1.Characterization of vancomycin-resistant Enterococcus isolates from broilers in Selangor, Malaysia.
Getachew YM ; Hassan L ; Zakaria Z ; Saleha AA ; Kamaruddin MI ; Che Zalina MZ
Tropical Biomedicine 2009;26(3):280-288
Vancomycin-resistant Enterococcus (VRE) is an emerging nosocomial pathogen in humans. The use of antibiotics in human therapy and in the production of food animals has been incriminated in the emergence of this organism. The present study describes the distribution of VRE species, the vancomycin-resistant genes detected, the vancomycin resistance pattern observed, and the genetic diversity of the isolates found in live broiler chickens in Malaysia. Overall 140 VRE were isolated with species comprising Enterococcus faecalis (48%), Enterococcus faecium (25.7%), Enterococcus gallinarum (12.1%), Enterococcus casseliflavus (1.4%) and other Enterococcus species (12.8%). Vancomycin resistance gene vanA and intrinsic genes vanC1 and vanC2/3 were detected in the study population. VanA was detected in 15 (63.9%) of E. faecium, 23 (22.4%) of E. faecalis and in 3 (17.6%) E. gallinarum isolates. E-test was conducted on randomly selected 41 of the isolates and the minimum inhibition concentration (MIC) of vancomycin for five (11.9%) of tested isolates is more than 256mug/ml. Genotypic analysis using random amplified polymorphic DNA (RAPD) showed genetic diversity within the Enterococcus species.
2.Breeding patterns of the JE vector Culex gelidus and its insect predators in rice cultivation areas of northern peninsular Malaysia.
Abu Hassan, A ; Hamady, D ; Tomomitsu, S ; Michael, B ; Jameel S L, A S
Tropical Biomedicine 2010;27(3):404-16
Japanese encephalitis (JE) virus activity is an important cause of viral encephalitis in Southeast Asia. In Malaysia, JEV activity has been first detected in Culex gelidus in 1976. Since then, no study has fully addressed the seasonal dynamics of this mosquito. As irrigated rice production expands, the incidence of JEV vectors, particularly Cx. gelidus is expected to increase. We surveyed Penang Island to determine the breeding patterns of Cx. gelidus and their potential insect predators, in relation to habitat/niche and rice growing period. Six rice fields proper (RFP) and related drainage canals (DC) were visited through three cultivation cycles (CCs) over 17 months. Weekly visits were performed to each of the 36 sites and mosquito larvae and aquatic insects were sampled from RFP and DCs using dippers. Culex gelidus was abundant in RFP and almost absent in DCs. Its densities usually were high during the first and 3rd CC and when the RFs were in Fp, Pp and Gp. In DCs, the mosquito was abundant during Mp, e.g., 2nd CC. Predators, especially those belonging to the families Corixidae, Coenagrionidae and Dytiscidae, were more present in RFP. Predator numbers usually were high during the first CC; in some cases predator abundance peaked during other CCs, e.g., corixids and dysticids. In RFP, neither corixids nor coenagrionids showed any positive correlation with densities of Cx. gelidus. However, dytiscids' population peaked when the mosquito densities were on the rise. These observations suggest that Cx. gelidus is active during the period of rice cultivation. Operational vector control through bio-control or with insecticides near the end of the rice cultivation season in RFP may prove beneficial in reducing the density of Cx. gelidus, but also the amount of bio-agent or insecticide applied on riceland.
3.Isolation and molecular characterization of Brucella melitensis from seropositive goats in Peninsula Malaysia
Bamaiyi, P.H. ; Hassan, L. ; Khairani-Bejo, S. ; Zainal Abidin, M. ; Ramlan, M. ; Krishnan, N. ; Adzhar, A. ; Abdullah, N. ; Hamidah, N.H.M. ; Norsuhanna, M.M. ; Hashim, S.N.
Tropical Biomedicine 2012;29(4):513-518
A study was carried out to isolate Brucella melitensis using established
bacteriological and PCR techniques in Brucella seropositive goats in farms in Selangor, Negeri
Sembilan, Melaka and Pulau Pinang. Brucella melitensis was isolated from 7 of 134 reactors
with the highest isolation from the vaginal swabs (57.14%) followed by the spleen (28.57%),
uterine fluid (14.29%). No Brucella was isolated from the lymph nodes. PCR confirmed all the
seven isolates as B. melitensis and isolates were phylogenetically related to other isolates
from India, Iran, and Israel but most closely related to isolates from Singapore.
4.The Effect of Bracing on Spinopelvic Rotation and Psychosocial Parameters in Adolescents with Idiopathic Scoliosis
Yalda KHOSHHAL ; Maryam JALALI ; Taher BABAEE ; Hassan GHANDHARI ; Jeffrey L GUM
Asian Spine Journal 2019;13(6):1028-1035
STUDY DESIGN: Retrospective study.PURPOSE: To evaluate the effect of bracing on spinopelvic rotation and psychosocial parameters in adolescents with idiopathic scoliosis (AIS).OVERVIEW OF LITERATURE: Complex three-dimensional deformity in AIS is proposed to influence the spinopelvic parameters and psychosocial condition in adolescents; however, few studies have quantitatively evaluated these parameters.METHODS: Thirty AIS who were prescribed a brace were included in the study. The patients’ standing postero-anterior and total spine radiographs were used to measure the primary curve Cobb angle, vertebral rotation, and pelvic rotation. Apical vertebral rotation (AVR), upper AVR, and lower AVR were measured using the Nash-Moe method. Pelvic rotation was determined using the left-to-right hemipelvic width ratio. The curve pattern was classified as per the Lenke classification system. In all, 14 patients had a type I curve, five had type II, six had type III, one had type IV, and four had type V curves. Brace compliance was subjectively evaluated by interviewing the patients and their parents. The health-related quality of life (HRQOL) and stress level of the recruited patients were assessed using the Brace Questionnaire and Bad Sobernheim Stress Questionnaire, respectively.RESULTS: The Cobb angle significantly decreased with at least 6 months of brace use. AVR correction changed significantly; however, no such results were observed for upper and lower AVR. Pelvic rotation and psychosocial parameters were not significantly affected by brace use. No statistically significant correlation was observed between brace compliance and curve correction.CONCLUSIONS: The Cobb angle and AVR are crucial measurements that help evaluate the treatment efficacy in AIS with small curves who undergo brace treatment. HRQOL and pelvic axial rotation are not influenced by the brace treatment.
Adolescent
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Braces
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Classification
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Compliance
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Congenital Abnormalities
;
Humans
;
Methods
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Parents
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Pelvis
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Quality of Life
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Retrospective Studies
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Scoliosis
;
Spine
;
Treatment Outcome
5.Extracorporeal photopheresis for chronic graft-versus-host disease: a systematic review and meta-analysis.
Mohsin Ilyas MALIK ; Mark LITZOW ; William HOGAN ; Mrinal PATNAIK ; Mohammad Hassan MURAD ; Larry J PROKOP ; Jeffrey L WINTERS ; Shahrukh HASHMI
Blood Research 2014;49(2):100-106
BACKGROUND: The safety of extracorporeal photopheresis (ECP) in steroid-refractory chronic graft-versus-host disease (SR-cGVHD) has been explored in multiple studies but reported response rates (RR) vary significantly across studies. METHODS: We conducted a meta-analysis to assess the efficacy of ECP for SR-cGVHD. A search of electronic databases for studies published between 1984 and 2012 was conducted. End points included RR: complete response (CR), overall response rates (ORR), and organ-specific RR. The initial search generated 312 studies, of which 18 met the selection criteria (N=595). A random effects model was used for pooled rates. RESULTS: Pooled CR rates and ORR were 29% (confidence interval [CI], 19-42%) and 64% (CI, 65-82%), respectively. One-year overall survival was available for 4 studies only and was 49% (CI, 29-70%). The pooled RR for skin, liver, ocular, oral, lung, gastrointestinal and musculoskeletal SR-cGVHD was 74%, 68%, 60%, 72%, 48%, 53%, and 64%, respectively. There was a significant heterogeneity among studies due to differences in ECP schedules and duration. No significant differences in responses to ECP for pediatric and adult populations were found. Sensitivity analysis could not be undertaken due to a limited number of prospective studies. CONCLUSION: ECP is an effective therapy for oral, skin, and liver SR-cGVHD, with modest activity in lung and gastrointestinal SR-cGVHD.
Adult
;
Appointments and Schedules
;
Graft vs Host Disease*
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Humans
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Liver
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Lung
;
Patient Selection
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Photopheresis*
;
Population Characteristics
;
Skin
6.A simple technique for morphological measurement of cerebral arterial circle variations using public domain software (Osiris).
Saeed ANSARI ; Majid DADMEHR ; Behzad EFTEKHAR ; Douglas J MCCONNELL ; Sarah GANJI ; Hassan AZARI ; Shahab KAMALI-ARDAKANI ; Brian L HOH ; J MOCCO
Anatomy & Cell Biology 2011;44(4):324-330
This article describes a straightforward method to measure the dimensions and identify morphological variations in the cerebral arterial circle using the general-purpose software program Osiris. This user-friendly and portable program displays, manipulates, and analyzes medical digital images, and it has the capability to determine morphometric properties of selected blood vessels (or other anatomical structures) in humans and animals. To ascertain morphometric variations in the cerebral arterial circle, 132 brains of recently deceased fetuses, infants, and adults were dissected. The dissection procedure was first digitized, and then the dimensions were measured with Osiris software. Measurements of each vessel's length and external diameters were used to identify and classify morphological variations in the cerebral arterial circle. The most commonly observed anatomical variations were uni- and bilateral hypoplasia of the posterior communicating artery. This study demonstrates that public domain software can be used to measure and classify cerebral arterial circle vessels. This method could be extended to examine other anatomical regions or to study other animals. Additionally, knowledge of variations within the circle could be applied clinically to enhance diagnostic and treatment specificity.
Adult
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Animals
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Arteries
;
Blood Vessels
;
Brain
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Circle of Willis
;
Fetus
;
Humans
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Infant
;
Public Sector
;
Sensitivity and Specificity
7.Characteristic Changes in Decidual Gene Expression Signature in Spontaneous Term Parturition.
Haidy EL-AZZAMY ; Andrea BALOGH ; Roberto ROMERO ; Yi XU ; Christopher LAJEUNESSE ; Olesya PLAZYO ; Zhonghui XU ; Theodore G PRICE ; Zhong DONG ; Adi L TARCA ; Zoltan PAPP ; Sonia S HASSAN ; Tinnakorn CHAIWORAPONGSA ; Chong Jai KIM ; Nardhy GOMEZ-LOPEZ ; Nandor Gabor THAN
Journal of Pathology and Translational Medicine 2017;51(3):264-283
BACKGROUND: The decidua has been implicated in the “terminal pathway” of human term parturition, which is characterized by the activation of pro-inflammatory pathways in gestational tissues. However, the transcriptomic changes in the decidua leading to terminal pathway activation have not been systematically explored. This study aimed to compare the decidual expression of developmental signaling and inflammation-related genes before and after spontaneous term labor in order to reveal their involvement in this process. METHODS: Chorioamniotic membranes were obtained from normal pregnant women who delivered at term with spontaneous labor (TIL, n = 14) or without labor (TNL, n = 15). Decidual cells were isolated from snap-frozen chorioamniotic membranes with laser microdissection. The expression of 46 genes involved in decidual development, sex steroid and prostaglandin signaling, as well as pro- and anti-inflammatory pathways, was analyzed using high-throughput quantitative real-time polymerase chain reaction (qRT-PCR). Chorioamniotic membrane sections were immunostained and then semi-quantified for five proteins, and immunoassays for three chemokines were performed on maternal plasma samples. RESULTS: The genes with the highest expression in the decidua at term gestation included insulin-like growth factor-binding protein 1 (IGFBP1), galectin-1 (LGALS1), and progestogen-associated endometrial protein (PAEP); the expression of estrogen receptor 1 (ESR1), homeobox A11 (HOXA11), interleukin 1β (IL1B), IL8, progesterone receptor membrane component 2 (PGRMC2), and prostaglandin E synthase (PTGES) was higher in TIL than in TNL cases; the expression of chemokine C-C motif ligand 2 (CCL2), CCL5, LGALS1, LGALS3, and PAEP was lower in TIL than in TNL cases; immunostaining confirmed qRT-PCR data for IL-8, CCL2, galectin-1, galectin-3, and PAEP; and no correlations between the decidual gene expression and the maternal plasma protein concentrations of CCL2, CCL5, and IL-8 were found. CONCLUSIONS: Our data suggests that with the initiation of parturition, the decidual expression of anti-inflammatory mediators decreases, while the expression of pro-inflammatory mediators and steroid receptors increases. This shift may affect downstream signaling pathways that can lead to parturition.
Chemokines
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Cytokines
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Decidua
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Estrogen Receptor alpha
;
Estrogens
;
Female
;
Galectin 1
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Galectin 3
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Galectins
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Gene Expression*
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Genes, Homeobox
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Humans
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Immunoassay
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Interleukin-8
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Interleukins
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Leukocytes
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Membranes
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Microdissection
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Parturition*
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Plasma
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Pregnancy
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Pregnant Women
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Progesterone
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Real-Time Polymerase Chain Reaction
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Receptors, Progesterone
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Receptors, Steroid
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Sexual Development
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Transcriptome*
8.Molecular detection of Leptospira sp. in cattle and goats in Kelantan, Malaysia after a massive flood using multiplex polymerase chain reaction
Sabri, A.R. ; Khairani-Bejo, S. ; Zunita, Z. ; Hassan, L.
Tropical Biomedicine 2019;36(1):165-171
Flood is a potential driver in spreading waterborne diseases including leptospirosis,
which is a zoonotic disease caused by pathogenic bacteria of the genus Leptospira. In the
case of leptospirosis, cattle and goats can be incidental hosts and potential carriers of
leptospirosis. Traditionally, serology such as microscopic agglutination test (MAT) and isolation
of the organisms have been commonly used as the diagnostic approaches in diagnosing
leptospirosis. However, nowadays, various molecular techniques have been developed for
specific detection of Leptospira sp. such as, polymerase chain reaction (PCR), which is
sensitive, specific and rapid in detecting the species. This study detected Leptospira sp.
directly from the blood and urine of the animals such as, cattle, goats and sheep in Kelantan
after a massive flood by using multiplex PCR (mPCR). From the results collected in the study,
four blood samples (0.63%; 4/635) were found to be positive with Leptospira sp. and one urine
sample (3.23%; 1/31) was detected as positive with Leptospira sp. The blood and urine
samples that were detected to be positive with Leptospira sp. were collected from cattle and
goats exposed to the flood. However, no Leptospira sp. was detected from the sheep in this
study. Multiplex PCR (mPCR) was successfully used to detect the presence of Leptospira sp.
in animals. Apart from that, it is also suggested that flood has a significant role in transmitting
the disease to animals.
9.Toxoplasma gondii infection in native village chickens (Gallus domesticus) in Selangor and Melaka, Malaysia
Sabri, A.R. ; Hassan, L. ; Sharma, R.S.K. ; Noordin, M.M.
Tropical Biomedicine 2019;36(3):604-609
Toxoplasmosis is a worldwide zoonosis caused by the protozoa Toxoplasma gondii
which affects human and animals. Village chickens (Gallus domesticus) most commonly
known as Ayam Kampung or free-range chickens, have been suggested to play a role in the
epidemiology of toxoplasmosis. This study determines the presence of T. gondii in the village
chicken populations in two states of Malaysia. A total of 50 serum samples from the chickens
from Selangor (n=20) and Melaka (n=30) were collected and analysed using commercial
serological kits. T. gondii antigen was detected in 20% (Selangor 30%; Melaka 13%) samples
using ELISA test and anti-T. gondii antibody was detected in all positive ELISA samples using
the indirect haemagglutination test (IHAT). Histopathological examination revealed tissue
changes such as inflammation and degeneration in brain and liver of seropositive chickens.
This is the first report of T. gondii infection in the village chickens in Malaysia.
10.First molecular detection of porcine circovirus type 4 (PCV4) in Malaysia
Tan, C.Y. ; Thanawongnuwech, R. ; Arshad, S.S. ; Hassan, L. ; Lee, C.Y. ; Low, S.E. ; Fong, W.C.M. ; Ooi, P.T.
Tropical Biomedicine 2023;40(No.3):301-306
Porcine circovirus type 4 (PCV4) is the newest member in the porcine circovirus family, first reported in
2020. To date, the presence of PCV4 has only been reported in China, South Korea and most recently
in Thailand. Detection of PCV4 have been reported in various production stages of pigs from piglets,
finishers to sows; associated with a myriad of clinical manifestations including porcine dermatitis and
nephropathy syndrome (PDNS), postweaning multisystemic wasting syndrome (PMWS), respiratory,
enteric and neurological diseases. While successful virus isolation and culture has yet to be reported,
pathogenicity of PCV4 has been demonstrated through infectious clone studies. The objective of this
study is to investigate the presence of PCV4 in Malaysian porcine population to update the epidemiology
of porcine circoviruses in Malaysia. A total of 49 samples from commercial intensive pig farms,
abattoir and wild boar population were subjected to conventional polymerase chain reaction assay to
detect PCV4 capsid (cap) genome. Resulting cap nucleotide sequences were analyzed for maximum
likelihood phylogeny relationship. Results revealed that PCV4 is present in Peninsular Malaysia at a
molecular prevalence of 4.08% (2 / 49 samples). Both PCV4 positive samples originated from clinically
healthy finishers. Malaysian PCV4 strains were classified as genotype PCV4b, and were found to be
phylogenetically distinct from the China, South Korea and Thailand strains. With this latest update of
the novel PCV4 in Malaysia, it is clear that more attention needs to be given to the investigation of
novel porcine circoviruses (PCV) and management of PCV diseases.