1.Implementation and methodology of a pilot, localized video library of cataract surgeries for residency training in a tertiary Philippine Eye Institute
Luis Miguel G. Aquino ; Richard C. Kho
Acta Medica Philippina 2023;57(2):38-43
Objectives:
Video-based learning of surgical skills is a useful complement in training programs. This is more evident where direct patient exposure is limited due to multiple factors. In ophthalmic surgery, access to high quality ocular surgery videos such as for cataract operations, can provide significant learning points for trainees in an institutional program. Creation therefore of a local, curated, and indexed library of cataract surgery would support alternative means to maximize training of new ophthalmic surgeons. The objective of the project was to develop a local library of cataract surgery videos as an adjunct teaching tool for resident trainees in a Philippine tertiary eye care center.
Methods:
A collection of cataract surgery videos from 2013-2020 were compiled into a single workstation. Videos were reviewed and catalogued using set keywords for easy searchability and labelling.
Results:
256 videos of cataract surgeries were compiled into the library. 6 main headings for the keywords, with 159 total subheadings were established to provide robust tagging and search options to index the video.
Conclusion
Particularly in Ophthalmic surgery, refinement of surgical technique is essential in ensuring better postoperative visual outcomes. This is achieved through repetition and careful dissection of operative technique. The use of a library with multiple videos of a similar procedure allows trainees more exposure to certain cases. This ultimately affords trainees, better experience and confidence in their own surgeries.
Cataract
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Library
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Surgery
2.Production of the monoclonal antibody and the genomic library of helicobacter pylori.
Kwang Ho RHEE ; Woo Kon LEE ; Seung Chul BAIK ; Myung Je CHO ; Hyu Jin CHOI
Journal of the Korean Society for Microbiology 1991;26(4):305-316
No abstract available.
Genomic Library*
;
Helicobacter pylori*
;
Helicobacter*
3.Advances of metagenomics in discovering novel biocatalysts.
Kui WANG ; Sidi WANG ; Rui HUANG ; Yuhuan LIU
Chinese Journal of Biotechnology 2012;28(4):420-431
Microorganisms contain a large number of biocatalysts, which are of great potential in industrial applications. However, the traditional cultural approaches can obtain only less than 1% of microorganisms. As a culture-independent method, metagenomics is an advanced solution by means of extracting all microbial genomic DNAs in certain environmental habitat, constructing and screening metagenomic libraries to seek novel functional genes. It serves as an effective tool for studying these uncultured microorganisms. Therefore, mining novel biocatalysts from metagenome has drawn the attention of researchers in the world. In this paper, environment sample category, genomic DNA extraction, library construction and screening strategies were reviewed. Recent examples of isolated biocatalysts from metagenomic libraries were presented. Future research directions of metagenomics were also discussed.
Biocatalysis
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DNA
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Genomic Library
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Metagenomics
;
trends
4.Phage antibody library technology in tumor therapy: a review.
Xiaoyang CHEN ; Ruiheng AN ; Ju HUANG ; Youfeng LIANG ; Wenjing ZHANG ; Mingxuan HAO ; Rui GUO ; Xiaoning LI ; Yongchao LI ; Lu YING ; Zhao YANG
Chinese Journal of Biotechnology 2023;39(9):3644-3669
Tumor is a serious threat to human health. At present, surgical resection, chemoradiotherapy, targeted therapy and immunotherapy are the main therapeutic strategies. Monoclonal antibody has gradually become an indispensable drug type in the clinical treatment of cancer due to its high efficiency and low toxicity. Phage antibody library technology (PALT) is a novel monoclonal antibody preparation technique. The recombinant immunoglobulin variable region of heavy chain (VH)/variable region of light chain (VL) gene is integrated into the phage vector, and the antibody is expressed on the phage surface in the form of fusion protein to obtain a diverse antibody library. Through the process of adsorption-elution-amplification, the antibody library can be screened to obtain the antibody molecule with specific binding antigen as well as its gene sequence. PALT has the advantages of short antibody production cycle, strong plasticity of antibody structure, large antibody yield, high diversity and direct production of humanized antibodies. It has been used in screening tumor markers and preparation of antibody drugs for breast cancer, gastric cancer, lung cancer and liver cancer. This article reviews the recent progress and the application of PALT in tumor therapy.
Humans
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Bacteriophages/genetics*
;
Immunoglobulin Variable Region/genetics*
;
Gene Library
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Antibodies, Monoclonal/therapeutic use*
;
Immunotherapy
;
Peptide Library
5.PubMed's revamped management system is paying off.
Journal of Periodontal & Implant Science 2017;47(2):64-65
No abstract available.
PubMed
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Information Management
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Information Storage and Retrieval Workflow
;
National Library of Medicine
6.Indexing the Korean Journal of Radiology by the Institute for Scientific Information for SCI-Expanded and by the National Library of Medicine for Index Medicus/MEDLINE.
Journal of Korean Neuropsychiatric Association 2003;42(5):541-543
A journal indexed by the Institute for Scientific Information for SCI-expanded and by the National Library of Medicine for Index Medicus/MEDLINE is important to be recognized internationally. The Korean Journal of Radiology has been indexed in the database of the SCI-expanded since 2001 and Medicus/MEDLINE since 2000. The criteria for journal evaluation and selection by the National Library of Medicine include quality of editorial work, production quality, and quality of content. Most of the candidate journals contain reasonably good quality in editorial work and production. Thus, we believe that the quality of content is the most important criteria for the journal selection. To maintain a good quality of content, selection of the manuscript containing originality and scientific merits is imperative in review process. Highly selected, small number of articles per issue would be a wise editorial policy for a journal to be indexed by the well-known database.
Abstracting and Indexing as Topic*
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Editorial Policies
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National Library of Medicine (U.S.)*
7.Systematic Evaluation on the Quantitative and Qualitative Aspects of Korean Nutrition Education Websites.
Hong Seok AHN ; Bon Suk KU ; Seungmin LEE
Journal of the Korean Dietetic Association 2008;14(3):218-228
This study was conducted to evaluate the quantitative and qualitative aspects of Korean websites related to nutrition education. A total of 30 websites were ultimately selected through 4 major Internet search engines, including Naver, Yahoo, Daum, and Nate, using several key words (i.e., nutrition education, dietary life education, nutrition information, nutrition management, etc.). A systematic review was conducted for each of the selected websites based on the American Library Association (ALA) website checklist and a data abstract form that was adapted from a previous study. Approximately two thirds of the websites were established between 2002 and 2005, and 46.6% were administrated by public health centers or schools/colleges. The most frequently targeted group was the generally healthy population (30.0%). Among the various topics of nutrition information provided, "balanced diet" was the topic most often provided by the websites. Also, an increasing trend for utilizing multimedia tools was observed; however, little technical support or instruction was provided by the websites. Only 50.0% and 63.3% of the sites clearly stated their operators and sources of provided information, respectively. Overall, the purposes of sites were clearly stated, and were not overshadowed by advertising. And most features of design, stability, and content were found to be appropriate, but several aspects, such as establishing a help/FAQ menu, regularly updating nutrition information, and converting provided information into a database for easier search and update, needed improvement. In addition, active operational strategies are greatly needed to encourage the application of materials found on sites into real educational settings.
Checklist
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Internet
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Library Associations
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Multimedia
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Public Health
;
Search Engine
8.Construction of cDNA library from NPC tissue and screening of antigenic genes.
Jun SHU ; Guan-Cheng LI ; Xiao-Juan HE
Chinese Journal of Biotechnology 2004;20(1):54-58
To obtain the NPC-associated antigens, a powerful new method, SEREX (serological identification of antigen by recombinant cDNA expression library), was used for identifying the antigens eliciting humoral immune response. Before performing serological analysis, a high quality cDNA library derived from human nasopharyngeal carcinoma (NPC) tissue was constructed. The primary library consisted of 3.64 x 10(6) recombinants and the recombinant rate was 94%. For better preserving the cDNA library, it was amplified. As a result, the titer of the amplified cDNA library was 3.8 x 10(9) pfu/mL. With SEREX method, immunoscreening for the detection of reactive clones in the human NPC tissue cDNA library was performed with autologous serum. As a result, 23 positive clones encoding antigenic genes were obtained after immunoscreening, and the nucleotide sequences of cDNA inserts were determined and analyzed with BLAST software in GenBank. Results showed that the 23 reactive clones were derived from 16 different genes. 10 of 16 genes had high homologous to the genes known in GenBank, such as RPL31, S100 A2, MT2A, etc. However, there were also 6 genes with low homology to the genes known in GenBank. Furthermore, 3 of 6 genes may be novel genes. The associations of these genes to NPC and the roles that they played in the occurrence and development of NPC should be revealed by further research.
Antigens, Neoplasm
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genetics
;
Gene Library
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Humans
;
Nasopharyngeal Neoplasms
;
genetics
;
immunology
9.Utilizing tabacco genomic DNA to construct nearly random peptide libraries.
Su-Can MA ; Hai-Ming HUANG ; You-He GAO
Chinese Journal of Biotechnology 2005;21(2):332-335
We developed a novel method for constructing nearly random peptide library. Genomic DNAs extracted from tissue or cells of large genome species were digested with frequent cutter to produce short DNA fragments. These short fragments can be considered nearly random. Nearly random peptide libraries can be constructed by cloning the short fragments into appropriate expression vectors and transformation into host cells. Genomic DNA from one species can be digested with different restriction enzymes and ligated to different reading frames to produce several different libraries. In this study, we digested tobacco genomic DNA with two enzymes and cloned into three different reading frames to make totally six nearly random peptide libraries.
DNA, Plant
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genetics
;
Genome, Plant
;
genetics
;
Peptide Library
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Tobacco
;
genetics