2.Detection and antibiotic susceptibility pattern of biofilm producing Gram positive and Gram negative bacteria isolated from a tertiary care hospital of Pakistan
Afreenish Hassan ; Javaid Usman ; Fatima Kaleem ; Maria Omair ; Ali Khalid ; Muhammad Iqbal
Malaysian Journal of Microbiology 2011;7(1):57-60
Microorganisms adhere to non-living material or living tissue, and form biofilms made up of extracellular polymers/slime.
Biofilm-associated microorganisms behave differently from free-floating bacteria with respect to growth rates and ability
to resist antimicrobial treatments and therefore pose a public health problem. The objective of this study is to detect the
prevalence of biofilm producers among Gram positive and Gram negative bacteria isolated from clinical specimens, and
to study their antimicrobial susceptibility pattern. The study was carried out from October 2009 to March 2010, at the
Department of Microbiology, Army Medical College/ National University of Sciences and Technology (NUST),
Rawalpindi, Pakistan. Clinical specimens were received from various wards of a tertiary care hospital. These were dealt
by standard microbiological procedures. Gram positive and Gram negative bacteria isolated were subjected to biofilm
detection by congo red agar method (CRA). Antimicrobial susceptibility testing of those isolates, which showed positive
results (slime production), was done according to the Kirby-Bauer disc diffusion technique. A total of 150 isolates were
tested for the production of biofilm/slime. Among them, 81 isolates showed positive results. From these 81, 51 were
Gram positive and 30 were Gram negative. All the 81(54%) slime producers showed reduced susceptibility to majority of
antibiotics. Bacterial biofilms are an important virulence factor associated with chronic nosocomial infection. Detection of
biofilm forming organisms can help in appropriate antibiotic choice.
3.Evaluation of combined disc method for the detection of metallo-β-lactamase producing Gram negative bacilli
Maria Omair ; Javaid Usman ; Fatima Kaleem ; Afreenish Hassan ; Ali Khalid ; Qanita Fahim
Malaysian Journal of Microbiology 2012;8(1):21-25
Aims: Infections due to metallo-β-lactamase (MBL) producing Gram negative rods are a cause of high mortality and morbidity. Early detection by an economical and accurate method may improve patient outcome. This study was aimed to evaluate the diagnostic accuracy of combined disc method for MBL detection by comparing it with MBL-Etest.
Methodology and Results: This cross-sectional, validation study was carried out in the Department of Microbiology, Army Medical College, National University of Sciences and Technology, Rawalpindi, over a period of six months. A total of 52 non-duplicate Gram-negative rods isolated from the routine clinical specimens and found resistant to meropenem/imipenem on Kirby Bauer Disc Diffusion method were subjected to two tests for metallo-β-lactamase detection. One was combined Disc test using imipenem with Ethylene Diamine Tetraacetic Acid (EDTA), where a strain showing an increase in zone of inhibition of combined disc of ≥ 7 mm as compared to imipenem alone, was considered as MBL producer and the other one was MBL-Etest for which results were interpreted as per manufacturer’s guidelines. Combined disc method for MBL detection was found to have a sensitivity, specificity, positive predictive value, negative predictive value and accuracy of 97.5%, 100%, 100%, 92% and 98%.
Conclusion, Significance and Impact of study: Combined disc method is an economical and reliable method for metallo-β-lactamase detection which can be used routinely in any laboratory.
4.Identification of antiplatelet and acetylcholinesterase inhibitory constituents in betel nut.
Ghayur, Muhammad Nabeel ; Kazim, Syed Faraz ; Rasheed, Huma ; Khalid, Asaad ; Jumani, Maliha Iqbal ; Choudhary, Muhammad Iqbal ; Gilani, Anwarul Hassan
Journal of Integrative Medicine 2011;9(6):619-25
Objective: To investigate the possible mechanism and the compound(s) responsible for the antiplatelet and acetylcholinesterase (AChE) inhibitory effects of Areca catechu crude extract (Ac.Cr). Methods: Aqueous-methanol (70%) was used for extraction of plant material (betel nut). Antiplatelet activity was measured in human platelet-rich plasma by using a Lumi-aggregometer while anti-AChE activity was measured spectrophotometrically in vitro. In an attempt to find the responsible compound(s) in betel nut for antiplatelet and anti-AChE activities, different commercially available betel nut compounds were tested. Results: Ac.Cr inhibited platelet aggregation induced by arachidonic acid (AA), adenosine diphosphate (ADP), platelet-activating factor (PAF), epinephrine and Ca(2+)-ionophore. Ac.Cr was the most potent in inhibiting ADP- and Ca(2+)-ionophore-induced aggregation. In the AChE assay, Ac.Cr showed significant AChE inhibitory activity with almost complete inhibition of the enzyme. Out of the tested compounds, none of the compounds in betel nut showed any antiplatelet effect except for catechin that was the most potent against epinephrine-induced aggregation. Catechin was significantly less potent than Ac.Cr, indicating a presence of additional compound(s) with antiplatelet activity. For the AChE inhibitory effect, only tannic acid, gallic acid, diosgenin and isoguvacine were found to be active, whereby tannic acid was more potent than Ac.Cr. Conclusion: This study shows the possible antiplatelet and AChE inhibitory potential of betel nut while further studies are needed to confirm and identify more compounds in betel nut for these actions.
5.Chromatographic finger print analysis of anti-inflammatory active extract fractions of aerial parts of Tribulus terrestris by HPTLC technique
Mohammed Salih Mona ; Alajmi Fahad Mohamed ; Alam Perwez ; Khalid Subki Hassan ; Mahmoud Muddathir Abelkhalig ; Ahmed Jamal Wadah
Asian Pacific Journal of Tropical Biomedicine 2014;(3):203-208
Objective:To develop HPTLC fingerprint profile of anti-inflammatory active extract fractions of Tribulus terrestris (family Zygophyllaceae).
Methods:The anti-inflammatory activity was tested for the methanol and its fractions (chloroform, ethyl acetate, n-butanol and aqueous) and chloroform extract of Tribulus terrestris (aerial parts) by injecting different groups of rats (6 each) with carrageenan in hind paw and measuring the edema volume before and 1, 2 and 3 h after carrageenan injection. Control group received saline i.p. The extracts treatment was injected i.p. in doses of 200 mg/kg 1 h before carrageenan administration. Indomethacin (30 mg/kg) was used as standard. HPTLC studies were carried out using CAMAG HPTLC system equipped with Linomat IV applicator, TLC scanner 3, Reprostar 3, CAMAG ADC 2 and WIN CATS-4 software for the active fractions of chloroform fraction of methanol extract.
Results:The methanol extract showed good antiedematous effect with percentage of inhibition more than 72%, indicating its ability to inhibit the inflammatory mediators. The methanol extract was re-dissolved in 100 mL of distilled water and fractionated with chloroform, ethyl acetate and n-butanol. The four fractions (chloroform, ethyl acetate, n-butanol and aqueous) were subjected to anti-inflammatory activity. Chloroform fraction showed good anti-inflammatory activity at dose of 200 mg/kg. Chloroform fraction was then subjected to normal phase silica gel column chromatography and eluted with petroleum ether-chloroform, chloroform-ethyl acetate mixtures of increasing polarity which produced 15 fractions (F1-F15). Only fractions F1, F2, F4, F5, F7, F9, F11 and F14 were found to be active, hence these were analyzed with HPTLC to develop their finger print profile. These fractions showed different spots with different Rf values.
Conclusions:The different chloroform fractions F1, F2, F4, F5, F7, F9, F11 and F14 revealed 4, 7, 7, 8, 9, 7, 7 and 6 major spots, respectively. The results obtained in this experiment strongly support and validate the traditional uses of this Sudanese medicinal plant.
6.Outcomes of Portosystemic Shunts in Children with and without Liver Transplantation
Hamza Hassan KHAN ; Stuart S. KAUFMAN ; Nada A. YAZIGI ; Khalid M. KHAN
Pediatric Gastroenterology, Hepatology & Nutrition 2024;27(1):37-42
Purpose:
Limited data exist regarding outcome and morbidity associated with portosystemic shunts in the pediatric transplant population. Our study assesses the outcomes of pediatric patients who underwent a portosystemic shunt procedure, both with and without liver transplantation (LT).
Methods:
This study retrospectively reviewed the medical records of pediatric patients aged 0–19 years who underwent shunt placement between 2003 and 2017 at a tertiary care center.The analysis included cases of shunt placement with or without LT.
Results:
A total of 13 pediatric patients were included in the study with median age of 8.8 years. Among the cases, 11 out of 13 (84.6%) underwent splenorenal shunt, 1 (7.7%) underwent a mesocaval shunt, and another 1 (7.7%) underwent a Modified Rex (mesoportal) shunt. Additionally, 5 out of 13 (38.5%) patients had LT, with 4 out of 5 (80.0%) receiving the transplant before shunt placement, and 1 out of 5 (20.0%) receiving it after shunt placement.Gastrointestinal bleeding resulting from portal hypertension was the indication in all cases.A total of 10 complications were reported in 5 patients; the most common complication was anemia in 3 (23.1%) patients. At the most recent follow-up visit, the shunts were functional without encephalopathy, and no deaths were reported.
Conclusion
Shunt placement plays a crucial role in the management of patients with portal hypertension. Our study demonstrates favorable long-term outcomes in pediatric patients who underwent shunt placement. Long term shunt outcomes were similar and unremarkable in patients with LT and without LT.
7.17-alpha hydroxyprogesterone caproate for the prevention of recurrent preterm birth among singleton pregnant women with a prior history of preterm birth: a systematic review and meta-analysis of six randomized controlled trials
Saeed BARADWAN ; Sahar Hassan ABDULGHANI ; Mohammed ABUZAID ; Khalid KHADAWARDI ; Majed Saeed ALSHAHRANI ; Abdulrahman AL-MATARY ; May A. ALRASHEED ; Najlaa Talat MISKI ; Aroob ABDULHALIM ; Yousra Mansour ALTURKI ; Ahmed ABU-ZAID
Obstetrics & Gynecology Science 2021;64(6):484-495
To perform a systematic review and meta-analysis of all randomized controlled trials (RCTs) that investigated the clinical benefits of 17-alpha hydroxyprogesterone caproate (17OHPC) in the prevention of recurrent preterm birth (PTB) among singleton pregnant women with a previous history of PTB. We searched four major databases up till April 2021 and assessed the risk of bias in the included studies. We meta-analyzed various maternal-neonatal endpoints (n=18) and pooled them as mean difference or risk ratio (RR) with 95% confidence interval (CI) using the random-effects model. Six RCTs met the inclusion criteria, comprising 2,573 patients (17OHPC=1,617, control=956). RCTs revealed an overall low risk of bias. The rates of PTB <35 weeks (n=5 RCTs; RR, 0.77; 95% CI, 0.63-0.93; P=0.008), PTB <32 weeks (n=3 RCTs; RR, 0.68; 95% CI, 0.51-0.91; P=0.009), neonates with low birth weight (<2.5 kg) at delivery (n=3 RCTs; RR, 0.63; 95% CI, 0.5-0.79; P<0.001), and neonatal death (n=4 RCTs; RR, 0.41; 95% CI, 0.20-0.84; P=0.02) were significantly reduced in the 17OHPC group compared with the control group. Moreover, 17OHPC treatment correlated with a significantly decreased rate of retinopathy (n=2 RCTs; RR, 0.42; 95% CI, 0.18-0.97; P=0.004). However, there were no significant differences in the rates of neonatal intensive care unit admission, cesarean delivery, and other pretermrelated complications between both the groups. Among singleton pregnant women with a prior history of PTB, 17OHPC may favorably decrease the risks of recurrent PTB and reduce the rate of neonatal death.
8.Abdominoplasty Panniculus as a Source for Human Acellular Dermis: A Preliminary Report
Nayef Abdulrahman. LOURI ; Nigamananda DEY ; Rashed N. ALHASAN ; Safa Hassan ABDULLA ; Mohamed ELSAKKA ; Rasheeqa GULREEZ ; Abdulla Hassan DARWISH ; Balamuthu KADALMANI ; Khalid Bin Ali Al KHALIFA
Tissue Engineering and Regenerative Medicine 2022;19(4):727-738
BACKGROUND:
In extensive deep dermal burn injuries, split-thickness skin graft (STSG) has been the most preferred treatment option for resurfacing burn wounds. A thick split-thickness skin graft is ideal for preventing graft contracture but is associated with delayed donor healing and the lack of adequate donor skin. When applied with STSG, the dermal substitutes offer better-reconstructed skin than STSG alone. Human-derived acellular dermal matrix (HADM) obtained from cadaver skin is a dermal equivalent with good clinical outcomes. However, high cost and limited cadaver donor skin availability limit its clinical utility. Developing a low-cost preparation method and finding an alternate source of human donated skin can help reduce the cost. The objective of this study was to explore the feasibility of making HADM from abdominoplasty panniculus skin.
METHODS:
Skin samples were collected from the abdominoplasty panniculus of ten eligible donors with their informed consent. A combination of low-cost reagents-sodium chloride and hypotonic solution (water for injection) was used for decellularizing the skin. Characterization of the prepared Acellular Dermis Matrix prototype was done.
RESULTS:
The skin was deepidermized with one molar NaCl treatment at 37 °C for 24 h. The deepidermized dermis became acellular with hypotonic solution treatment at 4 °C for two weeks. The hematoxylin and eosin staining and cytotoxicity test confirmed the acellularity and non-cytotoxicity of the prepared HADM prototype. The HADM prototype also facilitated the formation of neo-epithelium in the 3D cell co-culture model.
CONCLUSION
This study confirms that abdominoplasty panniculus can be a viable alternative for HADM preparation. Further characterization studies are required to prove the concept.
9.Chromatographic finger print analysis of anti-inflammatory active extract fractions of aerial parts of Tribulus terrestris by HPTLC technique.
Mona Salih MOHAMMED ; Mohamed Fahad ALAJMI ; Perwez ALAM ; Hassan Subki KHALID ; Abelkhalig Muddathir MAHMOUD ; Wadah Jamal AHMED
Asian Pacific Journal of Tropical Biomedicine 2014;4(3):203-208
OBJECTIVETo develop HPTLC fingerprint profile of anti-inflammatory active extract fractions of Tribulus terrestris (family Zygophyllaceae).
METHODSThe anti-inflammatory activity was tested for the methanol and its fractions (chloroform, ethyl acetate, n-butanol and aqueous) and chloroform extract of Tribulus terrestris (aerial parts) by injecting different groups of rats (6 each) with carrageenan in hind paw and measuring the edema volume before and 1, 2 and 3 h after carrageenan injection. Control group received saline i.p. The extracts treatment was injected i.p. in doses of 200 mg/kg 1 h before carrageenan administration. Indomethacin (30 mg/kg) was used as standard. HPTLC studies were carried out using CAMAG HPTLC system equipped with Linomat IV applicator, TLC scanner 3, Reprostar 3, CAMAG ADC 2 and WIN CATS-4 software for the active fractions of chloroform fraction of methanol extract.
RESULTSThe methanol extract showed good antiedematous effect with percentage of inhibition more than 72%, indicating its ability to inhibit the inflammatory mediators. The methanol extract was re-dissolved in 100 mL of distilled water and fractionated with chloroform, ethyl acetate and n-butanol. The four fractions (chloroform, ethyl acetate, n-butanol and aqueous) were subjected to anti-inflammatory activity. Chloroform fraction showed good anti-inflammatory activity at dose of 200 mg/kg. Chloroform fraction was then subjected to normal phase silica gel column chromatography and eluted with petroleum ether-chloroform, chloroform-ethyl acetate mixtures of increasing polarity which produced 15 fractions (F1-F15). Only fractions F1, F2, F4, F5, F7, F9, F11 and F14 were found to be active, hence these were analyzed with HPTLC to develop their finger print profile. These fractions showed different spots with different Rf values.
CONCLUSIONSThe different chloroform fractions F1, F2, F4, F5, F7, F9, F11 and F14 revealed 4, 7, 7, 8, 9, 7, 7 and 6 major spots, respectively. The results obtained in this experiment strongly support and validate the traditional uses of this Sudanese medicinal plant.
10.Synthesis, characterization, anti-mycobacterial activity and in silico study of new 2,5-disubstituted-1,3,4-oxadiazole derivatives
Azmi, M.N. ; Hasmaruddin, N.S. ; Mat Ali, N.A. ; Osman, H. ; Mohamad, S. ; Parumasivam, T. ; Hassan, M.Z. ; Abd Ghani, M.S. ; Awang, K.
Tropical Biomedicine 2022;39(No.3):467-475
A series of new 2,5-disubstituted-1,3,4-oxadiazole derivatives (5a-j and 6a-j) have been designed and
synthesized in four-steps. Sixteen compounds among the twenty compounds are reported for the first
time. The compounds were characterized and confirmed by the FTIR, 1D- and 2D-NMR and HRMS
analyses, and were tested against Mycobacterium smegmatis and Mycobacterium tuberculosis H37Ra.
Compound 5d was the most active against M. smegmatis with MIC value of 25 µM, and exhibited
cidal activity with MBC of 68 µM, respectively. The time-kill assay showed the good killing rate at 77%
with the combination of isoniazid (INH). In addition, checkboard assay confirmed the interaction of
compound 5d was categorised as additive. Docking simulation has been performed to position 5d into
the pantothenate synthetase active site with binding free energy value –8.6 kcal mol-1. It also occupied
the same active site as that of standard native ligand with similar interactions, which clearly indicate
their potential as pantothenate synthetase inhibitor.