1.Study of Hepatitis C Virus Infection at a Tertiary Hospital: Genotyping, Risk Factors and Comorbidities
AR Siti Nurul Fazlin ; H Hairul Aini ; MM Mohammed Imad
The International Medical Journal Malaysia 2017;16(1):11-20
Introduction: Hepatitis C virus (HCV) genotyping is very important for the clinical management of HCVinfected
patients. The aim of this study was to determine the genotypes of HCV-infected patients and to
identify their risk factors and comorbidities. Materials and Methods: This was an observational, cross
sectional study in which forty (40) HCV-infected patients attending Gastroenterology Clinic, Hospital Tengku
Ampuan Afzan (HTAA) Kuantan Pahang were recruited for the study, from January to July 2014. Nucleotide
sequence analysis of the 5’UTR and NS5B region were performed to identify the viral genotypes. Results: Of
the 40 samples, 31 (77.5%) isolates were successfully classified into their genotypes and subtypes; 3a
(57.5%), 1a (12.5%), 3b (2.5%) and 1b (2.5%). No genotype 2, 4, 5 and 6 were found in this study. However,
there was one mixed-genotype (3a/1a) HCV infection. Risk factors and co-morbidities found in this study
include IVDUs, haemodialysis, blood transfusion, surgery and co-infection with HIV. Conclusion: Genotype 3
followed by genotype 1 were the common HCV genotypes found in this study population. Furthermore, the
highest risk factors and co-morbidities were IVDUs and co-infection with HIV.
2.Mixed-genotypes Infections with Hepatitis C Virus in Hemodialysis Subjects
Hairul Aini H ; Mustafa M I A ; Seman M R ; Nasuruddin B A
The Medical Journal of Malaysia 2012;67(2):199-203
Mixed-genotypes hepatitis C virus (HCV) infections are
normally ignored in chronic hemodialysis patients. The aim
of this study is to investigate the prevalence of mixedgenotypes infections among hemodialysis patients in Pahang province, Malaysia. Reverse-transcription and polymerase chain reaction methods were performed using two different sets of primers, targeting the 5’ untranslated region and nonstructural 5B region. Target region base sequences were obtained by direct sequencing. Discrepancy in outcomes from phylogenetic analysis of both regions suggests double infections. Of 40 subjects in eight hemodialysis centres, evidence of mixed-genotypes infections was found in 5 subjects (12.5%) from three different centres. Four patients were infected with mixed genotypes 3 and 1 and one with genotypes 3 and 4. Cases of mixed HCV genotypes infection were considered high among hemodialysis patients in Pahang. However, further investigation is needed to confirm
whether they are true mixed infections or perhaps infection
with recombinant virus and also to assess the
clinicopathologic characteristics of the infection.