1.A microbiological survey on hygiene of street - food in Hue city
Journal of Preventive Medicine 2002;12(2):41-47
80 samples of street-food (40 samples of raw vegetable, 40 samples of cooked food) were examined at 4 places of crowed eating in Hue city. The infection of aerobic bacterium, total coliform, faecal coliform all were at very high concentration, highly-polluted level. 6 species of S.aureus and 3 species of NAG were isolated, 62.5% samples of cooked food and 100% samples of raw food were did not meet the sanitary standards, which leads to high risks of food poisoning due to infection
Hygiene
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Microbiological Techniques
5.Recent progress in photosynthetic microbial co-culture systems.
Li ZHANG ; Xinyu SONG ; Lei CHEN ; Weiwen ZHANG
Chinese Journal of Biotechnology 2020;36(4):652-665
Co-culture systems consisted of photosynthetic microorganisms and others heterotrophic microbes have attracted great attention in recent years. These systems show many advantages when compared with single culture grown under autotrophic conditions, such as less vulnerable to pollution and more stability, thus have been applied to wastewater treatment, soil remediation, biodegradable harmful substances, and production of high value-added products. In order to explore basic theory and further applications, we summarize here recent progresses in artificial co-culture systems of using photosynthetic microorganisms, to provide a current scientific understanding for the rational design of the co-culture system based on photosynthetic microorganisms using synthetic biology.
Coculture Techniques
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Heterotrophic Processes
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Microbiological Techniques
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trends
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Microbiota
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physiology
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Photosynthesis
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physiology
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Synthetic Biology
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trends
6.Evaluation of an Automated Instrument, PREVI Isola(R) for Inoculation of Body Fluids and Urine Samples onto Agar Plates.
Yoonjung KIM ; Seoyoung YOON ; Young Sook SOHN ; Yangsoon LEE ; Hae Sun CHUNG ; Woonhyoung LEE ; Dongeun YONG ; Seok Hoon JEONG ; Kyungwon LEE ; Yunsop CHONG
Laboratory Medicine Online 2011;1(2):105-109
BACKGROUND: In most clinical microbiology laboratories, inoculation of specimens on plates is performed manually and is a time-consuming process. The efficiency of this process can be improved by using an automated instrument. Currently, several automated instruments have been introduced for inoculation of samples. In this study, we have evaluated an automated instrument, PREVI Isola(R) (Biomerieux, France), used for inoculation of body fluids and urine specimens. METHODS: Both manual and automated instrument methods were used to inoculate 74 body fluid and 204 urine samples. Precision was evaluated by testing 3 types of urine samples (A, 6x10(3) colony-forming units (CFU)/mL; B, 3x10(4) CFU/mL; and C, >10(6) CFU/mL) in replicates of 20. Results of the 2 methods were compared by counting the isolated colonies on agar plates after incubation. The time required for both methods was also compared. RESULTS: The coefficient of variation (CV) of samples A, B, and C examined using the automated instrument method was 176.1%, 18.1%, and 12.6%, respectively. The sensitivity and specificity of testing body fluid samples were 77% and 100%, respectively, and those of urine samples were 87% each. The time required for testing 15 body fluid specimens and that for inoculation of each specimen was 9.7 min shorter using PREVI Isola(R) than using the manual method. CONCLUSIONS: The results of body fluid and urine culture by inoculation using the automated instrument, PREVI Isola(R), showed relative good agreement with those obtained using the manual method. The use of PREVI Isola(R) would be expected to reduce the time and labor involved in inoculating various kinds of specimens.
Agar
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Automation, Laboratory
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Body Fluids
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Microbiological Techniques
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Sensitivity and Specificity
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Stem Cells
7.Culture conditions optimization and high cell density fermentation of recombinant bacteria producing heparinase II from Flavobacterium heparinum.
Bin ZHOU ; Yongmei CHENG ; Chao DENG ; Weichao LIU ; Chaoliang CHEN ; Jinghua CHEN ; Zhenghong XU
Chinese Journal of Biotechnology 2014;30(4):674-678
Heparinase II (Hep II) from Flavobacterium heparinum is an enzyme that could specifically cleave certain sequence of heparin and heparan sulfate. In this work, fermentation conditions of recombinant heparinase II (His-Hep II) producing bacteria were optimized, including initial induction time, inducer (IPTG) concentration, induction temperature and induction time. The optimum conditions were as follows: cultivating recombinant bacteria to exponential prophase under 37 degrees C, then adding IPTG to a final concentration of 0.3 g/L, finally cultivating recombinant bacteria under 20 degrees C for 10 h. The total crude enzyme activity reached 570 U/L. Based on these results, high cell density fermentation of recombinant bacteria was studied. The final OD600 could reach 98 and the total crude enzyme activity of His-Hep II increased to 9 436 U/L.
Fermentation
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Flavobacterium
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metabolism
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Microbiological Techniques
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Polysaccharide-Lyases
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biosynthesis
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Recombinant Proteins
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biosynthesis
9.A genetic optimization designing method for microorganism detection genechip probe based on genetic algorithm.
Guo-Chuan LIU ; Zhi-Jun BAI ; Wen-Jie SHU ; Xiao-Chen BO ; Sheng-Qi WANG ; Lin LU ; Jia-Yong WANG
Chinese Journal of Medical Instrumentation 2008;32(2):89-92
A new automatic selection approach of microorganism specific fragment combination is presented in this paper. Genetic algorithm is used to search optimal solution on the basis of classification ability of SNP combination, which is evaluated by the rough set theory. Other related experimental parameters are also been incorporated. Experimental results show that the method can find the best SNP combination pattern efficiently and accurately, which implies that it is a reliable approach to the genechip probe design.
Algorithms
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Microbiological Techniques
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methods
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Models, Genetic
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Oligonucleotide Array Sequence Analysis
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methods
10.Aptamers: characteristics and applications in pathogenic microorganism.
Hongru LIANG ; Songtao YANG ; Tao ZHANG ; Guiqiu HU ; Xianzhu XIA
Chinese Journal of Biotechnology 2011;27(5):698-703
Aptamers are a group of artificial oligonucleotides identified by exponential enrichment system evolution technology (Selective expansion of ligands by exponential enrichment, SELEX). Aptamers have been widely used in basic research, clinical diagnostics, and nano-technology. In this article we will introduce the technology of aptamer and summarize its applications in medical microbiology.
Aptamers, Nucleotide
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biosynthesis
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genetics
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Microbiological Techniques
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methods
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Microbiology
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SELEX Aptamer Technique
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methods
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trends