with cancer. There were 68 paediatric patients with cancer who were included in this study. Oral swab samples from the dorsum of tongues and mouth floors of these patients were subjected to culture, staining, and molecular methods to detect the bacteria. The overall prevalence of gram-positive and gram-negative bacteria was 79.4% (54/68; 95% CI = 68.4 – 87.3) and 25% (17/68; 95% CI = 16.2 – 36.4), respectively. Streptococcus salivarius and Streptococcus parasanguinis were the predominant pathogenic grampositive bacteria, while Neisseria subflava and Neisseria perflava were the most common pathogenic gram-negative bacteria. The results revealed that the number of bacteria isolates recovered in patients receiving cancer treatment was higher (55.9%) than those who had not received treatment (16.2%). Therefore, more isolated pathogenic bacteria were observed post-therapy (54.4%). Pathogenic organisms can have significant implications on patient health. Awareness of the types of bacteria inhabiting the oral cavity is essential to predict and prevent dental problems, and their associated systemic complications. Findings on the diversity of oral microflora can also provide a better understanding of the aetiology of oral diseases in paediatric patients receiving cancer treatment.