1.Development and application of a real-time TaqMan RT-PCR assay for detection of duck hepatitis virus type 1
Haiyan LIU ; Lili ZHAO ; Yinjie NIU ; Minghao ZHU ; Shengwang LIU ; Hongyan CHEN
Chinese Journal of Comparative Medicine 2015;(12):71-74,80
Objective To develop a real-time RT-PCR assay ( rRT-PCR) for efficient detection of duck hepatitis virus type 1 ( DHV-I) .Method According to the different gene sequences of DHV-I from different provinces download from NCBI and to find the conserved sequences.One pair of the specific primers and one TaqMan probe were designed. Then reaction parameters were optimized to develop a real-time RT-PCR assay ( rRT-PCR) .Results This developed rRT-PCR assay could detect 20 template copies of RNA, and its sensitivity was higher than that of the conventional RT-PCR. This rRT-PCR assay was found to be specific and able to detect DHV-I, and no positive results were observed when nucleic acid from Muscovy duck parvovirus, goose parvovims, Newcastle disease and avian influenza virus, egg drop syndrome virus, reticuloendotheliosis virus, duck Tembusu virus, poultry intestinal arc virus were used as rRT-PCR templates.The results of this developed rRT-PCR assay used for 100 duck clinical samples showed a positive rate of 92%, indicating that DHV exists in duck group of Jiangsu province in China.Conclusion This rRT-PCR assay can be used as a rapid tool for detection of DHV-I.
2.Cloning and antimicrobial activity of pigeon avian beta-defensin 5.
Shengnan XIN ; Kexing ZHANG ; Mingyue ZHANG ; Zongxi HAN ; Yuhao SHAO ; Xiaoli LIU ; Shengwang LIU ; Deying MA
Chinese Journal of Biotechnology 2012;28(11):1294-1305
The objective of the study was to clone avian beta-defensin (AvBD) 5 gene from pigeon bone marrow tissues and liver tissues, to express the recombinant AvBD5 protein in E. coli, and to determine its antimicrobial activity. The mRNA of duck AvBD5 was cloned from pigeon bone marrow tissues and liver tissues by RT-PCR. In addition, phylogenetic relationships between amino acid sequence of the pigeon AvBD5, AvBDs from other avian species, and some mammalian beta-defensin-5 were analyzed. The cDNA of pigeon AvBD5 was sub-cloned into pGEX-6p-1 vector to construct recombinant plasmid pGEX-pigeon AvBD5. The recombinant protein was expressed into E. coli and purified. Antimicrobial activity and physical-chemical stability of the recombinant fusion protein were measured in vitro. The complete nucleotide sequence of both cDNAs contained 201 bp nucleotides, encoding a polypeptide of 66 amino acids. Both beta-defensins have six conserved cysteines. Phylogenetic relationships were analyzed. Both pigeon AvBDs shared the highest amino acid homology (87.9% and 78.8%) with duck AvBD5. So it was named as pigeon AvBD5alpha (bone marrow) and AvBD5beta (liver). Both recombinant plasmids were transformed into E. coli BL21 and the bacteria were induced with Isopropyl beta-D-1-Thiogalactopyranoside (IPTG). After purification, antibacterial activity of the purified was investigated. In addition, effect of ionic strength on the antibacterial activity, and hemolytic recombinant protein activity of the purified recombinant protein were investigated. A 32 kDa protein was highly expressed. Both purified recombinant pigeon AvBD5alpha and AvBD5beta exhibited extensive antimicrobial activities against 12 bacteria, including Gram-positive and Gram-negative. In high salt ions concentrations, antibacterial activity of both recombinant proteins was decreased. In addition, the hemolysis activity of recombinant protein was extremely low.
Amino Acid Sequence
;
Animals
;
Anti-Infective Agents
;
metabolism
;
pharmacology
;
Avian Proteins
;
biosynthesis
;
genetics
;
pharmacology
;
Cloning, Molecular
;
Columbidae
;
genetics
;
Escherichia coli
;
genetics
;
metabolism
;
Molecular Sequence Data
;
Recombinant Proteins
;
biosynthesis
;
genetics
;
pharmacology
;
beta-Defensins
;
biosynthesis
;
genetics
;
pharmacology
3.Isolation, identification and bioactivity characterization of goose avian beta-defensin 3.
Mingyue ZHANG ; Caiyuan ZHOU ; Zongxi HAN ; Tanhao SHAO ; Shengwang LIU ; Deying MA
Chinese Journal of Biotechnology 2011;27(12):1711-1721
The objective of the study was to clone avian beta-defensin (AvBD) 3 gene from goose tissues, express the recombinant AvBD3 protein in Escherichia coli, and determine its antimicrobial activity. The mRNA of goose AvBD3 was cloned from spleen and bursa of Fabricius of the gooses by RT-PCR. The sequence analysis showed that the genefragment of AvBD3 contained 182 bp, and encoded 60 amino acids. Homology analysis showed that goose AvBD3 shared the highest percentage of amino acid homology (100%) with chicken AvBD3. The cDNA of goose AvBD3 was sub-cloned into BamH I and Sal I sites of pGEX-6p-1 vector to construct recombinant plasmid pGEX-goose AvBD3. The recombinant plasmid was transformed into E. coli BL21 and the bacteria was induced with IPTG It was demonstrated by SDS-PAGE that a 31 kDa protein which was equal to goose AvBD3 protein in molecular weight was highly expressed. The purified recombinant goose AvBD3 exhibited extensive antimicrobial activity against twelve bacteria strains, including Gram-positive and Gram-negative investigated. At high salt ions conditions, antimicrobial activity of recombinant goose AvBD3 protein against both Staphylococcus aureus and Pasteurella multocida decreased significantly. In addition, hemolysis activity of the recombinant protein was extremely low, and the recombinant protein remained antimicrobial activity under different pH values.
Amino Acid Sequence
;
Animals
;
Anti-Bacterial Agents
;
chemistry
;
metabolism
;
pharmacology
;
Cloning, Molecular
;
Escherichia coli
;
genetics
;
metabolism
;
Geese
;
genetics
;
metabolism
;
Molecular Sequence Data
;
Recombinant Proteins
;
biosynthesis
;
genetics
;
pharmacology
;
beta-Defensins
;
genetics
;
isolation & purification
;
metabolism
4.Effects of rhubarb aglycone combined with thrombolysis on brain microvascular basement membrane impairment in rats with thrombus-occluded cerebral ischemia.
Jiansheng LI ; Jingxia LIU ; Dong WANG ; Ke LIU ; Shengwang LIANG ; Jie SUN ; Jing SU ; Ning LI ; Xiaoyan GUO
China Journal of Chinese Materia Medica 2010;35(21):2908-2911
OBJECTIVETo explore the protective effects of rhubarb aglycone combined with urokinase (UK) thrombolysis on brain microvascular basement membrane impairment in rats with thrombus-occluded cerebral ischemia by regulating the expression of IgG, CoLIV and LN in rats brain, by which the level of injury of brain microvascular basement membrane could be detected.
METHODRats were randomly divided into sham-operated, model, thrombolysis, rhubarb aglycone and combination (rhubarb aglycone combined with thrombolysis) groups. Moreover, rats in model, thrombolysis, rhubarb aglycone and combination groups were randomly divided into 3, 6, and 9 h groups respectively. Model of thrombus-occluded cerebral ischemia was duplicated by using the combination of rats' auto-thrombus with inserting the nylon thread. Rats were administrated with thrombolysis therapy through artery at 3, 6, and 9 h after cerebral ischemia. At 24 h of administration through artery, intracranial hemorrhage ratio (ICHR) and mortality of rats were observed, and then the brain of rats was taken. In the study, expression of IgG, CoLIV and LN in rats brain were measured.
RESULTThrombolysis at 9 h of cerebral ischemia made rats mortality and BHR increase, administration of combined therapy could make them decrease. Expression of IgG level in rats brain of 9 h and 6 h model groups increased, while CoLIV and LN expression decreased significantly. In each administration 9 h group, IgG level was lower, and CoLIV and LN were higher, such changes appeared significantly in rhubarb aglycone and association groups.
CONCLUSIONBrain microvascular basement membrane impairment could be caused by the therapy of delayed thrombolysis, which made the mortality and BHR increase. Rhubarb aglycone combined with the therapy of thrombolysis could perform the protective effects on brain microvascular basement membrane and then decrease the ICHR and mortality caused by thrombolysis after cerebral ischemia.
Animals ; Basement Membrane ; blood supply ; drug effects ; Brain Ischemia ; drug therapy ; mortality ; Disease Models, Animal ; Drug Therapy, Combination ; Drugs, Chinese Herbal ; therapeutic use ; Female ; Humans ; Intracranial Thrombosis ; drug therapy ; mortality ; Male ; Random Allocation ; Rats ; Rats, Sprague-Dawley ; Rheum ; chemistry ; Thrombolytic Therapy ; Urokinase-Type Plasminogen Activator ; therapeutic use
5.Epidemiological characteristics and pathogenic analysis of hand,foot,and mouth disease in Hebei province
Zehao LIU ; Le WANG ; Yanyan CAO ; Xiaotong YAN ; Xin ZHAO ; Wenhui LI ; Shengwang GE
Basic & Clinical Medicine 2024;44(9):1279-1283
Objective To identify epidemiological characteristics and pathogen distribution of hand,foot,and mouth disease(HFMD)in Hebei Children's Hospital in order to support prevention and treatment of HFMD.Methods A total of 1 698 cases throat swab samples from children diagnosed as HFMD from 2016 to 2023 were collected.Real-time PCR was used to detect the specific classification of HFMD.Statistical analysis was performed according to the year,season,age,and sex and enterovirus type of HFMD in the children.Results From 2016 to 2023,the ratio of male to female patients among the 1 698 children admitted to Hebei Children's Hospital was 1.72∶1.Among them,the highest incidence rate in summer was 778 cases,accounting for 45.8%of all cases,followed by autumn,with a total of 614 cases,accounting for 36.2%of cases.The highest incidence was recorded in age group of 1-3 years,with a total of 1 032 cases(60.8%).The lowest incidence was 38 cases in age group>6 years old(2.2%);There were 988 cases of HFM(58.2%)caused by different strains of enterovirus undefined(EVU)except enterovirus 71(EV71)and coxsackievirus A16(CA16).Conclusions HFMD found in Hebei Children's Hospital from 2016 to 2023 are mainly caused by enteroviruses except EV 71 and coxsackievirus A16.High morbid-ity is found in children aged 1-3 years,and summer and autumn are the main epidemic seasons.This result may facilitate and support decision making and strategy development in disease prevention and control as well as to strengthen public health resources.
6.Standardized construction of Party branches of university-affiliated public hospitals based on SWOT
Shengwang HAN ; Qian ZHANG ; Gang LIU ; Cui LI ; Shuai SHI ; Zhixin GENG
Modern Hospital 2024;24(2):195-198
Amid ongoing reforms in the healthcare system and the pursuit of high-quality development in public hospi-tals,the significance of party building in leading the standardization of hospital party branches has become increasingly promi-nent.Taking a university's affiliated hospital as an example,this study comprehensively analyzes the current situation of Party building on the standardized construction of party branches within university-affiliated public hospitals using the SWOT method.Meanwhile,this paper proposes targeted strategies by assessing the strengths,weaknesses,opportunities,and challenges of party building leadership.These strategies are intended to refine the framework for the role of Party building in advancing the standard-ized construction of Party branches in university-affiliated public hospitals.
7.Expression of methylenetetrahydrofolate dehydrogenase 1 in pancreatic cancer and its clinical significance
Gongming ZHANG ; Yi LIU ; Wei HU ; Shengwang DU
Chinese Journal of General Surgery 2024;33(9):1488-1498
Background and Aims:Methylenetetrahydrofolate dehydrogenase 1(MTHFD1)is essential in various tumors.However,the role of MTHFD1 in pancreatic cancer remains unclear.This study was conducted to explore the expression and clinical significance of MTHFD1 in pancreatic cancer through bioinformatics analysis and clinical sample validation,as well as to analyze its potential mechanisms of action in pancreatic cancer. Methods:The GEPIA2 online platform was used to analyze the differential expression of MTHFD1,survival,and pathological stage in TCGA pancreatic cancer data,examining the relationship between MTHFD1 expression and clinicopathologic features of pancreatic cancer patients.Univariate and multivariate analyses were performed using the Cox proportional hazards model on TCGA data.GO,KEGG,and GSEA analyses were conducted to predict the possible mechanisms of MTHFD1 in pancreatic cancer.The expression of MTHFD1 in 80 cases of pancreatic cancer and adjacent tissues was detected using immunohistochemistry,qRT-PCR,and Western blot and its expression with clinicopathologic characteristics was analyzed. Results:In the TCGA database,MTHFD1 expression in pancreatic cancer tissues was significantly higher than in normal tissues(P<0.05).High expression of MTHFD1 was significantly associated with poor prognosis in pancreatic cancer patients(P=0.007).TCGA data indicated a close correlation between MTHFD1 expression and tumor stage(P<0.05).MTHFD1 expression was identified as an independent prognostic factor for pancreatic cancer(HR=1.777,P=0.01).GO,KEGG,and GSEA analyses showed that MTHFD1 was related to the cell cycle,and correlation heatmaps indicated a strong association between the MTHFD1 gene and the cell cycle.In the TIMER database,MTHFD1 expression level was significantly correlated with various immune cells,including B cells,CD8+T cells,CD4+T cells,macrophages,neutrophils,and dendritic cells(all P<0.05).The GDSC database revealed that patients with low MTHFD1 expression were more sensitive to various therapeutic agents than those with high expression.In clinical pancreatic cancer specimens,the positive expression rate of MTHFD1 and its mRNA and protein levels were significantly higher in cancer tissues than in adjacent tissues(all P<0.05).MTHFD1 expression was associated with tumor differentiation,clinical stage,lymph node metastasis,and neural infiltration(all P<0.05).Patients with high MTHFD1 expression had significantly shorter overall survival than those with low expression(P<0.05). Conclusion:MTHFD1 is highly expressed in pancreatic cancer tissues and is associated with poor prognosis.It may participate in the occurrence and development of pancreatic cancer through the cell cycle and is related to the infiltration of tumor immune cells.
8.Protective effect of necrostatin1 on the damage of pancreas islet cells induced by TNFα.
Bin YE ; Pengfei RONG ; Liang LIU ; Wei WANG ; Shengwang ZHANG
Journal of Central South University(Medical Sciences) 2020;45(7):752-758
OBJECTIVES:
To investigate whether necrostatin-1 (Nec-1) can protect islet cells from the damage induced by TNF-α.
METHODS:
After isolation and purification, the neonatal porcine islet cell clusters (NICCs) were divided into 3 groups (islets 10 000 IEQ/group): a Nec-1 group (Nec-1+TNF-α was added to the culture medium), a TNF-α group (TNF-α was added to the culture medium), and a control group (pure medium). The number of cells was observed after 48 h of co-culture. The cell death was evaluated by AO/EB staining. Insulin secretion and DNA of islets were detected by chemiluminescence and nucleic acid quantitative analysis. RT-PCR assay was used to examine the mRNA expressions of insulin gene, glueogan gene and somatostatin gene. Flow cytometry analysis was used to detect the viability of B cells.
RESULTS:
The number of islets in Nec-1 group, TNF-α group and the control group were (8 425±2 187), (4 325±778), and (7 122±1 558) IEQ, respectively. Compared to the other two groups, the number of dead cells in TNF-α group was greatly increased. The insulin/DNA values in the Nec-1 group, TNF-α group and blank control group were (13.21±3.15), (2.47±0.45), and (7.44±0.97) mIU/mg, respectively. Compared to the TNF-α group and the control group, the mRNA relative expression levels of insulin gene (6.73±1.07), glucagon gene (10.13±1.98), somatostatin gene (8.57±1.11) were significantly increased in the Nec-1 group (all <0.05), the rate of live cells (97.32±1.87)% and live B cells (90.86±3.68)% were increased significantly in the Nec-1 group (all <0.05).
CONCLUSIONS
TNF-α can induce neonatal porcine islet cells damage, which is attenuated in the presence of Nec-1. Nec-1 can increase the content of endocrine cells in NICCs.
Animals
;
Imidazoles
;
Indoles
;
Insulin
;
Islets of Langerhans
;
Swine
;
Tumor Necrosis Factor-alpha
;
genetics
9. Analysis on viral pathogens in hospitalized children with acute respiratory tract infection from 2014 to 2017 in Shijiazhuang
Lijie CAO ; Jinfeng SHUAI ; Jianhua LIU ; Shengwang GE ; Huibo AN ; Chunming YAN ; Huirong YANG ; Bo NIU
Chinese Journal of Experimental and Clinical Virology 2019;33(4):400-404
Objective:
To investigate the epidemiologic features of respiratory viral etiology in hospitalized children with acute respiratory tract infection (ARTI) in Shijiazhuang.
Methods:
A total of 28 512 cases of hospitalized children with clinical diagnosis of ARTI in Children′ s Hospital of Hebei Province from 2014 to 2017 were recruited into this study. One nasopharyngeal swab was collected from each patient. Immunofluorescence assay was used to detect seven kinds of respiratory viruses, including respiratory syncytial virus (RSV), parainfluenza virus (PIV) type 1-3, influenza virus type A, B (FluA, FluB) and adenovirus (ADV).
Results:
At least one viral pathogen was identified in each of 9 263 out of 28 512 patients and the overall positive rate was 32.5%. Of 9 263 virus-positive patients, 9 070 (97.9%) had mono-infection. The most frequently detected virus was RSV, followed by PIV-3 and FluA. The positive rates of RSV and PIV-1 showed annually decreasing tendency, meanwhile the positive rate of FluA increased in the nearly two years. The detection rate of ADV and PIV-1 increased every other year. There was a significant difference in the positive rate among different years (