1.Establishment of the methodology for quantifying lentiviral vector transcriptional read-through rate.
Jiaping HE ; Yudan FANG ; Fan ZHANG ; Fengqiang SUN ; Juan WANG ; Jingzhi ZHANG
Chinese Journal of Biotechnology 2013;29(7):1006-1015
As an effective vehicle for bio-research and for gene therapy, Lentiviral Vector (LV) has been drawn large attention in recent years. However, transcriptional read-through limits its application. In order to understand the extend of LV read-through in chromosome, a reliable method to assess transcriptional read-through rate is needed. Here, we report the method as follows: 293T cells were transfected with the lentiviral transfer vectors which borne with two LTRs at its two ends in order to mimic the state of "proviral vectors" in chromosome. Using the primers specific for 3'U5 and 3'U3, read-through and total transcripts were reverse transcribed, respectively. These two cDNAs were quantified by realtime PCR using the primers and probe specific for 5'end of 3'U3. Read-through rate was then calculated by the division of the two. Meanwhile, read-through product of green fluorescence protein was also analyzed by Fluorescence Activated Cell Sorter. They both reciprocally proved the principal and confirmed that self-inactivated LV appeared higher read-through rate than the wild type one. The method described in this article, therefore, provides a useful technique to study how to reduce read-through rate, and improve the bio-safety of LV.
Flow Cytometry
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Genetic Therapy
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Genetic Vectors
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Green Fluorescent Proteins
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biosynthesis
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HEK293 Cells
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Humans
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Lentivirus
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Transfection
2.Influence of fluorescent protein expression on the proliferation of NIH3T3 cells in vitro.
Xiao-jun DUAN ; Liu YANG ; Yue ZHOU ; Kang-lai TANG ; Dong-wu WANG
Chinese Journal of Burns 2005;21(5):374-377
OBJECTIVETo investigate the influence of fluorescent protein expression on the proliferation of murine NIH3T3 cells, so as to provide a theoretical basis for cell tracing technology.
METHODSNIH3T3 cells were cultured in vitro, and were randomly divided into control, pLEGFP-N1 (with transfection of pLEGFP-N1 retroviral vector), pEGFP-N1 (with transfection of pEGFP-N1 vector) and pDsRed2-C1 (with transfection of pDsRed2-C1 vector) groups. Then the cells were screened by G418 for 3 weeks. The changes in cell adhesive rate were observed and the population doubling times was determined by growth curve.
RESULTSThere was obvious fluorescent protein expression in the transfected NIH3T3 cells after G418 selection, and the highest percentage of labeled NIH3T3 cells was found in pLEGFP-N1 group. The population doubling time in pDsRed2-C1 (40.3+/-0.7 h) , PEGFP-N1 (39.6 +/- 0.6 h) and pLEGFP-N1 (36.5 +/- 0.7 h) groups was evidently longer than that in control (27.9 +/- 0.6 h, P < 0.01), with high adhesive rate in each group.
CONCLUSIONThe expression of fluorescent protein exhibited some inhibitory effect on the proliferation of NIH3T3 cells in vitro. Since the inhibitory effect by retroviral vector was weaker compared with eukaryotic vector, it should be the first choice for fluorescent protein labeling during cell transplantation.
Animals ; Cell Culture Techniques ; Cell Proliferation ; Green Fluorescent Proteins ; biosynthesis ; Mice ; NIH 3T3 Cells ; Transfection
3.Microfluidic chip for detecting the expression of green fluorescent protein in Bacillus subtilis.
Huijun DONG ; Jinglin FU ; Yongquan LI ; Junyun JIANG
Chinese Journal of Biotechnology 2009;25(7):1077-1081
Laser scanning confocal microscope (LSCM) is currently the only equipment to observe fluorescence. However, this technique has disadvantages such as high cost and long test process. In this study, we developed a new system of laser-induced fluorescence (LIF) for microfluidic chip applied to detecting the expression of green fluorescent protein (GFP) in Bacillus subtilis. This novel system was comprised of laser device, optics unit, microfluidic chip, photomultiplier and computer treatment unit. The tests indicated that microfluidic chip could detect the expression of GFP as sensitively as LSCM in Bacillus subtilis. Moreover, this LIF detection system could instead of PCR to identify the positive clone in this special case. Nevertheless, the LIF system only was suitable to detect the fluorescent strength of GFP, and could not meet the request of some cases for example protein location. Therefore, this system will be applied in environmental detection with microbe, drug discovery and other cases.
Bacillus subtilis
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isolation & purification
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metabolism
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Green Fluorescent Proteins
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biosynthesis
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genetics
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Microfluidic Analytical Techniques
;
methods
4.Improvement of baculovirus expression system and purification of IL-6 protein expressed in insect cells.
Ning YAO ; Lun-Guang YAO ; Yun-Chao KAN ; Wen-Ke ZHOU ; Yi-Peng QI
Chinese Journal of Biotechnology 2006;22(4):572-580
Based on site-specific transposition of an expression cassette into a baculovirus shuttle vector (Bacmid) which propagated in Escherichia coli, the Bac-to-Bac System provides a rapid and efficient method to generate recombinant baculoviruses and is widely used for high level expression of heterologous proteins. And the efficiency of recombinant baculovirus infecting cells plays an important role on the protein expression. In this study, we introduced an EGFP expression cassette driven by polyhedrin promoter into the p74 locus of Bacmid by homologous recombination. The target Bacmid-egfp was then transformed into E. coli DH10B containing the transposition helper plasmid to gain a new transposition receipt strain E. coli DH10Bac-egfp. Because of the intact attTn7 sites and lacZ', target gene cloned in a pFastBac vector can be transposed into the Bacmid-egfp shutter vector to construct recombinant baculovirus, which would allow the tracing of the target protein expression and the recombinant Bacmid transfection or recombinant baculoviral infection under fluorescence microscopes. Recombinant virus Bac-egfp-DsRed was constructed by transposing DsRed into the Bacmid-egfp in E. coliDHl0Bac-egfp, and the Sf9 cells infected with the recombinant virus expressed DsRed and EGFP efficiently. Another protein IL-6 fused with 6 x his tag was expressed and purified sucessfully from Sf9 cells infected with recombinant virus Bac-egfp-6 x his-IL6 constructed by the improved Bac-to-Bac system.
Animals
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Baculoviridae
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genetics
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Green Fluorescent Proteins
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genetics
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Interleukin-6
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biosynthesis
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genetics
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Plasmids
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Polymerase Chain Reaction
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Recombinant Proteins
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biosynthesis
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Spodoptera
5.Establishment of RAW264.7 cell line stably expressing Mycobacterium tuberculosis protein ESAT-6.
Hao LI ; Ying YIN ; Dayong DONG ; Jun ZHANG ; Ling FU ; Chenguang CAI ; Meng WANG ; Junjie XU ; Wei CHEN
Chinese Journal of Biotechnology 2011;27(9):1390-1396
For studying the effects of Mycobacterium tuberculosis secretory protein ESAT-6 on the related functions of macrophages, RAW264.7 cells were transfected with pEGFP-C1-ESAT-6 and pEGFP-C1 by liposome respectively. After screening with a high level of G418, the macrophage cell lines that stably expressed EGFP-ESAT-6 fusion protein or EGFP were established. The gene and protein expression levels were further analyzed by RT-PCR, fluorescence microscopy and Western blotting. The results indicated that the EGFP-ESAT6 fusion gene was integrated into the chromosome and the protein could be stably expressed in the selected macrophage cell line. These results gave us a tool for the future study in the mechanisms of ESAT-6 protein in modulating the macrophage cells.
Animals
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Antigens, Bacterial
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biosynthesis
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genetics
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Bacterial Proteins
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biosynthesis
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genetics
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Cell Line
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Green Fluorescent Proteins
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biosynthesis
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genetics
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Macrophages
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cytology
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metabolism
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Mice
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Recombinant Fusion Proteins
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biosynthesis
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genetics
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Transfection
6.Expression and location of UBAP1 protein associated with nasopharyngeal carcinoma.
Zhao-yang ZENG ; Jun QIAN ; Wei XIONG ; Yan-hong ZHOU ; Wen-ling ZHANG ; Xiao-ling LI ; Ke TANG ; Wei-fang LI ; Gui-yuan LI
Journal of Central South University(Medical Sciences) 2005;30(6):621-624
OBJECTIVE:
To analyze the expression and location of coding protein of UBAP1 gene and to understand the relationship between the expression pattern of the protein and cell carcinogenesis.
METHODS:
Bioinformatics was used to analyze the protein character to provide an available clue of subsequent research. The codon frame cDNA was amplified by PCR, and subcloned into enhance green fluorescence protein (EGFP) of pEGFP-C2. The recombinant plasmid was transfected into HNE1 cells. The expression of coding protein was observed by fluorescence microscopy.
RESULTS:
The expressed GFP-fusion protein generated striking green fluorescence in the cytoplasm in HNE1 cells. EGFP/UBAP1 was expressed and existed mainly in the nuclear, especially accumulated on the nuclear envelope.
CONCLUSION
The expression difference in HNE1 might be related to the carcinogenesis of NPC.
Base Sequence
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Carrier Proteins
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Green Fluorescent Proteins
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biosynthesis
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genetics
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Humans
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Molecular Sequence Data
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Nasopharyngeal Neoplasms
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metabolism
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Neoplasm Proteins
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biosynthesis
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genetics
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Recombinant Proteins
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biosynthesis
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genetics
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Transfection
7.Construction of a recombinant adenovirus carrying the Hantaan virus glycoprotein G2 gene and its expression in Hela cells.
Ting HUYAN ; Xiaoping XUE ; Kai SONG ; Hua WANG ; Hui YANG ; Wei WANG
Chinese Journal of Biotechnology 2009;25(10):1579-1585
We constructed the recombinant adenovirus expressing the glycoprotein G2 of Hantaan virus. Firstly we obtained coding gene fragment of G2 by PCR, and subsequently inserted the gene of interest into the Adenoviral pShuttle vector pAd5-CMV. Then we co-transfected the recombinant pShuttle vector and adenovirus skeleton plasmid into HEK293 cells by Calcium phosphate precipitation method. After the recombinant adenovirus were packaged and amplified in HEK293 cells, we observed the expression of reporter gene eGFP by fluorescent microscopy, and we obtained the recombinant adenovirus containing Hantaan virus glycoprotein G2. The recombinant adenoviruses were used to infect Hela cells and the expressed protein was detected by Indirect Immuno-fluorescence and Western blotting. The construct was confirmed at several levels: first restriction enzyme analysis demonstrated that the recombinant adenovirus vector was constructed correctly, second RT-PCR showed that the G2 gene could transcribe correctly in Hela cells. Then Fluorescent microscopy proved the expression of eGFP in the infected Hela cells. Finally, Indirect Immune-fluorescence and Western-blot confirmed the expression of interested protein identified by anti-G2 monoclonal antibody. In conclusions, this study successfully constructed the recombinant adenovirus containing Hantaan virus envelope glycoprotein G2, meanwhile obtained the G2 protein, it may lay solid foundation for the structure study of G2 protein and the new vaccine of Hantaan virus.
Adenoviridae
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genetics
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metabolism
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Genetic Vectors
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Green Fluorescent Proteins
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biosynthesis
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genetics
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HEK293 Cells
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HeLa Cells
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Humans
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Kidney
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cytology
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Recombinant Proteins
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biosynthesis
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genetics
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Transfection
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Viral Envelope Proteins
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biosynthesis
;
genetics
8.Surface display of GFP using CotX as a molecular vector on Bacillus subtilis spores.
Qian LI ; Degang NING ; Chundu WU
Chinese Journal of Biotechnology 2010;26(2):264-269
Spore coat proteins, such as CotB, CotC, CotG et al, are able to efficiently display exogenous protein on spore surface for preparing oral vaccines or enzymes. CotX is another structural protein of spore coats of Bacillus subtilis. To investigate whether CotX could carry target protein onto the spore surface, we constructed a recombinant integrative plasmid, designated as pJS749, which carries a recombinant cotX-gfp gene under the control of the cotX promoter. We transformed pJS749 into Bacillus subtilis 168(trp-), an alpha-amylase inactivated mutant DRJS749 was selected and confirmed to be a double crossover integrant, where cotX-gfp fragment was integrated into the chromosome. After induction of spore formation, significant green fluorescence was observed on spore surface of strain DRJS749 under fluorescent microcopy. This suggests that CotX is associated with the outer part of the coat. CotX can therefore be used as a molecular vehicle for spore surface display of exogenous proteins.
Bacillus subtilis
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genetics
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metabolism
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physiology
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Bacterial Proteins
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biosynthesis
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genetics
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Gene Expression Regulation, Bacterial
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Green Fluorescent Proteins
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biosynthesis
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genetics
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Recombinant Fusion Proteins
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biosynthesis
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genetics
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Spores, Bacterial
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genetics
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metabolism
9.Prokaryotic expression and identification of dual-fluorescence fusion proteins of small ubiquitin-like modifier and sentrin-specific protease.
Xiaohui WANG ; Jie GUO ; Jufang WANG ; Shan LI ; Lihua SUN ; Xiaoning WANG ; Jianxin LÜ
Chinese Journal of Biotechnology 2009;25(5):701-707
We cloned genes of four sentrin-specific protease (SENP), three small ubiquitin-like modifiers (SUMO), enhanced cyan fluorescent protein (ECFP) and yellow fluorescent protein (EYFP) by two-step PCR. Then we constructed expression vector B28 for SENP and B13 for ECFP-SUMO-EYFP. The recombinant plasmids were transformed into Escherichia coli BL21 and expression was induced by isopropyl beta-D-thiogalactoside, then recombinant proteins were purified by Ni-NTA agarose column ion-exchange chromatography. The proteins were analyzed with SDS-PAGE and identified with Western blotting. Except that SENP3 catalytic domain (SENP3C) truncated in the C termini and SENP5C expressed in inclusion body, others were expressed as soluble proteins. SDS-PAGE analysis showed that the relative molecular mass of these fusion proteins were consistent with theoretical ones, and the specificity of the fusion proteins were confirmed with Western blotting. The fusion proteins of SENP and ECFP-SUMO-EYFP can be successfully expressed in prokaryotic expression system. It lays the foundation for the fluorescence resonance energy transfer analysis.
Bacterial Proteins
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biosynthesis
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genetics
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Catalytic Domain
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Cysteine Endopeptidases
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biosynthesis
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genetics
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Endopeptidases
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biosynthesis
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genetics
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Escherichia coli
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genetics
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metabolism
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Genetic Vectors
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Green Fluorescent Proteins
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biosynthesis
;
genetics
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Humans
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Luminescent Proteins
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biosynthesis
;
genetics
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Recombinant Fusion Proteins
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biosynthesis
;
genetics
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SUMO-1 Protein
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biosynthesis
;
genetics
10.Construction of rat calcineurin A alpha cDNA recombinant adenovirus vector and its identification.
Xiaomei, SHEN ; Juyan, ZHANG ; Bei, CHENG
Journal of Huazhong University of Science and Technology (Medical Sciences) 2006;26(1):9-12
Rat calcineurin (CaN) A alpha isoform (Ppp3ca) cDNA recombinant adenovirus vector was constructed in order to explore the effect of CaN on the myocardium apoptosis induced by ischemia-reperfusion injury. Total RNA was isolated from the heart of the adult Wistar rat, and Ppp3ca CDS segment of approximate 1.59 kb size was amplified by reverse transcriptional PCR method. Ppp3ca cDNA segment was cloned into pMD18-T Simple vector for sequencing, and the right clone was named T-Ppp3ca. Ppp3ca cDNA segment obtained from T-Ppp3ca was ligated with pShuttle2-IRES-EGFP to construct a recombinant plasmid pShuttle2-Ppp3ca-IRES-EGFP. Ppp3ca-IRES-EGFP expression cassette containing CMV, Ppp3ca-IRES-EGFP and SV40 polyA DNA fragment (3.97 kb) obtained from pShuttle2-Ppp3ca-IRES-EGFP was connected with pAdeno-X backbone sequence to construct a recombinant plasmid pAdeno-Ppp3ca. After being identified by PCR and enzyme digestion, recombinant plasmid pAdeno-Ppp3ca was packaged in HEK293 cells. Supernatant of adenovirus from HEK293 cells was collected after a visible cytopathic effect (CPE) appeared. The DNA of the recombinant adenovirus was extracted with the standard method. The presence of the recombinant adenovirus was verified by PCR. The results showed that sequencing results verified that the PCR product of Ppp3ca gene was identical to GenBank. Agarose electrophoresis showed the bands of recombined plasmid pAdeno-Ppp3ca and the recombinant adenovirus identified by enzyme digestion and PCR were in the right range corresponding with expectation. It was concluded that the recombinant adenovirus carrying rat calcineurin A alpha (Ppp3ca) cDNA as well as a report gene-enhancer green fluorescent protein gene was successfully constructed in this experiment.
Adenoviridae/*genetics
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Calcineurin/*biosynthesis
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Calcineurin/genetics
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Cloning, Molecular
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DNA, Complementary/genetics
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Genetic Vectors/genetics
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Green Fluorescent Proteins/biosynthesis
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Green Fluorescent Proteins/genetics
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Myocardial Reperfusion Injury/*genetics
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Myocardium/chemistry
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Rats, Wistar
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Recombination, Genetic/genetics