2.Low efficacy of delthamethrin-treated net against Singapore Aedes aegypti is associated with kdr-type resistance
Pang, S.C ; Chiang, L.P ; Tan, C.H ; Vythilingam, I ; Lam-Phua, S.G ; Ng, L.C.
Tropical Biomedicine 2015;32(1):140-150
There has been a worldwide surge in the number and severity of dengue in the past
decades. In Singapore, relentless vector control efforts have been put in to control the
disease since the 1960’s. Space spraying, fogging, chemical treatment and source reduction
are some commonly used methodologies for controlling its vectors, particularly Aedes aegypti.
Here, as we explored the use of a commercially available delthamethrin-treated net as an
alternative strategy and the efficacy of the treated net was found to be limited. Through
bioassays and molecular studies, the failure of the treated net to render high mortality rate
was found to be associated with the knockdown resistance (kdr) mutation. This is the first
report of kdr- mutations in Singapore’s Ae. aegypti. At least one point mutation, either
homozygous or heterozygous, at amino acid residue V1016G of DIIS6 or F1269C of DIIIS6
was detected in 93% of field strains of Ae. aegypti. Various permutations of wild type and
mutant amino acids of the four alleles were found to result in varying degree of survival rate
among local field Ae. aegypti when exposed to the deltamethrin treated net. Together with
the association of higher survival rate with the presence of both V1016G and F1269C, the
data suggest the role of these mutations in the resistance to the deltamethrin. The high
prevalence of these mutations were confirmed in a country wide survey where 70% and 72%
of the 201 Ae. aegypti analysed possessed the mutations at residues 1016 and 1269 respectively.
The highest mutated frequency combination was found to be heterozygous alleles (VG/FC) at
both residues 1016 and 1269 (37.8%), followed by homozygous mutation at allele 1269 (24.4%)
and homozygous mutation at allele 1016 (22.9%). The kdr- type of resistance among the
vector is likely to undermine the effectiveness of pyrethroids treated materials against these
mosquitoes.
3.Zika virus and its potential re-emergence in Malaysia
Jamal I-Ching Sam ; Yoke Fun Chan ; Indra Vythilingam ; Wan Yusoff Wan Sulaiman
The Medical Journal of Malaysia 2016;71(2):66-68
Zika virus (ZIKV) has re-emerged to cause explosive
epidemics in the Pacific and Latin America, and appears to
be associated with severe neurological complications
including microcephaly in babies. ZIKV is transmitted to
humans by Aedes mosquitoes, principally Ae. aegypti, and
there is historical evidence of ZIKV circulation in Southeast
Asia. It is therefore clear that Malaysia is at risk of similar
outbreaks. Local and international guidelines are available
for surveillance, diagnostics, and management of exposed
and infected individuals. ZIKV is the latest arbovirus to have
spread globally beyond its initial restricted niche, and is
unlikely to be the last. Innovative new methods for
surveillance and control of vectors are needed to target
mosquito-borne diseases as a whole.
Zika Virus
4.Prevalence of intestinal protozoa in an aborigine community in Pahang, Malaysia.
M Y Noor Azian ; Y M San ; C C Gan ; M Y Yusri ; Y Nurulsyamzawaty ; A H Zuhaizam ; M N Maslawaty ; I Norparina ; I Vythilingam
Tropical biomedicine 2007;24(1):55-62
The objective was to estimate the prevalence of intestinal protozoa among the aborigines and to determine the problems regarding the infection. The study was carried out in January 2006 in Pos Senderut, Pahang, Malaysia. Samples of faeces were collected from children and adults and these were fixed in PVA and trichrome staining was carried out. From the 130 individuals studied, 94 (72.3%) were positive with at least one intestinal protozoa. Nine intestinal protozoa namely Blastocystis hominis, Giardia lamblia, Entamoeba histolytica, Entamoeba coli, Endolimax nana, Entamoeba hartmani, Entamoeba polecki, Iodamoeba butschlii and Chilomastix mesnili were detected. The prevalent species were B. hominis (52.3%), followed by G. lamblia (29.2%), E. coli (26.2%) and E. histolytica (18.5%). The other species ranged from 1.5 to 10.8%. Among the positive samples, mixed infection with E. histolytica and G. lamblia was 3.8%, E. histolytica and B. hominis was 15.4%, G. lamblia and B. hominis was 17.7%. Triple infection of E. histolytica, G. lamblia and B. hominis was 3.1%. The infection was more prevalent in children below 10 years age group (45.4%) and lowest in the age above 60 years (3.8%). The high prevalence was attributable to poor environmental management, poor personal hygiene and lack of health education.
Protozoal
;
upper case gee
;
Upper case ee
;
Upper case Bee
;
Infection as complication of medical care
5.Investigation of possible rickettsial infection in patients with malaria
Tay, S.T. ; Kho, K.L. ; Vythilingam, I. ; Ooi, C.H. ; Lau, Y.L.
Tropical Biomedicine 2019;36(1):257-262
Rickettsioses are a common health problem in many geographical areas, including
rural areas in Southeast Asia. Co-infection of rickettsioses and malaria has been reported in
Africa, where common reservoir and vectors are available. In this study, blood samples of
Malaysian patients microscopically positive (n=148) and negative (n=88) for malaria parasites
(Plasmodium knowlesi, Plasmodium malariae, Plasmodium falciparum, and Plasmodium
vivax) were screened for the presence of rickettsial DNA, using PCR assays targeting specific
genes. A partial fragment of rickettsial ompB gene was successfully amplified and sequenced
from a patient microscopically positive for Plasmodium spp. and PCR-positive for P. vivax.
BLAST analysis of the ompB sequence demonstrated the highest sequence similarity (99.7%
similarity, 408/409nt) with Rickettsia sp. RF2125 (Genbank accession no. JX183538) and
91.4% (374/409 nt) similarity with Rickettsia felis URRWXCal2 (Genbank accession no.
CP000053). This study reports rickettsial infection in a malaria patient for the first time in the
Southeast Asia region.
6.Histopathology of Brugia pahangi and Plasmodium berghei ANKA co-infection in the Gerbil (Meriones unguiculatus)
Junaid, O.Q ; Wong, K.T ; Khaw, L.T. ; Mahmud, R. ; Vythilingam, I.
Tropical Biomedicine 2018;35(4):981-998
Co-infection with multiple different parasites is a common phenomenon in both
human and animals. Among parasites that frequently co-infect the same hosts, are the
filarial worms and malaria parasites. Despite this, the mechanisms underlying the
interactions between these parasites is still relatively unexplored with very few studies
available on the resulting pathologies due to co-infection by filarial nematodes and malaria
parasites. Hence, this study investigated the histopathological effect of Brugia pahangi
and Plasmodium berghei ANKA (PbA) infections in gerbil host. Gerbils grouped into B.
pahangi-infected, PbA-infected, B. pahangi and PbA-coinfected, and uninfected control,
were necropsied at different time points of post PbA infections. Brugia pahangi infections
in the gerbils were first initiated by subcutaneous inoculation of 50 infective larvae, while
PbA infections were done by intraperitoneal injection of 106 parasitized red blood cells
after 70 days patent period of B. pahangi. Organs such as the lungs, kidneys, spleen, heart
and liver were harvested aseptically at the point of necropsy. There was significant
hepatosplenomegaly observed in both PbA-infected only and coinfected gerbils. The spleen,
liver and lungs were heavily pigmented. Both B. pahangi and PbA infections (mono and coinfections)
resulted in pulmonary edema, while glomerulonephritis was associated with
PbA infections. The presence of both parasites induced extramedullary hematopoiesis in
the spleen and liver. These findings suggest that the pathologies associated with coinfected
gerbils were synergistically induced by both B. pahangi and PbA infections.
7.Genetic diversity of Merozoite Surface Protein-1 gene block 2 allelic types in Plasmodium falciparum isolates from Malaysia and Thailand
Goh, X.T. ; Chua, K.H. ; Vythilingam, I. ; Lee, P.C. ; Tan, T.C. ; Yap, N.J. ; Chai, H.C. ; Nissapatorn, V. ; Lim, Y.A.L
Tropical Biomedicine 2019;36(1):70-80
Malaria is the most common vector-borne parasitic disease in Malaysia and Thailand,
especially in Malayan Borneo and along the Thailand border areas, but little is known about
the genetic diversity of the parasite. Present study aims to investigate the genetic diversity
of Plasmodium falciparum isolates in these two countries and eventually contributes to
more effective malaria control strategies, particularly in vaccine and antimalarial treatment.
One hundred and seventy three P. falciparum isolates were collected from Malaysia (n = 67)
and Thailand (n = 106) and genotyped using nested PCR targeting the polymorphic region of
MSP-1, block 2. Sequence analysis was conducted to investigate the allele diversity of the
isolates. Three allelic families were identified in Malaysian and Thailand P. falciparum
isolates, MAD20, K1 and RO33. Sequence analysis revealed that there were 5 different
MAD20, 1 K1 and 2 different RO33 for Malaysian isolates. Thailand isolates exhibited greater
polymorphism because there were 13 different MAD20, 6 different K1 and 2 different RO33
identified in this study. Multiclonal infections were observed for the isolates in both countries,
however, low multiplicity of infection (MOI) was observed for Malaysian (1.1) and Thailand
(1.2) isolates. Phylogenetic analysis showed that P. falciparum isolates of Malaysia and
Thailand were clustered in the same group for all the allelic families. Population structure of
P. falciparum isolates in Malaysia and Thailand exhibit extensive genetic polymorphism but
showed high similarities as well as comparable MOI.
8.An automated malaria cells detection from thin blood smear images using deep learning
Sukumarran, D. ; Hasikin, K. ; Mohd Khairuddin, A.S. ; Ngui, R. ; Wan Sulaiman, W.Y. ; Vythilingam, I. ; Divis, P.C.S.
Tropical Biomedicine 2023;40(No.2):208-219
Timely and rapid diagnosis is crucial for faster and proper malaria treatment planning. Microscopic
examination is the gold standard for malaria diagnosis, where hundreds of millions of blood films
are examined annually. However, this method’s effectiveness depends on the trained microscopist’s
skills. With the increasing interest in applying deep learning in malaria diagnosis, this study aims to
determine the most suitable deep-learning object detection architecture and their applicability to detect
and distinguish red blood cells as either malaria-infected or non-infected cells. The object detectors
Yolov4, Faster R-CNN, and SSD 300 are trained with images infected by all five malaria parasites and
from four stages of infection with 80/20 train and test data partition. The performance of object
detectors is evaluated, and hyperparameters are optimized to select the best-performing model. The
best-performing model was also assessed with an independent dataset to verify the models’ ability
to generalize in different domains. The results show that upon training, the Yolov4 model achieves a
precision of 83%, recall of 95%, F1-score of 89%, and mean average precision of 93.87% at a threshold
of 0.5. Conclusively, Yolov4 can act as an alternative in detecting the infected cells from whole thin
blood smear images. Object detectors can complement a deep learning classification model in detecting
infected cells since they eliminate the need to train on single-cell images and have been demonstrated
to be more feasible for a different target domain.