1.Comparative proteomics profiling reveals down-regulation of Staphylococcus aureus virulence in achieving intermediate vancomycin resistance
Xin-Ee Tan ; Hui-min Neoh ; Mee-Lee Loo ; Toh Leong Tan ; Salasawati Hussin ; Longzhu Cui ; Keiichi Hiramatsu ; Rahman Jamal
Malaysian Journal of Microbiology 2016;12(6):498-505
Aims: VraSR and GraSR were shown to be important in conferring intermediate vancomycin resistance in VISA.
Nevertheless, the exact mechanism modulated by these systems leading to the development of VISA remains unclear.
We employed a proteomic approach to determine the VraS and GraR regulons and subsequently derive the possible
vancomycin resistance regulatory pathway(s) in the Mu50 lineage of Staphylococcus aureus.
Methodology and results: Staphylococcus aureus strains Mu50Ω, Mu50Ω-vraSm and Mu50Ω-vraSm-graRm are
isogenic strains with ascending levels of vancomycin resistance. Total proteins were extracted from the 3 strains and
trypsin digested prior to protein isolation and identification by LC-ESI MS/MS and PLGS 2.4. Expression profiles of
resulting proteins were analyzed using Progenesis LC/MS software. Differential expression profiles revealed 3 regulons,
each controlled by VraS (Mu50Ω-vraSm vs Mu50Ω), GraR (Mu50Ω-vraSm-graRm vs Mu50Ω-vraSm) and VraS-GraR
(Mu50Ω-vraSm-graRm vs Mu50Ω), respectively. The regulon down-regulated by VraS in Mu50Ω-vraSm were proteins
associated with virulence (MgrA, Rot, and SarA), while GraR up-regulated resistance-associated proteins (TpiA, ArcB
and IsaA) in Mu50Ω-vraSm-graRm. The VraS-GraR regulon mediated both up-regulation of resistance-associated
proteins (ArgF, ArcB, VraR and SerS) and down-regulation of virulence-associated protein GapB.
Conclusion, significance and impact of study: Down-regulation of virulence- in concert with up-regulation of
resistance-associated proteins appears to be integral for development of intermediate-vancomycin resistance in the
Mu50 lineage of S. aureus.
Staphylococcus aureus
3.Survival of small-cell lung cancer and its determinants of outcome in Singapore.
Chee-Keong TOH ; Siew-Wan HEE ; Wan-Teck LIM ; Swan-Swan LEONG ; Kam-Weng FONG ; Swee-Peng YAP ; Anne A L HSU ; Philip ENG ; Heng-Nung KOONG ; Thirugnanam AGASTHIAN ; Eng-Huat TAN
Annals of the Academy of Medicine, Singapore 2007;36(3):181-188
INTRODUCTIONThe survival and epidemiology of small-cell lung cancer (SCLC) in Singapore has not been described. We aim to present the characteristics as well as determine the survival outcome and important prognostic factors for SCLC patients.
MATERIALS AND METHODSA retrospective analysis of SCLC patients diagnosed from 1999 to 2002 was conducted at the Outram campus, Singapore. Clinical characteristics and treatment data were obtained from case records and survival data were checked with the registry of births and deaths on 30 May 2005.
RESULTSOne hundred and eleven patients were analysed. There were 38 (34.2%) limited-disease (LD) patients and 73 (65.8%) extensive-disease (ED) patients. The majority were current or former smokers (94.7% among LD and 94.5% among ED). More patients with LD had good performance status (92% versus 63%, P = 0.0003) and were treated with combined chemotherapy and radiotherapy (82% versus 48%, P = 0.012). The median survival time of LD patients treated with curative chemoradiotherapy was 14.2 months (95% CI, 10.96 to 17.44). Those given prophylactic cranial irradiation had a median survival time of 16.9 months (95% CI, 11.83 to 21.97). For ED patients, the median survival time was 8.17 months (95%CI, 5.44 to 10.89). None of the factors analysed were significant prognostic factors for LD patients while performance status and type of treatment given were significant among ED patients.
CONCLUSIONSWe found that the characteristics and survival of SCLC patients in Singapore are fairly similar to that of other countries.
Aged ; Carcinoma, Small Cell ; mortality ; therapy ; Combined Modality Therapy ; Female ; Humans ; Lung Neoplasms ; mortality ; therapy ; Male ; Middle Aged ; Prognosis ; Retrospective Studies ; Singapore ; epidemiology
4.The crucial role of molecular testing to facilitate the diagnosis of pneumocystis pneumonia during pregnancy
Chuan Hun DING ; Hamidah YUSOFF ; Najihan Abdul Samat Muttaqillah ; Yee Loong TANG ; Toh Leong TAN ; Petrick PERIYASAM ; Andrea Yu-Lin BAN
The Malaysian Journal of Pathology 2018;40(1):67-72
Pneumocystis pneumonia is an important human immunodeficiency virus (HIV)-associated opportunistic infection, and especially so in pregnant HIV-positive patients. We report a case of a 40-year-old woman in her first trimester of pregnancy who initially presented with acute gastroenteritis symptoms but due to a history of high-risk behaviour and the observation of oral thrush, she was worked up for HIV infection. Her retroviral status was positive and her CD4+ T cell count was only 8 cells/mL. She was also worked up for pneumocystis pneumonia due to the presence of mild resting tachypnoea and a notable drop in oxygen saturation (from 100% to 88%) following brief ambulation. Her chest radiograph revealed bilaterally symmetrical lower zone reticular opacities and Giemsa staining of her bronchoalveolar lavage (BAL) was negative for Pneumocystis jirovecii cysts. However, real-time P. jirovecii polymerase chain reaction (PCR) testing on the same BAL specimen revealed the presence of the organism. A course of oral co-trimoxazole plus prednisolone was commenced and her clinical condition improved.