1.An eight-year review of blood culture and susceptibility among sepsis cases in an emergency department in North eastern Malaysia
Hashairi, F.* ; Hasan, H. ; Azlan, K. ; Deris, Z.Z.
Tropical Biomedicine 2011;28(3):599-605
An understanding of common pathogens and their antibiotic sensitivity patterns is
critical for proper management of sepsis in Emergency Department (ED). The goal of the
study was to identify common organisms isolated from blood cultures of patients attended to
ED and their antimicrobial susceptibility. Beginning from 2002, all cases of positive blood
culture collected by the ED, Hospital Universiti Sains Malaysia (HUSM) were recorded and
analysed. Over the period of eight years, we documented 995 cases of positive blood cultures.
Of these samples, 549 (55.2%) were Gram-negative bacteria; 419 (42.1%) were Gram-positive
bacteria; 10 (1.0%) were anaerobic organisms; 10 (1.0%) were fungus; and 7 (0.7%) cases
were mixed organisms. Gram-negative bacteria were observed to develop more resistance to
antimicrobial agents, especially those commonly used in an outpatient setting with less than
80% sensitivity to ampicillin, cotrimoxazole and ciprofloxacin. By contrast, there has been no
marked change in the sensitivity trends of Gram-positive bacteria over the same period. In
conclusion, ED physicians are more equipped to initiate empirical antimicrobial therapy
especially when dealing with possibility of Gram-negative sepsis.
2.Endoscopic Ultrasound-Guided Fine Needle Aspiration in Cystic Pancreatic Lesions.
Robert H HAWES ; James CLANCY ; Muhammad K HASAN
Clinical Endoscopy 2012;45(2):128-131
Incidental pancreatic cysts are being increasingly recognized recently with incremented concern about health and frequent health check-up. Endoscopic ultrasound (EUS) has emerged as the principal modality for imaging pancreas for various pancreatic diseases including pancreatic cyst. But imaging alone cannot accurately identify the exact nature of the pancreatic cyst. EUS-guided fine needle aspiration is a useful adjunctive procedure to differentiate pancreatic cystic lesions. Cystic fluid analysis with cytologic evaluation is important to diagnose etiology of pancreatic cystic lesions, helping the clinician to more accurately assess the presence or potential for malignancy.
Biopsy, Fine-Needle
;
Endoscopic Ultrasound-Guided Fine Needle Aspiration
;
Endosonography
;
Pancreas
;
Pancreatic Cyst
;
Pancreatic Diseases
3.Translation and Validation of Enhanced Asian Rome III Questionnaires in Bengali Language for Diagnosis of Functional Gastrointestinal Disorders.
M Masudur RAHMAN ; Uday C GHOSHAL ; A H M ROWSHON ; Faruque AHMED ; Md Golam KIBRIA ; Mahmud HASAN ; Kok Ann GWEE ; William E WHITEHEAD
Journal of Neurogastroenterology and Motility 2016;22(2):240-247
BACKGROUND/AIMS: Functional gastrointestinal disorders (FGIDs), diagnosed by symptom-based criteria due to lack of biomarkers, need translated-validated questionnaires in different languages. As Bengali, the mother tongue of Bangladesh and eastern India, is the seventh most spoken language in the world, we translated and validated the Enhanced Asian Rome III questionnaire (EAR3Q) in this language. METHODS: The EAR3Q was translated in Bengali as per guideline from the Rome Foundation. The translated questionnaire was validated prospectively on Bengali-speaking healthy subjects (HS, n = 30), and patients with functional dyspepsia (FD, n = 35), irritable bowel syndrome (IBS, n = 40) and functional constipation (FC, n = 12) diagnosed by clinicians using the Rome III criteria. The subjects were asked to fill-in the questionnaire again after 2 weeks, to check for its reproducibility. RESULTS: During translation, the original and the backward translated English versions of the questionnaire demonstrated high concordance. Sensitivity of the Bengali questionnaire to diagnose patients with FD, IBS, FC, and HS was 100%, 100%, 75%, and 100%, respectively, considering diagnosis by the clinicians as the gold standard. On test-retest reliability analysis, Kappa values for FD, IBS, FC, and HS were 1.0, 1.0, 0.83, and 1.0, respectively. The Bengali questionnaire detected considerable overlap of FD symptoms among patients with IBS, IBS among patients with FD, and FD among patients with FC, which were not detected by the clinicians. CONCLUSIONS: We successfully translated and validated the EAR3Q in Bengali. We believe that this translated questionnaire will be useful for clinical evaluation and research on FGIDs in the Bengali-speaking population.
Asian Continental Ancestry Group*
;
Bangladesh
;
Biomarkers
;
Constipation
;
Diagnosis*
;
Dyspepsia
;
Gastrointestinal Diseases*
;
Humans
;
India
;
Irritable Bowel Syndrome
;
Mothers
;
Prospective Studies
;
Tongue
4.Association of Polymorphisms within the Serotonin Receptor Genes 5-HTR1A, 5-HTR1B, 5-HTR2A and 5-HTR2C and Migraine Susceptibility in a Turkish Population.
Yavuz YÜCEL ; Salih COŞKUN ; Beyhan CENGIZ ; Hasan H ÖZDEMIR ; Ertuğrul UZAR ; Abdullah ÇIM ; M Akif CAMKURT ; M Ufuk ALUCLU
Clinical Psychopharmacology and Neuroscience 2016;14(3):250-255
OBJECTIVE: Migraine, a highly prevelant headache disorder, is regarded as a polygenic multifactorial disease. Serotonin (5-HT) and their respective receptors have been implicated in the patogenesis. METHODS: We investigated the 5-HT1A, 5-HT1B, 5-HT2A, and 5-HT2C receptor gene polymorphisms and their association with migraine in Turkish patients. The rs6295, rs1300060, rs1228814, rs6311, rs6313, rs6314, rs6318, rs3813929 (−759C/T) and rs518147 polymorphisms were analyzed in 135 patients with migraine and 139 healthy subjects, using a BioMark 96.96 dynamic array system. RESULTS: We found no difference in the frequency of the analyzed eight out of nine polymorpisms between migraine and control groups. However, a significant association was found between the rs3813929 polymorphism in the promoter region of 5-HTR2C gene and migraine. Also, the allele of rs3813929 was more common in the migraine group. CONCLUSION: This result suggests that the 5-HTR2C rs3813929 polymorphism can be a genetic risk factor for migraine in a Turkish population.
Alleles
;
Genetic Association Studies
;
Headache
;
Headache Disorders
;
Healthy Volunteers
;
Humans
;
Migraine Disorders*
;
Polymorphism, Single Nucleotide
;
Promoter Regions, Genetic
;
Receptor, Serotonin, 5-HT2C
;
Risk Factors
;
Serotonin*
5.Detection of bone marrow involvement with FDG PET/CT in patients with newly diagnosed lymphoma.
H Tahsin ÖZPOLAT ; Ebru YILMAZ ; Hasan Sami GOKSOY ; Sahre ÖZPOLAT ; Oner DOGAN ; Seher Nilgun UNAL ; Meliha NALCACI
Blood Research 2018;53(4):281-287
BACKGROUND: Bone marrow involvement (BMI) affects the lymphoma stage, survival, and treatment. Bone marrow biopsy (BMB) and fluorodeoxyglucose (FDG) positron emission tomography- computed tomography (PET/CT) are useful techniques to detect BMI. Both have advantages and disadvantages. We aimed to identify factors that could be used to predict BMI with positive and negative results on PET/CT compare them with BMB in newly diagnosed patients with lymphoma. METHODS: We included 22 non-Hodgkin and 16 Hodgkin lymphoma patients in this single center study. All patients had PET/CT examination and BMB before treatment. BMI in BMB was reported as negative or positive. Bone marrow was classified into 3 types by FDG uptake on PT/CT; diffuse involvement, focal involvement, and normal bone marrow. RESULTS: PET/CT and BMB results were concordant (7 positive, 15 negative) in 22 patients (57%). We evaluated concordant and discordant patient characteristics and risk-stratified patients for BMI. Our findings suggest that patients with diffuse FDG uptake on PET/CT, especially patients with advanced age and low platelet and white blood cell counts, are likely to have BMI and could potentially forego BMB. Patients with negative PET/CT findings and no significant laboratory abnormalities are very unlikely to have BMI. CONCLUSION: Our results suggest that BMI should not be decided solely based PET/CT or BMB findings. It is reasonable to use both diagnostic assays along with clinical and laboratory findings. PET/CT result, clinical and laboratory findings could be useful for predicting BMI in patient for whom BMB is contraindicated.
Biopsy
;
Blood Platelets
;
Bone Marrow*
;
Electrons
;
Hodgkin Disease
;
Humans
;
Leukocyte Count
;
Lymphoma*
;
Positron-Emission Tomography and Computed Tomography*
6.Mediastinal parathyroid adenoma: diagnostic and management challenges.
S Che KADIR ; B E MUSTAFFA ; Z GHAZALI ; Z HASAN ; A H IMISAIRI ; S MUSTAFA
Singapore medical journal 2011;52(4):e70-4
Primary hyperparathyroidism due to ectopic parathyroid adenomas can pose diagnostic and management challenges, especially when imaging studies have localised the lesions to different sites. We report a case of symptomatic hypercalcaemia due to a mediastinal parathyroid adenoma. Ultrasonography identified a nodule posterior to the right thyroid gland. However, computed tomography and technetium-99m sestamibi scintigraphy revealed an ectopic parathyroid adenoma located in the anterior mediastinum. The adenoma was successfully removed through a median sternotomy. However, postoperatively, the patient developed prolonged symptomatic hypocalcaemia, possibly due to suppression of the normal parathyroid gland function, although the presence of concomitant hungry bone syndrome was possible. The histopathology of the mediastinal mass was consistent with a parathyroid adenoma.
Calcium
;
blood
;
Female
;
Humans
;
Hypercalcemia
;
etiology
;
Hyperparathyroidism
;
diagnosis
;
Hypocalcemia
;
drug therapy
;
etiology
;
Mediastinal Neoplasms
;
diagnosis
;
diagnostic imaging
;
surgery
;
Middle Aged
;
Parathyroid Glands
;
pathology
;
Parathyroid Neoplasms
;
diagnosis
;
diagnostic imaging
;
surgery
;
Postoperative Complications
;
Technetium Tc 99m Sestamibi
;
pharmacology
;
Tomography, X-Ray Computed
;
Ultrasonography
7.Bone Mineral Density in Patients with Pediatric Inflammatory Bowel Disease Using Dual Energy X-Ray Absorptiometry
Hasan M. ISA ; Amira A. EZZALDIN ; Mohamed M. ALABBASI ; Noora H. ALAAZMI ; Abdulrahman S. MASOOD ; Hissa M. ALABBASI
Journal of Bone Metabolism 2023;30(1):59-68
Background:
Inflammatory bowel disease (IBD) is a chronic inflammatory immune-mediated condition that affects the gastrointestinal system and alters bone growth and bone mineral density (BMD). Here we aimed to study the prevalence and predictors of a low BMD in pediatric patients with IBD.
Methods:
This retrospective cross-sectional analytical study included pediatric patients with IBD in whom BMD was evaluated using dual energy X-ray absorptiometry of the total body and lumbar spine. Osteoporosis was defined as a BMD Z-score ≤-2, osteopenia as -2 to -1, and normal as >-1. Clinical and laboratory findings were compared between patients with and without osteoporosis.
Results:
Of the 48 patients, 30 (62.5%) were males, 35 (72.9%) had Crohn’s disease, and 13 (27.1%) had ulcerative colitis. The mean age at diagnosis was 9.9±2.8 years. The median age at the time of the BMD scans was 11.9 (interquartile range, 9.9–14.3) years. Total body BMD scans identified 13 (27.1%) and 16 (33.3%) patients with osteoporosis and osteopenia, respectively. Spinal BMD scans revealed that 17 (39.5%) and 14 (32.6%) patients had osteoporosis and osteopenia, respectively. A low body mass index (BMI) Z-score (p=0.038), ileocolonic disease location (p=0.008), and a low calcium level (p=0.008) were significant predictors of osteoporosis on the total body BMD scans. A low BMI Z-score (p=0.039), decreased hemoglobin level (p=0.018), low calcium level (p=0.033), and infliximab use (p=0.019) were significant predictors of osteoporosis on the spinal BMD scans.
Conclusions
This study showed a high prevalence of low BMD among pediatric patients with IBD. A low BMI, ileocolonic disease location, low hemoglobin and calcium levels, and infliximab use were significantly associated with osteoporosis.
8.Escherichia fergusonii identified in preputial swabs from healthy Aceh cattle by phylogenetic 16S rRNA analysis
Ummu BALQIS ; Muhammad HAMBAL ; Masda ADMI ; Nellita MEUTIA ; Mohd. Agus Nashri Abdullah ; T. Reza FerasyiTriva Murtina Lubis ; Mahdi ABRAR
Malaysian Journal of Microbiology 2018;14(3):229-235
Aims:Thisstudy aimed to assess the risk of reproductive tract contamination in Aceh cattle by Escherichia fergusoniias revealed by 16S rRNA gene sequencing of preputial swab samples.Methodology and results:Preputial swabs taken from 50 breeding bulls at the Indrapuri Breeding and Forage Center of Aceh Cattle, Banda Aceh, Indonesia, were examined for the presence of bacteria. Samples were streaked on MacConkey agar and incubated under aerobic conditions at 37°C for 24 h. Smooth,yellow-or rose-colored colonies were selected for their characteristic appearance andsubjected to further analysis. Genetic identification was based on 16S rRNA gene sequencing and PCR analysis. We conducted a 16S rRNA sequence similarity search with GenBank using BLAST and constructed neighbour-joining dendrogramsusing MEGA. From among closely related species of the genus Enterobacteriaceae, we identified the enteric bacterium E. fergusoniias having the highest sequence similarity.Conclusion, significance and impact of study:We concluded that the E. fergusoniibacterium positively presence in preputial swab samples of clinically healthyAceh cattle population. Accordingly, it is potentially allowing the bacterium to be spread during natural mating or semen collection processing for artificial insemination in cattle breeding farm
9.Ankle Arthrodesis using Ilizarov Ring Fixator: A Primary or Salvage Procedure? An Analysis of Twenty Cases
Hasan O ; Fahad S ; Sattar S ; Umer M ; Rashid H
Malaysian Orthopaedic Journal 2018;12(3):24-30
Introduction: Ankle arthrodesis using the Ilizarov technique provides high union rate with the added benefits of early weight-bearing, and the unique advantage of its ability to promote regeneration of soft tissue around the bone, including skin, muscle and neuro-vascular structures, and its versatility to allow correction of the position of the foot by adjusting the frame post-operatively as needed. We describe our experience with this technique and the functional outcomes in our patients. Materials and Methods: This retrospective study was conducted in 20 ankle fusion cases using the Ilizarov method between the years 2007 and 2017. We defined success in treatment by loss of preoperative symptoms and radiological union on plain radiographs of the ankle. Results: Fusion was achieved in all patients (100%). Immediate post-operative ambulation was with full weight bearing (FWB) in 16 (83%) of the participants and non-weight bearing (NWB) in 3 patients (17%). Postprocedure 11 patients (67%) of the participants who were full weight bearing required some form of support for walking for 2-3 weeks. Post-operatively three patients had pin tract infection requiring intravenous antibiotics. Radiological union took range of 6-12 weeks, mean union time was 8 weeks. Only one patient required bone grafting due to bone loss. Average follow-up period was 10-45 months. Conclusion: The Ilizarov technique has a high union rate and leads to general favourable clinical outcome and may be considered for any ankle arthrodesis but is especially useful in complex cases such as for revisions, soft-tissue compromise, infection and in patients with risk for non-union. Early weight bearing is an extra benefit.
10.Screening of nematophagous-fungi from fresh faeces of grazing animals and soils
Farah Haziqah, M.T ; Nur Hikmah, A.M. ; Mat Hasan, H. ; Hamdan, A. ; Nik Him, N.A.I.I
Tropical Biomedicine 2019;36(3):687-693
An investigation was undertaken for screening and isolating nematophagous-fungi
from the faecal samples of various grazing animals and soils in Malaysia. Total of 111 faeces
and 50 soil samples were collected and the samples were cultured on 2% water agar plates.
The growth of nematophagous-fungi was stimulated by sprinkling-baiting technique. The
conidia of suspected nematophagous-fungi were inoculated on 2% water agar plates. All
isolated were maintained on 2% cornmeal agar plates. Verticillium spp., Fusarium spp. and
Arthrobotrys spp. were identified from the faecal and soil samples. 62.5% of the faecal
samples and 100% of the soil samples were shown to be positive with nematophagous-fungi.
This study highlights the present of nematophagous-fungi population in faecal and soil samples.
Much study remains to be done to better understanding some fungi especially their mode of
action and their predatory behaviour against parasitic nematodes.