1.Potato Virus Y mRNA Expression Knockdown Mediated by siRNAs in Cultured Mammalian Cell Line
Tabassum Bushra ; Nasir Ahmad Idrees ; Husnain Tayyab
Virologica Sinica 2011;26(2):105-113
RNA interference(RNAi)is a powerful tool for functional gene analysis which has been successfully used to downregulate the expression levels of target genes.The goal of this research was to provide a highly robust and concise methodology for in-vitro screening of efficient siRNAs from a bulk to be used as a tool to protect potato plants against PVY invasion.In our study,a 480bp fragment of the eapsid protein gene of potato virus Y(CP-PVY)was used as a target to downregulate PVY mRNA expression in-vitro,as the CP gene interferes with viral uncoating,translation and replication.A total of six siRNAs were designed and screened through transient transfection assay and knockdown in expression of CP-PVY mRNA was calculated in CHO-k cells.CP-PVY mRNA knockdown efficiency was analyzed by RT-PCR and real-time PCR of CHO-k cells co-transfected with a CP gene construct and siRNAs.Six biological replicates were performed in this study.In our findings,one CP gene specific siRNA out of a total of six was found to be the most effective for knockdown of CP-PVY mRNA in transfected CHO-k cells by up to 80%-90%.
2.Somatic embryogenesis in wild relatives of cotton (Gossypium Spp.).
Abdul Qayyum RAO ; S Sarfraz HUSSAIN ; M Saqib SHAHZAD ; S Yassir Abbas BOKHARI ; M Hashim RAZA ; Allah RAKHA ; A MAJEED ; A Ali SHAHID ; Zafar SALEEM ; Tayyab HUSNAIN ; S RIAZUDDIN
Journal of Zhejiang University. Science. B 2006;7(4):291-298
Wild cotton species can contribute a valuable gene pool for agronomically desirable cultivated tetraploid cultivars. In order to exploit diploid cotton a regeneration system is required to achieve transformation based goals. The present studies aimed at optimizing the conditions for regeneration of local varieties as well as wild species of cotton. Different callus induction media were tested with varying concentrations of hormones in which sucrose was used as nutritional source. Different explants (hypocotyls, cotyledon, root) were used to check the regeneration of both local cotton plants and wild relatives using T & G medium, BAP medium, CIM medium, EMMS medium, and cell suspension medium. Different stages of embryogenicity such as early torpedo stage, late torpedo stage, heart stage, globular stage and cotyledonary stage were observed in wild relatives of cotton. The results of this study pave the way for establishing future transformation methods.
2,4-Dichlorophenoxyacetic Acid
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Benzyl Compounds
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Cotyledon
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growth & development
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Culture Media
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Gossypium
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embryology
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genetics
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growth & development
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metabolism
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Hypocotyl
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growth & development
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Kinetin
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Naphthaleneacetic Acids
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Plant Growth Regulators
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Purines
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Regeneration
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physiology
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Transformation, Genetic
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Zeatin