1.Investigation of the awareness in laboratory biosafety among teachers and students of medical colleges in Jiangsu Province
Hong LI ; Ruyang ZHANG ; Rencheng ZHAO ; Hongbing SHEN
Chinese Journal of Disease Control & Prevention 2008;0(05):-
Objective To investigate the biosafety-related knowledge level of teachers,technicians and graduate students of medical colleges in Jiangsu province and to explore policy for management of laboratory biosafety in medical colleges.Methods In total of 550 teachers,technicians and graduate students from 5 full-time medical colleges were enrolled using a multiple-stage stratified random sampling method.Each subject was asked to complete questionnaire consisting of laboratory biosafety rules,safety consciousness,route of transmission,waste management and biosafety training,etc.Results The general awareness rate was 54.38%.The percentage of awareness in laboratory biosafety rules,safety consciousness,route of transmission were 27.58%,27.68% and 10.23%,respectively.The awareness rate in reagents toxicity was the lowest(7.21%).However,the awareness rate in protecting rules and waste management were as high as 83.77% and 76.90%,respectively.About 96.30% of the respondents considered that it would be necessary to launch a biosafety course in medical colleges.Conclusions The results showed that the awareness in laboratory biosafety among teachers and students of medical colleges still need to be improved.Propaganda and training of laboratory biosafety should be performed regularly to improve the general awareness and strengthen management.
2.Effect of ventilation with low tidal volume and positive end-expiratory pressure in different periods on postoperative pulmonary function and short-term prognosis in elderly patients with abdominal surgery
Guoxiang FAN ; Guanguo XUE ; Ruyang ZHANG ; Jie SUN ; Zhengnian DING
The Journal of Clinical Anesthesiology 2017;33(9):852-855
Objective To observe the effects of ventilation with low tidal volume and positive end-expiratory pressure (PEEP)in different periods on the postoperative pulmonary function and short-term prognosis in aged patients undergoing abdominal surgery.Methods Sixty aged patients undergoing selective open abdominal surgery scheduled for general anesthesia,21 males and 39 fe-males,were randomized into 3 groups (n =20).Patients in group A received PEEP 1 h after the be-ginning of surgery;patients in group B received PEEP 1 h before tracheal extubation;patients in group C received PEEP intraoperatively.The secretion score in preoperative,postoperative 24 h and 72 h respectively,and the arterial blood gas analysis indexes (PaCO 2 ,PaO 2 ,A-aDO 2 ,PaO 2/FiO 2 calculation)in postoperative 1 h and 24 h were recorded.Results Compared with preoperative,in postoperative 1 h,PaCO 2 increased obviously in all groups,PaO 2 decreased in group B,A-aDO 2 in-creased in group A (P <0.05);in postoperative 24 h,PaCO 2 was significantly increased in group B and C,PaO 2/FiO 2 decreased in group B (P <0.05).Compared with postoperative 1 h,in postopera-tive 24 h,PaCO 2 and A-aDO 2 decreased obviously in group A (P <0.05).There were no differences in postoperative secretions score in between the 3 groups.Conclusion Low tidal volume combined short-range PEEP in different periods of surgery may improve postoperative pulmonary oxygenation. But they had no obvious help with postoperative pulmonary complications.
3.Professor SHAN Zhaowei's Four Methods in the Differentiation and Treatment of Chronic Atrophic Gastritis
Journal of Zhejiang Chinese Medical University 2017;41(11):863-865
[Objective]To explore the clinical experience of professor SHAN Zhaowei treatment of chronic atrophic gastritis(CAG). [Method] To analyze SHAN Zhaowei professor from the perspective of four different pathogenesis of syndrome differentiation of CAG. To sum up professor SHAN Zhaowei 's clinical experience in the treatment of chronic atrophic gastritis, inheritance of Meng He YiPai essence. [Result] Professor SHAN Zhaowei treats CAG in qi, deficiency, blood stasis and toxin from four different pathogenesis to syndrome differentiation of traditional Chinese medicine treatment of CAG, mediation or insufficiency of qi activity, health, and remove stasis coating, detoxification cancer, the first emphasis on TCM four diagnosis, tongue mirror each other, differentiation is exquisite, precision, protecting stomach qi, along with the differentiation to add and subtract, insipid, but with magic effect. [Conclusion] The unique pathogenesis differentiation method in the treatment of CAG and the clinical experience for CAG of Professor SHAN Zhaowei is worth learning and promotion.
4. Application of mendelian randomization methods in causal inference of observational study
Lijuan LIN ; Yongyue WEI ; Ruyang ZHANG ; Feng CHEN
Chinese Journal of Preventive Medicine 2019;53(6):619-624
Mendelian randomization (MR) approach follows the Mendel′s law of inheritance, which is called "Parental alleles randomly assigned to the offspring", and refers to use genetic variants as an instrumental variable to develop causal inference between the exposure factor and the outcome from observational study. In recent years, with the rapid development of genome-wide association study (GWAS) and various omics data,the disclosure of a large number of aggregated data provides an opportunity for the wide application of MR approach in causal inference. We introduce three methods widely used in MR and then apply them to explore causal relationship between blood metabolites and depressive. The advantages and disadvantages of three methods in causal inference are compared in order to provide reference for the application of MR in observational studies.
5.Effect of tiaozhi yanggan decoction in treating patients with non-alcoholic fatty liver.
Can-li GU ; Yun-ke ZHANG ; Yue-xiao FU ; Shao-feng YANG ; Xin-qiang LI
Chinese journal of integrative medicine 2007;13(4):275-279
OBJECTIVETo observe the clinical efficacy and safety of Tiaozhi Yanggan Decoction (TZYGD) in treating non-alcoholic fatty liver.
METHODSOne hundred and thirty-eight patients were enrolled and randomized into two groups according to the random number table in a ratio of 3:1, with 8 cases eventually dropping out. The symptoms, signs, liver function markers, blood lipids, iconographic indices and clinical comprehensive efficacy after a 12-week treatment course were assessed in 101 patients treated with TZYGD in the treated group and 29 patients treated with Thiola in the control group.
RESULTSThe total effective rate in the treated group and the control group was 81.19% and 68.97%, respectively, showing a significant difference between the two groups with the former being significantly higher than the latter (P<0.05). Moreover, the improvements in the symptoms, signs, liver function, blood lipids and iconographic indices in the treated group were favorable with no serious adverse reactions.
CONCLUSIONTZYGD is effective and highly safe in treating non-alcoholic fatty liver.
Adult ; Body Mass Index ; Body Weight ; drug effects ; Drugs, Chinese Herbal ; adverse effects ; therapeutic use ; Fatty Liver ; blood ; drug therapy ; physiopathology ; Female ; Humans ; Lipids ; blood ; Liver ; physiopathology ; Male ; Medicine, Chinese Traditional ; adverse effects ; methods ; Middle Aged ; Phytotherapy ; adverse effects ; Treatment Outcome
6.Application of mendelian randomization methods in causal inference of observational study
Lijuan LIN ; Yongyue WEI ; Ruyang ZHANG ; Feng CHEN
Chinese Journal of Preventive Medicine 2019;53(6):619-624
Mendelian randomization (MR) approach follows the Mendel′s law of inheritance, which is called"Parental alleles randomly assigned to the offspring",and refers to use genetic variants as an instrumental variable to develop causal inference between the exposure factor and the outcome from observational study. In recent years,with the rapid development of genome?wide association study (GWAS) and various omics data,the disclosure of a large number of aggregated data provides an opportunity for the wide application of MR approach in causal inference. We introduce three methods widely used in MR and then apply them to explore causal relationship between blood metabolites and depressive. The advantages and disadvantages of three methods in causal inference are compared in order to provide reference for the application of MR in observational studies.
7.Application of mendelian randomization methods in causal inference of observational study
Lijuan LIN ; Yongyue WEI ; Ruyang ZHANG ; Feng CHEN
Chinese Journal of Preventive Medicine 2019;53(6):619-624
Mendelian randomization (MR) approach follows the Mendel′s law of inheritance, which is called"Parental alleles randomly assigned to the offspring",and refers to use genetic variants as an instrumental variable to develop causal inference between the exposure factor and the outcome from observational study. In recent years,with the rapid development of genome?wide association study (GWAS) and various omics data,the disclosure of a large number of aggregated data provides an opportunity for the wide application of MR approach in causal inference. We introduce three methods widely used in MR and then apply them to explore causal relationship between blood metabolites and depressive. The advantages and disadvantages of three methods in causal inference are compared in order to provide reference for the application of MR in observational studies.
8.Effects of trehalose on oxygen-glucose deprivation and restoration injury in H9C2 cells and the role of SLC7A11-GPX4 signaling pathway
Lijuan ZHANG ; Ruyang TENG ; Xiuyun WU ; Qin ZHAO ; Yanyu LU ; Yikun MAO ; Yu LI
Chinese Journal of Anesthesiology 2024;44(11):1351-1355
Objective:To evaluate the effect of trehalose on oxygen-glucose deprivation and restoration (OGD/R) injury in H9C2 cells and the role of solute carrier family 7 member 11- (SLC7A11)-glutathione peroxidase 4 (GPX4) signaling pathway.Methods:Well-grown H9C2 cells were divided into 4 groups ( n=24 each) by the random number table method: control group (group C), OGD/R group (group O), OGD/R+ trehalose group (group OT) and OGD/R+ trehalose+ erastin group (group OTE). The cells were normally cultured in group C. In O, OT and OTE groups, the DMEM medium was replaced with EBSS medium, the cells were exposed to 5% CO 2-95% N 2 in an incubator at 37 ℃ for 6 h, and then the medium was replaced with DMEM medium supplemented with 6% fetal bovine serum to restore oxygen and glucose supply for 24 h. In group OT, trehalose at a final concentration of 50 mmol/L was added during restoration of oxygen and glucose supply. In group OTE, the SLC7A11 inhibitor erastin at a final concentration of 10 μmol/L was added at 8 h before oxygen-glucose deprivation, and trehalose at a final concentration of 50 mmol/L was added during restoration of oxygen and glucose supply. The cell viability, lactic dehydrogenase (LDH) activity, contents of glutathione (GSH), malondialdehyde (MDA) and iron, and reactive oxygen species (ROS) levels were measured at 24 h of restoration of oxygen and glucose supply. The expression of SLC7A11, GPX4, long-chain fatty acyl coenzyme A synthetase 4 (ACSL4), and ferritin heavy chain 1 (FTH1) was detected by Western blot. The structure of the mitochondrial morphology was observed with a transmission electron microscope. Results:Compared with group C, the cell viability and GSH content were significantly decreased, the LDH activity, contents of MDA and iron, and ROS level were increased, the expression of SLC7A11, GPX4 and FTH1 was down-regulated, and the expression of ACSL4 was up-regulated in group O ( P<0.05). Compared with group O, the cell viability and GSH content were significantly increased, the LDH activity, contents of MDA and iron, and ROS level were decreased, the expression of SLC7A11, GPX4 and FTH1 was up-regulated, and the expression of ACSL4 was down-regulated in group OT ( P<0.05). Compared with group OT, the cell viability and GSH content were significantly decreased, the LDH activity, contents of MDA and iron, and ROS levels were increased, the expression of SLC7A11, GPX4 and FTH1 was down-regulated, and the expression of ACSL4 was up-regulated in group OTE ( P<0.05). Conclusions:Trehalose can inhibit ferroptosis by activating the SLC7A11-GPX4 signaling pathway, thereby attenuating OGD/R injury in H9C2 cells.
9.Statistical methods for extremely unbalanced data in genome-wide association study (1)
Ning XIE ; Wenjian BI ; Zhongwen ZHANG ; Fang SHAO ; Yongyue WEI ; Yang ZHAO ; Ruyang ZHANG ; Feng CHEN
Chinese Journal of Epidemiology 2024;45(11):1582-1589
Extremely unbalanced data here refers to datasets where the values of independent or dependent variables exhibit severe unbalance in proportions, such as extremely unbalanced case-control ratio, very low incidence rate of disease, heavily censored time-to-event data, and low-frequency or rare variants. In such scenarios, the statistic derived from hypothesis test using the classical statistical method, e.g., logistic regression model and Cox proportional hazard regression model, might deviate from theoretical asymptotic distribution, resulting in inflation or deflation of type I error. With the increased availability and exploration of resources from large-scale population cohorts in genome-wide association study (GWAS), there is a growing demand for effective and accurate statistical approaches to handle extremely unbalanced data in independent and non-independent samples. Our study introduces classical statistical methods in genetic statistics firstly, then, summarizes the failure of classical statistical methods in dealing with extremely unbalanced data through simulation experiments to draw researchers' attention to the extremely unbalanced data in GWAS.
10.Gene-age interaction study of breast cancer prognosis based on epigenomic data
Tianlin ZHOU ; Maojie XUE ; Zhixiang DAI ; Ruyang ZHANG ; Feng CHEN
Chinese Journal of Epidemiology 2024;45(7):1007-1013
Objective:Exploring gene-age interactions associated with breast cancer prognosis based on epigenomic data.Methods:Differential expression analysis of DNA methylation was conducted using multiple independent epigenomic datasets of breast cancer from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO). The false discovery rate (FDR) method was used for multiple corrections, retaining differentially methylated sites with q-FDR≤0.05. A three-stage analytic strategy was implemented, using a multivariable Cox proportional hazards regression model to examine gene-age interactions. In the discovery phase, signals with q-FDR ≤ 0.05 were screened out using TCGA-BRCA database. In validation phaseⅠ, the interaction was validated using GSE72245 data, with criteria of P≤0.05 and consistent effect direction. In validation phaseⅡ, the signals were further validated using GSE37754 and GSE75067 data. A prognostic prediction model was constructed by incorporating clinical indicators and interaction signals. Results:The three-stage analytic strategy identified a methylation site (cg16126280 EBF1), which interacted with age to jointly affect the overall survival time of patients (interaction HR= 1.001 1,95% CI:1.000 7-1.001 5, P<0.001). Stratified analysis by age showed that the effect of hypermethylation of cg16126280 EBF1 was completely opposite in younger patients ( HR=0.550 5, 95% CI: 0.383 8-0.789 6, P=0.001) and older patients ( HR=2.166 5, 95% CI: 1.285 2-3.652 2, P=0.004). Conclusions:The DNA methylation site cg16126280 EBF1 exhibits an interaction with age, jointly influencing the prognosis of breast cancer in a complex association pattern. This finding contributes new population-based evidence for the development of age-specific targeted drugs.