1.Research on fast implementation method of image Gaussian RBF interpolation based on CUDA.
Journal of Biomedical Engineering 2014;31(2):237-244
Image interpolation is often required during medical image processing and analysis. Although interpolation method based on Gaussian radial basis function (GRBF) has high precision, the long calculation time still limits its application in field of image interpolation. To overcome this problem, a method of two-dimensional and three-dimensional medical image GRBF interpolation based on computing unified device architecture (CUDA) is proposed in this paper. According to single instruction multiple threads (SIMT) executive model of CUDA, various optimizing measures such as coalesced access and shared memory are adopted in this study. To eliminate the edge distortion of image interpolation, natural suture algorithm is utilized in overlapping regions while adopting data space strategy of separating 2D images into blocks or dividing 3D images into sub-volumes. Keeping a high interpolation precision, the 2D and 3D medical image GRBF interpolation achieved great acceleration in each basic computing step. The experiments showed that the operative efficiency of image GRBF interpolation based on CUDA platform was obviously improved compared with CPU calculation. The present method is of a considerable reference value in the application field of image interpolation.
Algorithms
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Image Processing, Computer-Assisted
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Imaging, Three-Dimensional
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Normal Distribution
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Software
2.Research on K-means clustering segmentation method for MRI brain image based on selecting multi-peaks in gray histogram.
Zhaoxue CHEN ; Haizhong YU ; Hao CHEN
Journal of Biomedical Engineering 2013;30(6):1164-1170
To solve the problem of traditional K-means clustering in which initial clustering centers are selected randomly, we proposed a new K-means segmentation algorithm based on robustly selecting 'peaks' standing for White Matter, Gray Matter and Cerebrospinal Fluid in multi-peaks gray histogram of MRI brain image. The new algorithm takes gray value of selected histogram 'peaks' as the initial K-means clustering center and can segment the MRI brain image into three parts of tissue more effectively, accurately, steadily and successfully. Massive experiments have proved that the proposed algorithm can overcome many shortcomings caused by traditional K-means clustering method such as low efficiency, veracity, robustness and time consuming. The histogram 'peak' selecting idea of the proposed segmentootion method is of more universal availability.
Algorithms
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Brain
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anatomy & histology
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Cluster Analysis
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Humans
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Magnetic Resonance Imaging
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Neuroimaging
3.Vulnerability of Atherosclerotic Plaque Through Contrast-enhanced Ultrasonography
Yu DING ; Lei FENG ; Haizhong ZHANG ; Yan SUN ; Cuiyun LIN ; Jianhong HAN
Chinese Journal of Medical Imaging 2015;(4):298-301
Purpose To investigate the feasibility to diagnose and evaluate the vulnerability of the atherosclerotic plaque through contrast-enhanced ultrasonography. Materials and Methods Thirty-four patients with carotid atherosclerosis were enrolled in the study to take contrast-enhanced ultrasonography and were observed on whether the plaque was enhanced and the features of its enhancement. The peak intensity (PI), time to peak (TTP), and density echo (DE) were calculated according to the time-intensity curve with QLAB software. Results The ratio of enhanced malacoplakia and the mixed plaque showed no difference (χ2=0.847, P>0.05). The percentages of enhanced plaque distributed on the base, tail and the shoulder were 70.0%, 23.3% and 6.7%, respectively with significant difference (χ2=29.100, P<0.001); the distribution ratio of enhanced plaque from high to low were as follows: the plaque on the shoulder > the plaque on the base> the plaque on the tail. It was positively correlated between enhanced plaque and its distribution (r=0.404, P<0.01). The TTP of the ROI between the malacoplakias and the mixed plaques showed no difference (t=0.479, P>0.05). The PI and DE of the ROI in the malacoplakia and the mixed plaques were analyzed by the time-intensity curve and the differences proved to be statistically significant (t=7.497 and 12.224, P<0.05). Conclusion Contrast-enhanced ultrasonography could present the neovessels in the atherosclerotic plaque, which is helpful in evaluating the vulnerability of atherosclerotic plaque.
4.The effects of scutellarin on Bcl-2 and Bax expression in human tongue squamous carcinoma Tca-8 1 1 3 cells
Zhihua GE ; Ying ZHANG ; Junmei LI ; Ning YANG ; Haizhong YU ; Jianing YANG
Journal of Practical Stomatology 2014;(5):649-652
Objective:To investigate the effects of scutellarin on Bcl-2 and Bax expression in human tongue squamous carcinoma Tca-8113 cell.Methods:Tca8113 cells were treated with 80,120 and 160μg/ml scutellarin for 48 h respectively.Immunocytochem-istry method and RT-PCR were applied to observe the expression of Bcl-2 and Bax protein and mRNA in the cells.Results:With the increase of scutellarin concentration,Bcl-2 protein and mRNA decreased(P<0.05),Bax protein and mRNA increased(P<0.05). Conclusion:Scutellarin may downregulate Bcl-2 expression and upregulate Bax expression in Tca-8113 cells.