1.A Comprehensive Software Suite for the Analysis of cDNAs
Arakawa KAZUHARU ; Suzuki HARUO ; Fujishima KOSUKE ; Fujimoto KENJI ; Ueda SHO ; Matsui MOTOMU ; Tomita MASARU
Genomics, Proteomics & Bioinformatics 2005;3(3):179-188
We have developed a comprehensive software suite for bioinformatics research of cDNAs; it is aimed at rapid characterization of the features of genes and the proteins they code. Methods implemented include the detection of translation initiation and termination signals, statistical analysis of codon usage, comparative study of amino acid composition, comparative modeling of the structures of product proteins, prediction of alternative splice forms, and metabolic pathway reconstruction.The software package is freely available under the GNU General Public License at http://www.g-language.org/data/cdna/.
2.Objective Assessment of Erythema caused by Metal Patch Testing using an Erythema Index Meter
Atsushi Takada ; Masaru Fujimoto ; Ken-ichiro Ukichi ; Mitsuaki Morimoto ; Morio Tonogi ; Gen-yuki Yamane ; Shin-ichi Takahashi
Oral Science International 2010;7(2):56-65
The patch test is the most reliable method for diagnosing a metal allergy. However, interpretation of patch test results depends on the experience of the investigator and on the conditions of the individual patient. In the case of patch tests for metal salts, irritant reactions such as pustular or follicular reactions are quite common. Therefore, one must be careful not to interpret irritant reactions as allergic responses, and objective standards to evaluate erythema in patch tests need to be established.In the present study, we attempted to objectively evaluate patch test results for metal salts using an erythema index meter. We used the Erythema Index Difference (EID) (patch test site erythema index (EI) minus the mean EI of healthy skin outside the patch test area and at the unit tape site) rather than the EI itself in order to eliminate the effects of the patch test unit and individual differences. We measured the EID over time in patients with suspected metal allergies to various metals. Significant differences in EID were observed among ++ assessments, + assessments and irritant reactions based on International Contact Dermatitis Research Group (ICDRG) standards. In considering changes in EID over time, allergic and irritant reactions can be discriminated with high sensitivity (73.3%) and specificity (91.2%).These results suggest that the measurement of erythema over time with an erythema index meter is useful for the objective assessment of metal patch test reactions.