1.Escherichia fergusonii identified in preputial swabs from healthy Aceh cattle by phylogenetic 16S rRNA analysis
Ummu BALQIS ; Muhammad HAMBAL ; Masda ADMI ; Nellita MEUTIA ; Mohd. Agus Nashri Abdullah ; T. Reza FerasyiTriva Murtina Lubis ; Mahdi ABRAR
Malaysian Journal of Microbiology 2018;14(3):229-235
Aims:Thisstudy aimed to assess the risk of reproductive tract contamination in Aceh cattle by Escherichia fergusoniias revealed by 16S rRNA gene sequencing of preputial swab samples.Methodology and results:Preputial swabs taken from 50 breeding bulls at the Indrapuri Breeding and Forage Center of Aceh Cattle, Banda Aceh, Indonesia, were examined for the presence of bacteria. Samples were streaked on MacConkey agar and incubated under aerobic conditions at 37°C for 24 h. Smooth,yellow-or rose-colored colonies were selected for their characteristic appearance andsubjected to further analysis. Genetic identification was based on 16S rRNA gene sequencing and PCR analysis. We conducted a 16S rRNA sequence similarity search with GenBank using BLAST and constructed neighbour-joining dendrogramsusing MEGA. From among closely related species of the genus Enterobacteriaceae, we identified the enteric bacterium E. fergusoniias having the highest sequence similarity.Conclusion, significance and impact of study:We concluded that the E. fergusoniibacterium positively presence in preputial swab samples of clinically healthyAceh cattle population. Accordingly, it is potentially allowing the bacterium to be spread during natural mating or semen collection processing for artificial insemination in cattle breeding farm
2.Can Costus afer be used for co-treatment of COVID-19, its symptoms and comorbidities? A novel approach for combating the pandemic and implications for sub-Saharan Africa
Jannat, K. ; Hasan, A. ; Bondhon, T.A. ; Mahboob, T. ; Paul, A.K. ; Jahan, R. ; Nissapatorn, V. ; Pereira, M.L. ; Wiart, C. ; Rahmatullah, M.
Tropical Biomedicine 2021;38(No.4):540-551
Despite the huge loss of lives and massive disruption of the world economy by the COVID-19
pandemic caused by SARS-CoV-2, scientists are yet to come out with an effective therapeutic
against this viral disease. Several vaccines have obtained ‘emergency approval’, but
difficulties are being faced in the even distribution of vaccines amongst high- and lowincome countries. On top of it, comorbidities associated with COVID-19 like diabetes,
hypertension and malaria can seriously impede the treatment of the main disease, thus
increasing the fatality rate. This is more so in the context of sub-Saharan African and south
Asian countries. Our objective was to demonstrate that a single plant containing different
phytoconstituents may be used for treatment of COVID-19 and comorbidities. Towards initial
selection of a plant, existing scientific literature was scanned for reported relevant traditional
uses, phytochemicals and pharmacological activities of a number of plants and their
phytoconstituents pertaining to treatment of COVID-19 symptoms and comorbidities.
Molecular docking studies were then performed with phytochemicals of the selected plant
and SARS-CoV-2 components – Mpro, and spike protein receptor binding domain and hACE2
interface using AutoDock Vina. We showed that crude extracts of an indigenous African
plant, Costus afer having traditional antidiabetic and antimalarial uses, has phytochemicals
with high binding affinities for Mpro, and/or spike protein receptor binding domain and
hACE2 interface; the various phytochemicals with predicted high binding energies include
aferoside C, dibutyl phthalate, nerolidol, suginal, and ±-terpinene, making them potential
therapeutics for COVID-19. The results suggest that crude extracts and phytochemicals of C.
afer can function as a treatment modality for COVID-19 and comorbidities like especially
diabetes and malaria.
3.Molecular detection, risk factors, and phylogenetic analysis of tick-borne pathogens in dogs from northern Vietnam
Do, T. ; Bui, K.L. ; Zafar, I. ; Inpankaew, T. ; Galon, M.E. ; Ta, P.A. ; Tran, K.T. ; Hasan, T. ; Shengwei, J. ; Ma, Z. ; Hang, L. ; Amer, M.M. ; Ma, Y. ; Mohanta, K.U. ; El Sayed, A.E.S. ; Xuan, X.
Tropical Biomedicine 2024;41(No.1):52-63
In tropical regions, numerous tick-borne pathogens (TBPs) play a crucial role as causative agents of
infectious diseases in humans and animals. Recently, the population of companion and pet dogs has
significantly increased in Vietnam; however, information on the occurrence of TBPs is still limited. The
objectives of this investigation were to determine the occurrence rate, risk factors, and phylogenetic
characteristics of TBPs in dogs from northern Vietnam. Of 341 blood samples tested by PCR, the total
infection of TBPs was 73.9% (252/341). Babesia vogeli (18SrRNA gene – 30.5%) was detected most
frequently in studied dogs followed by Rickettsia spp. (OmpA gene – 27%), Anaplasma platys (groEL
gene – 22%), Bartonella spp. (16SrRNA – 18.8%), Mycoplasma haemocanis (16SrRNA – 9.4%) and
Hepatozoon canis (18SrRNA gene – 1.2%), respectively. All samples were negative for Ehrlichia canis and
Anaplasma phagocytophylum. Co-infection was detected in 31.4% of the samples (107/341) of which,
A. platys/Bartonella spp. (34/94,10%), Rickettsia spp./B. vogeli (19/94, 5.6%), and M. haemocanis/B.
vogeli (19/94, 5.6%) were recorded as the three most frequent two species of co-infection types.
Statistical analysis revealed a significant correlation between TBP infection and several host variables
regarding age, breed, and living area in the current study. The recent findings reported herein, for the
first time in Vietnam, are essential for local veterinarians when considering the appropriate approaches
for diagnosing these diseases. Furthermore, this data can be used to establish control measures for
future surveillance and prevention strategies against canine TBPs in Vietnam.