1.Fusarium species isolated from forest soil samples
Latiffah ; Zakaria ; Ruzanna Shazwani Azaman
Malaysian Journal of Microbiology 2011;7(3):171-174
A total of 46 isolates of Fusarium were isolated from six forest soil samples in Muka Head, Teluk Bahang, Pulau Pinang. Two Fusarium species were identified from the soil samples namely, F. solani (93.5%) and F. oxysporum (6.5%). The present study showed that the diversity and occurrences of Fusarium species in forest soil was low compared to cultivated soils.
2.Fusarium species Associated with Fruit Rot of Banana (Musa spp.), Papaya (Carica papaya) and Guava (Psidium guajava)
Latiffah Zakaria ; Mazzura Wan Chik ; Kong Wai Heng ; Baharuddin Salleh
Malaysian Journal of Microbiology 2012;8(2):127-130
A total of 60 isolates of Fusarium were isolated from fruit rot of banana (Musa spp.), papaya (Carica papaya) and guava (Psidium guajava). The most common species recovered from the fruit rot of the three fruit crops were F. semitectum (40 %), F. solani (38.3 %), F. verticillioides (11.7 %) and F. oxysporum (10 %). Fusarium semitectum was isolated from fruit rot of banana, papaya and guava; F. oxysporum from banana and papaya; F. solani from banana and guava and F. verticillioides from banana. From pathogenicity tests, F. solani and F. semitectum were pathogenic to both banana and papaya and F. verticillioides to banana. F. oxysporum was not pathogenic to banana and papaya and F. semitectum was not pathogenic to guava. The results of the present study showed the presence of several Fusarium spp. on fruit
rot of banana, papaya and guava and several species are found to be pathogenic causing fruit rot on their hosts.
3.Occurrence of microfungi on several dried fruits
Latiffah Zakaria ; Lim Choong Yee ; Teh Li Yee
Malaysian Journal of Microbiology 2015;11(3):313-316
Aims: Dried fruits may harbour a variety of fungi especially those that can grow in low water activity conditions.
Knowledge on the occurrence of fungi on dried fruits is an important step to predict the possibility of mycotoxin
contamination, thus the present study was conducted to determine the occurrence of fungi on dates, figs, kiwi and
raisins.
Methodology and results: Based on morphological characteristics, six genera of fungi comprising eight species,
Aspergillus niger, A. flavus, Penicillium corylophilum, P. glabrum, Chaetomium globosum, Fusarium sacchari,
Acremonium strictum and Mycelia sterilia were identified. Three most commonly species isolated were A. niger (19
isolates), P. corylophilum (seven isolates) and A. flavus (five isolates). The less common species were C. globosum
(three isolates), Mycelia sterilia (three isolates), A. strictum (one isolate) and P. glabrum (one isolate).
Conclusion, significance and impact of study: Common mycotoxin producer are the fungi from the genera
Aspergillus, Penicillium and Fusarium. The occurrence of toxigenic fungi on dates, figs, kiwi and raisins suggested that
some of these fungi may be an important source of mycotoxin contamination.
Fungi
4.Aspergillus species from groundnuts (Arachis hypogaea) and mycotoxin production by toxigenic species
Amalina Kamaruddin ; Latiffah Zakaria
Malaysian Journal of Microbiology 2019;15(6):471-479
Aims:
Groundnut is an important food crop and is susceptible to contamination by Aspergillus. The present study was conducted to identify Aspergillus spp. from groundnuts as well as to detect mycotoxin production by toxigenic species.
Methodology and results:
Molecular identification using ITS region, β-tubulin and calmodulin genes identified six species, A. niger, A. tubingensis, A. flavus, A. aculeatus, A. sydowii and A. fumigatus. Phylogenetic tree of combined sequences showed the isolates from the same species were grouped with reference strains in the same clade, thus the species identity was confirmed. Detection of mycotoxin biosynthesis genes can give an indication of mycotoxin production. Two ochratoxin A genes, PKS15KS and PKS15C-MeT were detected in seven A. niger isolates but none of the isolates produced ochratoxin A when quantification was conducted using Ultra-High Performance Liquid Chromatography. Two aflatoxin B1 biosynthesis genes, Nor-1 (norsolorinic acid) and Ver-1 (Versicolorin) genes were detected in A. flavus but only KDH7 and KL27b isolates produced aflatoxin B1 with concentrations of 1.0 μg/g and 1.1 μg/g, respectively.
Conclusion, significance and impact of study
Various species of Aspergillus found on groundnuts may lead to potential mycotoxin contamination as toxigenic species were also recovered. The occurrence of Aspergillus spp. can reduce the quality of the legumes as well as reducing their shelf life.
5.Characterization of two xerophilic Aspergillus spp. from peanuts (Arachis hypogaea)
Nur Amalina KAMARUDIN ; Latiffah ZAKARIA
Malaysian Journal of Microbiology 2018;14(1):41-48
Aims: Xerophilic Aspergillus spp. promote the growth of toxigenic species. Since mycotoxins are toxic to human andanimal, identification of these species is important.Methodology and results: Two xerophilic species isolated from peanuts (Arachis hypogaea) were identified based onmorphological characteristics, molecular identification, and phylogenetic analysis using internal transcribed spacerregion, β-tubulin, and calmodulin sequences.Conclusion, significance and impact of study: The occurrence of A. chevalieri and A. amstelodami on peanutsprovides favorable growth conditions for less xerophilic Aspergillus as well as other spoilage-related fungal genera,particularly mycotoxin-producing species that could lead to mycotoxin contamination. The occurrence of A. chevalieriand A. amstelodami on peanuts might also reduce shelf life and affect the quality of the kernels. To our knowledge, thisis the first report of the occurrence of A. chevalieri and A. amstelodami on a food product in Malaysia, and the finding ofthis study contributes to the repertoire of Aspergillus species that are associated with food products.
6.The pathogen and control management of rice blast disease
Latiffah Zakaria ; Norsuha Misman
Malaysian Journal of Microbiology 2018;14(7):705-714
Abstracts
Outbreak of rice blast disease is a serious problem in all rice growing regions worldwide and is a threat to rice production. In Malaysia, the outbreak of rice blast is a recurrent problem where rice plant remain vulnerable to the disease. Nowadays, the generic name of rice blast pathogen is Pyricularia oryzae and Magnaporthe oryzae is the synonym. Rice pathogen infects mainly aerial parts of rice plant causing rotting and blast on the leaves, stems, peduncles, panicles and seeds leading to crop failure. Rice blast pathogen population is regarded as highly variable and consisted of multiple pathotypes which contribute to genetic diversity as well virulence diversity of the pathogen. The pathotypes can only be determined through pathogenicity test using a set of differential rice cultivars which generally differ by one or more resistance genes. Knowledge on the rice blast virulence and host resistant is important to manage the disease. Among the control methods, utilizing resistant cultivars is considered as the most effective approach to manage rice blast disease. Therefore, development of blast resistant cultivar becomes a priority.
7.Colletotrichum spp. associated with agricultural crops in Malaysia, causal pathogens and potential control methods
Malaysian Journal of Microbiology 2020;16(6):530-544
ABSTRACT
Colletotrichum is one of the most significant and common plant pathogens, infecting many economically important crops
worldwide. Colletotrichum is also one of the most studied fungal genera in Malaysia because it contains many species
that infect various types of agricultural crop including fruit, vegetable and industrial crops. Studies on Colletotrichum spp.
are mostly focused on the causal pathogens, the host range and disease management. Among the host crops, most
studies on Colletotrichum spp. have been conducted on infection in chilli (Capsicum spp.), which, in Malaysia, first arose
in the 1980s and still continues to be a problem to this day. Studies have also been conducted on Colletotrichum spp.
associated with anthracnose in fruit crops including dragon fruit, papaya, banana and mango. Disease management of
anthracnose pathogens postharvest has also been conducted to prolong the shelf life of these fruit crops. In this review,
Colletotrichum spp. associated with chilli and several fruit crops as well as their disease management are highlighted.
There have been many changes in Colletotrichum taxonomy and systematics in recent years, affecting the identification
of anthracnose pathogens reported in Malaysia. Colletotrichum species identified solely by morphology or solely via the
internal transcribed spacer (ITS) region should be referred to as sensu lato (in the broad sense) since many species
belong to species complexes. Species within a species complex are closely related, and most are cryptic species
particularly species in the C. gloeosporioides and C. acutatum complexes which are commonly associated with
agricultural crops in Malaysia. Due to the importance of Colletotrichum spp. as plant pathogens, up-to-date identification
methods should be used since accurate species identification of Colletotrichum is crucial for formulating suitable disease
management programmes as well as for plant quarantine and biosecurity purposes. This review provides the current
knowledge on the status of Colletotrichum spp. associated with agricultural crops in Malaysia and potential control
methods on different types of agricultural crops.
Colletotrichum--pathogenicity
8.The First Report of Penicillium georgiense in Malaysia.
Mycobiology 2014;42(3):274-278
Penicillium georgiense was isolated from sandy beach soil from Batu Ferringhi beach, Penang Island, Malaysia. The identification was based on morphological characteristics and phylogenetic analysis of internal transcribed spacer regions and beta-tubulin sequences. To the best of our knowledge, this is the first report of P. georgiense in Malaysia.
Malaysia*
;
Penicillium*
;
Soil
;
Tubulin
9.A New Record of Penicillium pimiteouiense from Beach Soil in Malaysia.
Mycobiology 2013;41(4):256-259
Three isolates of Penicillium pimiteouiense were recovered from sandy beach soil samples in Penang Island, Peninsular Malaysia. All the isolates were identified based on morphological characteristics and phylogenetic analysis of internal transcribed spacer regions and beta-tubulin gene. This is a first record of P. pimiteouiense in Malaysia.
Malaysia*
;
Penicillium*
;
Soil*
;
Tubulin
10.Identification and Characterization of Macrophomina phaseolina Causing Leaf Blight on White Spider Lilies (Crinum asiaticum and Hymenocallis littoralis) in Malaysia
Abd Rahim HUDA-SHAKIRAH ; Yee Jia KEE ; Abu Bakar Mohd HAFIFI ; Nurul Nadiah MOHAMAD AZNI ; Latiffah ZAKARIA ; Masratul Hawa MOHD
Mycobiology 2019;47(4):408-414
Crinum asiaticum and Hymenocallis littoralis, commonly known as spider lilies are bulbous perennial and herbaceous plants that widely planted in Malaysia as ornamental. During 2015–2016, symptom of leaf blight was noticed on the hosts from several locations in Penang. The symptom appeared as irregular brown to reddish lesions surrounded by yellow halos. As the disease progressed, the infected leaves became blighted, dried, and fell off with the presence of black microsclerotia and pycnidia on the lesions parts. The present study was conducted to investigate the causal pathogen of leaf blight on C. asiaticum and H. littoralis. Based on morphological characteristics and DNA sequences of internal transcribed spacer (ITS) region and translation elongation factor 1-alpha (TEF1-α) gene, the causal pathogen was identified as Macrophomina phaseolina. Phylogenetic analysis of combined dataset of ITS and TEF1-α grouped the isolates studied with other isolates of M. phaseolina from GenBank. The grouping of the isolates was supported by 96% bootstrap value. Pathogenicity test proved the role of the fungus in causing leaf blight on both hosts.