1.Genetic Epidemiological Study on Type 2 Diabetes Mellitus
Ming YU ; Zhenshan JIAO ; Hanfang JU
Chinese Journal of Prevention and Control of Chronic Diseases 2006;0(01):-
Objective To study the effect of the genetic factors on the occurrence and development of type 2 diabetes mellitus(T2DM) and its general genetic pattern.Methods 21 T2DM cases,as proband,were investigated for T2DM genealogical tree.The heritability of T2DM was estimated by Falconer method.T2DM segregation rate and genetic pattern were evaluated with Penrose's method,Li-Mantel-Gart method and the threshold value model method of Jiang San-Duo.Results The prevalent rate of T2DM in first-degree relatives was 7.6%,which was higher than that in general population.The heritability of T2DM was 46.8%.The s/q score was 3.312 with Penrose's method,which was near to 1/q1/2.The segregation rate P was 0.131,which was lower than 0.25.The theoretical prevalent rate in first relatives was 8.0%,while the investigated prevalent rate was 7.6%.Conclusion There is an obvious heritable trend in T2DM.It is fit to the multi-factorial inheritance pattern but the mono-gene heritability model.
2.Research Advance of Mycobacterium Tuberculosis L-forms
Hanfang JU ; Defu ZHAO ; Xiexiu WANG
Journal of Environment and Health 1989;0(06):-
Mycobacterium tuberculosis L-forms(MTB-L), which has a deficient cell wall, shows various forms, various colors by acid-fast stain, osmosis pressure sensitivity and can not grow in normal isotonic culture medium, for all of the characters, misdiagnosis, underdiagnosis, difficulties of cure and recurrence became the crucial problems in the prevention and control of pulmonary tuberculosis. The recent research works on structure, biology, clinic, epidemiology and determination of MTB-L were reviewed in the present paper.
3.Species identification of microorganisms in MGIT960 positive tubes by MALDI-TOF MS method
JU Hanfang ; MU Cheng ; ZHAO Hui ; JIANG Lina ; WANG Chunhua
China Tropical Medicine 2023;23(11):1157-
Abstract: Objective To analyze the species distribution of microorganisms in culture tubes reported positive byBACTEC™ MGIT960 (hereafter referred to as "MGIT960") after species identification using matrix-assisted laser desorption/ionization time of flight massspectrometry (MALDI-TOF MS) technique. Methods From 2021 to 2022, a total of 2 662 positive tubes reported by the MGIT 960 instrument at Tuberculosis Reference Laboratory of Tianjin Center for Tuberculosis Control were collected. Liquid cultures were independently inoculated to blood plate and neutral L-J medium, and the resulting isolate strains were identified using the MALDI-TOF MS method. According to the MALDI-TOF MS results, the non-repetitive results of the same patient on the same culture medium were analyzed for the composition ratio of strain distribution. For the strains not identified by MALDI-TOF MS, 38 strains were selected for 16S rRNA gene sequencing. Results A total of 605 isolates were obtained from blood plates, and 501 of those were analyzed. Among them, Mycobacterium accounted for 17.76% (89/501), predominant by Mycobacterium abscess 10.18% (51/501) and Mycobacterium fortuitum 3.19% (16/501). Bacteria other than Mycobacterium accounted for 68.06% (341/501), with the main ones being Nocardia farcinica 15.57% (78/501), Gordonia sputa 9.38% (47/501) and Gordonia bronchialis 7.58% (38/501). There were 71 unidentifiable strains, making up 14.17% (71/501). A total of 2 378 strains were isolated from neutral L-J mediums, 1 748 of which were used in the incoming analysis. Among these, 78.72% (1 376/1 748) were Mycobacterium, 60.53% (1 058/1 748) were Mycobacterium tuberculosis (MTB), 4.69% (82/1 748) were Mycobacterium chimaer intracellulare group and 3.55% (62/1 748) were Mycobacterium Lentiflavum. Bacteria other than Mycobacterium accounted for 17.11% (299/1 748) in neutral L-J medium isolates, with Nocardia farcinica 4.35% (76/1 748), Gordonia sputa 2.69% (47/1 748) and Gordonia bronchialis 2.12% (37/1 748) as the main species. There were 73 strains that couldn't be identified, comprising 4.18% (73/1 748). The 38 strains that not identified by MALDI-TOF MS were all found to be Actinobacteria and Firmicutes by sequencing. Conclusions A variety of nontuberculous Mycobacterium and bacteria other than Mycobacterium were found in the positive culture tubes reported by the MGIT960 instrument, most of which could be quickly identified by mass spectrometry. Bacteria other than Mycobacterium are mainly Nocardia and Gordonia, which should be paid attention to in differential diagnosis.
4.Association of drug efflux pump gene expression with Mycobacterium tuberculosis drug resistance
Guilian LI ; Xiexiu WANG ; Tong XIE ; Hanfang JU ; Hui ZHAO ; Cheng MU ; Defu ZHAO
Chinese Journal of Laboratory Medicine 2011;34(7):605-611
Objectives To explore the associations between drug efflux pump gene expression and phenotypic drug resistance as well as gene mutation patterns related to drug resistance of Mycobacterium tuberculosis.Methods Forty-five Mycobacterium tuberculosis isolates resistant to one or more of drugs including isoniazid, rifampicin, streptomycin and ethambutol, and 26 isolates all sensitive to the above four drugs from Tianjin Tuberculosis Control Institute in 2007 were involved in this study. Direct sequencing was applied to detect the mutations in the corresponding resistance genes(isoniazid:katG, inhA, oxyR-ahpC, ndh, rifampicin:rpoB, streptomycin:rpsL, rrs, and ethambutol:embB, embC and embA). After RNA extration and reverse transcription, real-time PCR was conducted to assess the expressions of putative drug efflux pump genes Rv1410c, Rv2136c, Rv0783c and Rv2136c, and Students' t test and ANOVA analysis were used to analyze the expression differences in Mycobacterium tuberculosis with different phenotypic drug resistance and drug resistance related gene mutation patterns.Results Compared to pan-sensitive isolates[(5.67±3.29)×10-5], Rv1410c showed higher expression in streptomycin[(8.48±6.33)×10-5, t'=2.18, P<0.05], isoniazid[(8.43±6.38)×10-5, t'=2.20, P<0.05], rifampicin[(9.59±7.27)×10-5, t'=2.29, P<0.05], multi-drug[(10.37±7.86)×10-5, t'=2.34, P<0.05] resistant isolates, and in isoniazid + streptomycin resistant isolates[(9.39±6.81)×10-5, t'=2.43, P<0.05];Rv2136c showed higher expression in isoniazid resistant[(3.51±2.43)×10-5, t'=2.03, P<0.05], multidrug-resistant isolates[(4.21±2.94)×10-5, t'=2.22, P<0.05] and resistant to isoniazid+streptomycin[(3.81±2.46)×10-5, t'=2.28, P<0.05] isolates . The expression of Rv0783c in rifampicin resistant isolates with rpoB 531 mutations [(5.41±3.03)×10-6] was higher than those with wild type of rpoB 531[(2.29±1.62)×10-6, t=2.81, P<0.05].Conclusions The expression of Rv1410c and Rv2136c are associated with mutiple-drug resistance of Mycobacterium tuberculosis.The expression of Rv0783c in rifampicin resistant isolates is associated with mutation in rpoB 531.